RNA–Protein interactions for RNA: ENST00000513128.5

GYPB-213, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-213ENST00000513128 ZDHHC15Q96MV8 337 aa7.36□□□□□ -1.23
GYPB-213ENST00000513128 PCDH10Q9P2E7 1040 aa7.36□□□□□ -1.23
GYPB-213ENST00000513128 AK9Q5TCS8 1911 aa7.36□□□□□ -1.23
GYPB-213ENST00000513128 KIAA0100Q14667 2235 aaKnown RBP7.35□□□□□ -1.23
GYPB-213ENST00000513128 TRIM6-TRIM34B2RNG4 842 aa7.35□□□□□ -1.23
GYPB-213ENST00000513128 BTBD19C9JJ37 291 aa7.35□□□□□ -1.23
GYPB-213ENST00000513128 FRAT2O75474 233 aaPredicted RBP7.35□□□□□ -1.23
GYPB-213ENST00000513128 HMGB1P09429 215 aaKnown RBP7.35□□□□□ -1.23
GYPB-213ENST00000513128 CDK11BP21127 795 aaKnown RBP7.35□□□□□ -1.23
GYPB-213ENST00000513128 INPP5BP32019 993 aa7.35□□□□□ -1.23
GYPB-213ENST00000513128 TNNI2P48788 182 aa7.35□□□□□ -1.23
GYPB-213ENST00000513128 CLCN6P51797 869 aa7.35□□□□□ -1.23
GYPB-213ENST00000513128 GTF2A2P52657 109 aa7.35□□□□□ -1.23
GYPB-213ENST00000513128 NFIAQ12857 509 aa7.35□□□□□ -1.23
GYPB-213ENST00000513128 CRTC2Q53ET0 693 aaPredicted RBP7.35□□□□□ -1.23
GYPB-213ENST00000513128 CAVIN4Q5BKX8 364 aa7.35□□□□□ -1.23
GYPB-213ENST00000513128 ARSIQ5FYB1 569 aa7.35□□□□□ -1.23
GYPB-213ENST00000513128 INTS3Q68E01 1043 aaKnown RBP7.35□□□□□ -1.23
GYPB-213ENST00000513128 USP17L2Q6R6M4 530 aa7.35□□□□□ -1.23
GYPB-213ENST00000513128 FAM83AQ86UY5 434 aa7.35□□□□□ -1.23
GYPB-213ENST00000513128 ZFPM1Q8IX07 1006 aa7.35□□□□□ -1.23
GYPB-213ENST00000513128 TBC1D22AQ8WUA7 517 aa7.35□□□□□ -1.23
GYPB-213ENST00000513128 ZNF333Q96JL9 665 aa7.35□□□□□ -1.23
GYPB-213ENST00000513128 WRNIP1Q96S55 665 aa7.35□□□□□ -1.23
GYPB-213ENST00000513128 ZFYVE28Q9HCC9 887 aa7.35□□□□□ -1.23
GYPB-213ENST00000513128 CSADQ9Y600 493 aa7.35□□□□□ -1.23
GYPB-213ENST00000513128 MGAMO43451 1857 aa7.34□□□□□ -1.23
GYPB-213ENST00000513128 DOCK2Q92608 1830 aa7.34□□□□□ -1.23
GYPB-213ENST00000513128 PTPRCP08575 1304 aa7.34□□□□□ -1.23
GYPB-213ENST00000513128 PPP1R3GB7ZBB8 358 aa7.34□□□□□ -1.23
GYPB-213ENST00000513128 EYA2O00167 538 aa7.34□□□□□ -1.23
GYPB-213ENST00000513128 TLR2O60603 784 aa7.34□□□□□ -1.23
GYPB-213ENST00000513128 SLURP2P0DP57 97 aa7.34□□□□□ -1.23
GYPB-213ENST00000513128 ARID4AP29374 1257 aaPredicted RBP7.34□□□□□ -1.23
GYPB-213ENST00000513128 PRDX5P30044 214 aa7.34□□□□□ -1.23
GYPB-213ENST00000513128 LACTBP83111 547 aaPredicted RBP7.34□□□□□ -1.23
GYPB-213ENST00000513128 SLFN5Q08AF3 891 aa7.34□□□□□ -1.23
GYPB-213ENST00000513128 TCP10Q12799 353 aa7.34□□□□□ -1.23
GYPB-213ENST00000513128 MOGSQ13724 837 aa7.34□□□□□ -1.23
GYPB-213ENST00000513128 PUM3Q15397 648 aaKnown RBP7.34□□□□□ -1.23
GYPB-213ENST00000513128 HABP4Q5JVS0 413 aaKnown RBP7.34□□□□□ -1.23
GYPB-213ENST00000513128 FKBP1CQ5VVH2 108 aa7.34□□□□□ -1.23
GYPB-213ENST00000513128 CDC42EP5Q6NZY7 148 aa7.34□□□□□ -1.23
GYPB-213ENST00000513128 HHIPL2Q6UWX4 724 aa7.34□□□□□ -1.23
GYPB-213ENST00000513128 ERO1BQ86YB8 467 aa7.34□□□□□ -1.23
GYPB-213ENST00000513128 DEPDC4Q8N2C3 294 aa7.34□□□□□ -1.23
GYPB-213ENST00000513128 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.34□□□□□ -1.23
GYPB-213ENST00000513128 FAM174AQ8TBP5 190 aa7.34□□□□□ -1.23
GYPB-213ENST00000513128 SH3TC2Q8TF17 1288 aa7.34□□□□□ -1.23
GYPB-213ENST00000513128 MRIQ9BWK5 157 aa7.34□□□□□ -1.23
GYPB-213ENST00000513128 DAGLAQ9Y4D2 1042 aa7.34□□□□□ -1.23
GYPB-213ENST00000513128 MYH2Q9UKX2 1941 aa7.34□□□□□ -1.23
GYPB-213ENST00000513128 PHIPQ8WWQ0 1821 aa7.34□□□□□ -1.24
GYPB-213ENST00000513128 RPAP1Q9BWH6 1393 aaPredicted RBP7.33□□□□□ -1.24
GYPB-213ENST00000513128 KIF16BQ96L93 1317 aa7.33□□□□□ -1.24
GYPB-213ENST00000513128 ADGRA2Q96PE1 1338 aa7.33□□□□□ -1.24
GYPB-213ENST00000513128 PTPRFP10586 1907 aa7.33□□□□□ -1.24
GYPB-213ENST00000513128 USP17L15C9J2P7 530 aa7.33□□□□□ -1.24
GYPB-213ENST00000513128 USP17L10C9JJH3 530 aa7.33□□□□□ -1.24
GYPB-213ENST00000513128 USP17L13C9JLJ4 530 aa7.33□□□□□ -1.24
GYPB-213ENST00000513128 USP17L12C9JPN9 530 aa7.33□□□□□ -1.24
GYPB-213ENST00000513128 USP17L11C9JVI0 530 aa7.33□□□□□ -1.24
GYPB-213ENST00000513128 USP17L21D6R901 530 aa7.33□□□□□ -1.24
GYPB-213ENST00000513128 USP17L18D6R9N7 530 aa7.33□□□□□ -1.24
GYPB-213ENST00000513128 USP17L22D6RA61 530 aa7.33□□□□□ -1.24
GYPB-213ENST00000513128 USP17L17D6RBQ6 530 aa7.33□□□□□ -1.24
GYPB-213ENST00000513128 USP17L19D6RCP7 530 aa7.33□□□□□ -1.24
GYPB-213ENST00000513128 USP17L20D6RJB6 530 aa7.33□□□□□ -1.24
GYPB-213ENST00000513128 HAX1O00165 279 aa7.33□□□□□ -1.24
GYPB-213ENST00000513128 IFIT1P09914 478 aaKnown RBP7.33□□□□□ -1.24
GYPB-213ENST00000513128 FBXO45P0C2W1 286 aa7.33□□□□□ -1.24
GYPB-213ENST00000513128 CETPP11597 493 aa7.33□□□□□ -1.24
GYPB-213ENST00000513128 ERCC3P19447 782 aa7.33□□□□□ -1.24
GYPB-213ENST00000513128 USP17L24Q0WX57 530 aa7.33□□□□□ -1.24
GYPB-213ENST00000513128 PPIL2Q13356 520 aa7.33□□□□□ -1.24
GYPB-213ENST00000513128 SNAPC2Q13487 334 aa7.33□□□□□ -1.24
GYPB-213ENST00000513128 SLC9C1Q4G0N8 1177 aa7.33□□□□□ -1.24
GYPB-213ENST00000513128 C17orf99Q6UX52 265 aa7.33□□□□□ -1.24
GYPB-213ENST00000513128 GIPC2Q8TF65 315 aa7.33□□□□□ -1.24
GYPB-213ENST00000513128 LPIN2Q92539 896 aa7.33□□□□□ -1.24
GYPB-213ENST00000513128 SIL1Q9H173 461 aa7.33□□□□□ -1.24
GYPB-213ENST00000513128 TMOD2Q9NZR1 351 aa7.33□□□□□ -1.24
GYPB-213ENST00000513128 CPA4Q9UI42 421 aa7.33□□□□□ -1.24
GYPB-213ENST00000513128 ZNF112Q9UJU3 913 aa7.33□□□□□ -1.24
GYPB-213ENST00000513128 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.33□□□□□ -1.24
GYPB-213ENST00000513128 ATRNL1Q5VV63 1379 aa7.33□□□□□ -1.24
GYPB-213ENST00000513128 USP17L5A8MUK1 530 aa7.32□□□□□ -1.24
GYPB-213ENST00000513128 SKIP12755 728 aa7.32□□□□□ -1.24
GYPB-213ENST00000513128 SLC5A1P13866 664 aa7.32□□□□□ -1.24
GYPB-213ENST00000513128 ADORA1P30542 326 aa7.32□□□□□ -1.24
GYPB-213ENST00000513128 PHKA1P46020 1223 aa7.32□□□□□ -1.24
GYPB-213ENST00000513128 PPATQ06203 517 aa7.32□□□□□ -1.24
GYPB-213ENST00000513128 NR1H3Q13133 447 aa7.32□□□□□ -1.24
GYPB-213ENST00000513128 MTFR1Q15390 333 aa7.32□□□□□ -1.24
GYPB-213ENST00000513128 PROX2Q3B8N5 592 aa7.32□□□□□ -1.24
GYPB-213ENST00000513128 SH3BP5LQ7L8J4 393 aa7.32□□□□□ -1.24
GYPB-213ENST00000513128 NPAS4Q8IUM7 802 aa7.32□□□□□ -1.24
GYPB-213ENST00000513128 WDR66Q8TBY9 1149 aa7.32□□□□□ -1.24
GYPB-213ENST00000513128 FAM151AQ8WW52 585 aa7.32□□□□□ -1.24
GYPB-213ENST00000513128 TRIM47Q96LD4 638 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms