RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 PORCNQ9H237 461 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 CERS4Q9HA82 394 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 CWC22Q9HCG8 908 aaKnown RBP4.17□□□□□ -1.74
CHD1-211ENST00000514344 TXNRD2Q9NNW7 524 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 FLRT1Q9NZU1 646 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 RPAP1Q9BWH6 1393 aaPredicted RBP4.17□□□□□ -1.74
CHD1-211ENST00000514344 ATRXP46100 2492 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 PHF20L1A8MW92 1017 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 CLTBP09497 229 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 ACRP10323 421 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 HIBADHP31937 336 aaKnown RBP4.17□□□□□ -1.74
CHD1-211ENST00000514344 RGS2P41220 211 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 SPP2Q13103 211 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 ZNF594Q96JF6 807 aaPredicted RBP4.17□□□□□ -1.74
CHD1-211ENST00000514344 PAGR1Q9BTK6 254 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 TMEM39AQ9NV64 488 aa4.17□□□□□ -1.74
CHD1-211ENST00000514344 LRRFIP2Q9Y608 721 aaKnown RBP4.17□□□□□ -1.74
CHD1-211ENST00000514344 PHIPQ8WWQ0 1821 aa4.16□□□□□ -1.74
CHD1-211ENST00000514344 ANKRD18BA2A2Z9 1011 aa4.16□□□□□ -1.74
CHD1-211ENST00000514344 MYOGP15173 224 aa4.16□□□□□ -1.74
CHD1-211ENST00000514344 PPP2R1AP30153 589 aa4.16□□□□□ -1.74
CHD1-211ENST00000514344 IRX3P78415 501 aaPredicted RBP4.16□□□□□ -1.74
CHD1-211ENST00000514344 FKBP1CQ5VVH2 108 aa4.16□□□□□ -1.74
CHD1-211ENST00000514344 DUSP27Q5VZP5 1158 aa4.16□□□□□ -1.74
CHD1-211ENST00000514344 PPP2R2DQ66LE6 453 aa4.16□□□□□ -1.74
CHD1-211ENST00000514344 C15orf52Q6ZUT6 534 aaKnown RBP4.16□□□□□ -1.74
CHD1-211ENST00000514344 GPR142Q7Z601 462 aa4.16□□□□□ -1.74
CHD1-211ENST00000514344 HERVK_113Q902F9 699 aa4.16□□□□□ -1.74
CHD1-211ENST00000514344 FAM84BQ96KN1 310 aaPredicted RBP4.16□□□□□ -1.74
CHD1-211ENST00000514344 APBA2Q99767 749 aa4.16□□□□□ -1.74
CHD1-211ENST00000514344 MSRAQ9UJ68 235 aa4.16□□□□□ -1.74
CHD1-211ENST00000514344 CACNA1HO95180 2353 aa4.16□□□□□ -1.74
CHD1-211ENST00000514344 GBF1Q92538 1859 aa4.16□□□□□ -1.74
CHD1-211ENST00000514344 NCOR2Q9Y618 2525 aa4.16□□□□□ -1.74
CHD1-211ENST00000514344 PI4KAP2A4QPH2 592 aa4.16□□□□□ -1.74
CHD1-211ENST00000514344 FAM196BA6NMK8 535 aa4.16□□□□□ -1.74
CHD1-211ENST00000514344 GFRA3O60609 400 aa4.16□□□□□ -1.74
CHD1-211ENST00000514344 MSCO60682 206 aa4.16□□□□□ -1.74
CHD1-211ENST00000514344 RABGGTBP53611 331 aa4.16□□□□□ -1.74
CHD1-211ENST00000514344 DIXDC1Q155Q3 683 aa4.16□□□□□ -1.74
CHD1-211ENST00000514344 Q3C1V9 767 aa4.16□□□□□ -1.74
CHD1-211ENST00000514344 MFSD14CQ5VZR4 134 aa4.16□□□□□ -1.74
CHD1-211ENST00000514344 HFE2Q6ZVN8 426 aa4.16□□□□□ -1.74
CHD1-211ENST00000514344 PI4KAP1Q8N8J0 262 aa4.16□□□□□ -1.74
CHD1-211ENST00000514344 ARRDC4Q8NCT1 418 aa4.16□□□□□ -1.74
CHD1-211ENST00000514344 HLA-CQ95604 372 aa4.16□□□□□ -1.74
CHD1-211ENST00000514344 PHF12Q96QT6 1004 aa4.16□□□□□ -1.74
CHD1-211ENST00000514344 FAM86C1Q9NVL1 165 aa4.16□□□□□ -1.74
CHD1-211ENST00000514344 YBX2Q9Y2T7 364 aaKnown RBP4.16□□□□□ -1.74
CHD1-211ENST00000514344 CSF2RAP15509 400 aa4.15□□□□□ -1.74
CHD1-211ENST00000514344 NEXNQ0ZGT2 675 aa4.15□□□□□ -1.74
CHD1-211ENST00000514344 TRIM26Q12899 539 aaPredicted RBP4.15□□□□□ -1.74
CHD1-211ENST00000514344 IFIT5Q13325 482 aaKnown RBP4.15□□□□□ -1.74
CHD1-211ENST00000514344 LDHAL6AQ6ZMR3 332 aa4.15□□□□□ -1.74
CHD1-211ENST00000514344 C16orf59Q7L2K0 433 aa4.15□□□□□ -1.74
CHD1-211ENST00000514344 TRMT44Q8IYL2 757 aaKnown RBP4.15□□□□□ -1.74
CHD1-211ENST00000514344 GJD3Q8N144 294 aa4.15□□□□□ -1.74
CHD1-211ENST00000514344 SLC44A5Q8NCS7 719 aa4.15□□□□□ -1.74
CHD1-211ENST00000514344 GPRC5AQ8NFJ5 357 aa4.15□□□□□ -1.74
CHD1-211ENST00000514344 EDC3Q96F86 508 aaKnown RBP4.15□□□□□ -1.74
CHD1-211ENST00000514344 CNNM1Q9NRU3 951 aa4.15□□□□□ -1.74
CHD1-211ENST00000514344 FAM198AQ9UFP1 575 aa4.15□□□□□ -1.74
CHD1-211ENST00000514344 CHD6Q8TD26 2715 aa4.15□□□□□ -1.74
CHD1-211ENST00000514344 ANKRD11Q6UB99 2663 aaPredicted RBP4.15□□□□□ -1.74
CHD1-211ENST00000514344 FAM186AA6NE01 2351 aa4.15□□□□□ -1.74
CHD1-211ENST00000514344 RBAK-RBAKDNI3L0D1 243 aa4.15□□□□□ -1.75
CHD1-211ENST00000514344 CHL1O00533 1208 aa4.15□□□□□ -1.75
CHD1-211ENST00000514344 GTPBP6O43824 516 aaPredicted RBP4.15□□□□□ -1.75
CHD1-211ENST00000514344 DDX58O95786 925 aaKnown RBP4.15□□□□□ -1.75
CHD1-211ENST00000514344 HDLBPQ00341 1268 aaKnown RBP4.15□□□□□ -1.75
CHD1-211ENST00000514344 ATP2B2Q01814 1243 aa4.15□□□□□ -1.75
CHD1-211ENST00000514344 SNX17Q15036 470 aa4.15□□□□□ -1.75
CHD1-211ENST00000514344 TAF7LQ5H9L4 462 aa4.15□□□□□ -1.75
CHD1-211ENST00000514344 FAM47AQ5JRC9 791 aa4.15□□□□□ -1.75
CHD1-211ENST00000514344 TMEM240Q5SV17 173 aa4.15□□□□□ -1.75
CHD1-211ENST00000514344 CDC42EP5Q6NZY7 148 aa4.15□□□□□ -1.75
CHD1-211ENST00000514344 ZNF365Q70YC5 407 aa4.15□□□□□ -1.75
CHD1-211ENST00000514344 PROCA1Q8NCQ7 364 aaPredicted RBP4.15□□□□□ -1.75
CHD1-211ENST00000514344 TRPV1Q8NER1 839 aa4.15□□□□□ -1.75
CHD1-211ENST00000514344 A0A1B0GUL6 1792 aa4.15□□□□□ -1.75
CHD1-211ENST00000514344 UTYO14607 1347 aa4.14□□□□□ -1.75
CHD1-211ENST00000514344 MYBBP1AQ9BQG0 1328 aaKnown RBP4.14□□□□□ -1.75
CHD1-211ENST00000514344 NEURL1BA8MQ27 555 aa4.14□□□□□ -1.75
CHD1-211ENST00000514344 MAPK4P31152 587 aa4.14□□□□□ -1.75
CHD1-211ENST00000514344 HERVK_113P62684 666 aa4.14□□□□□ -1.75
CHD1-211ENST00000514344 ERVK-9P63128 1117 aa4.14□□□□□ -1.75
CHD1-211ENST00000514344 ERVK-24P63145 666 aa4.14□□□□□ -1.75
CHD1-211ENST00000514344 PABPC4Q13310 644 aaKnown RBP eCLIP4.14□□□□□ -1.75
CHD1-211ENST00000514344 RAB30Q15771 203 aa4.14□□□□□ -1.75
CHD1-211ENST00000514344 MORN1Q5T089 497 aa4.14□□□□□ -1.75
CHD1-211ENST00000514344 OTOP2Q7RTS6 562 aa4.14□□□□□ -1.75
CHD1-211ENST00000514344 PLEKHH3Q7Z736 793 aa4.14□□□□□ -1.75
CHD1-211ENST00000514344 USP6NLQ92738 828 aa4.14□□□□□ -1.75
CHD1-211ENST00000514344 PPP1R12CQ9BZL4 782 aa4.14□□□□□ -1.75
CHD1-211ENST00000514344 BABAM1Q9NWV8 329 aa4.14□□□□□ -1.75
CHD1-211ENST00000514344 MORF4L1Q9UBU8 362 aa4.14□□□□□ -1.75
CHD1-211ENST00000514344 COG5Q9UP83 839 aa4.14□□□□□ -1.75
CHD1-211ENST00000514344 MTCH2Q9Y6C9 303 aa4.14□□□□□ -1.75
CHD1-211ENST00000514344 KIAA0355O15063 1070 aa4.14□□□□□ -1.75
CHD1-211ENST00000514344 CTNND1O60716 968 aaKnown RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms