RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 ALBP02768 609 aa10.1□□□□□ -0.79
RFC1-214ENST00000512726 ZNF143P52747 638 aaPredicted RBP10.1□□□□□ -0.79
RFC1-214ENST00000512726 NLRP12P59046 1061 aa10.1□□□□□ -0.79
RFC1-214ENST00000512726 MAP4K3Q8IVH8 894 aa10.1□□□□□ -0.79
RFC1-214ENST00000512726 FAM13CQ8NE31 585 aa10.1□□□□□ -0.79
RFC1-214ENST00000512726 CHAC2Q8WUX2 184 aa10.1□□□□□ -0.79
RFC1-214ENST00000512726 ACSF2Q96CM8 615 aaPredicted RBP10.1□□□□□ -0.79
RFC1-214ENST00000512726 HIF3AQ9Y2N7 669 aa10.1□□□□□ -0.79
RFC1-214ENST00000512726 LOC100289279A0A1B0GTE1 492 aa10.09□□□□□ -0.79
RFC1-214ENST00000512726 AOC2O75106 756 aa10.09□□□□□ -0.79
RFC1-214ENST00000512726 ERVK-24P63145 666 aa10.09□□□□□ -0.79
RFC1-214ENST00000512726 RING1Q06587 406 aa10.09□□□□□ -0.79
RFC1-214ENST00000512726 FERMT3Q86UX7 667 aa10.09□□□□□ -0.79
RFC1-214ENST00000512726 MCATQ8IVS2 390 aaKnown RBP10.09□□□□□ -0.79
RFC1-214ENST00000512726 DHX37Q8IY37 1157 aaKnown RBP10.09□□□□□ -0.79
RFC1-214ENST00000512726 IPO9Q96P70 1041 aaKnown RBP10.09□□□□□ -0.79
RFC1-214ENST00000512726 CEP89Q96ST8 783 aa10.09□□□□□ -0.79
RFC1-214ENST00000512726 RAD18Q9NS91 495 aa10.09□□□□□ -0.79
RFC1-214ENST00000512726 SYNGAP1Q96PV0 1343 aa10.08□□□□□ -0.8
RFC1-214ENST00000512726 FANCGO15287 622 aa10.08□□□□□ -0.8
RFC1-214ENST00000512726 EPXP11678 715 aa10.08□□□□□ -0.8
RFC1-214ENST00000512726 MYCLP1P12525 358 aaPredicted RBP10.08□□□□□ -0.8
RFC1-214ENST00000512726 SV2CQ496J9 727 aa10.08□□□□□ -0.8
RFC1-214ENST00000512726 MSL1Q68DK7 614 aa10.08□□□□□ -0.8
RFC1-214ENST00000512726 SLFN12Q8IYM2 578 aa10.08□□□□□ -0.8
RFC1-214ENST00000512726 PHACTR4Q8IZ21 702 aa10.08□□□□□ -0.8
RFC1-214ENST00000512726 POLR3GLQ9BT43 218 aa10.08□□□□□ -0.8
RFC1-214ENST00000512726 WDR18Q9BV38 432 aa10.08□□□□□ -0.8
RFC1-214ENST00000512726 HOMER2Q9NSB8 354 aa10.08□□□□□ -0.8
RFC1-214ENST00000512726 PCDHGC5Q9Y5F6 944 aa10.08□□□□□ -0.8
RFC1-214ENST00000512726 IGF1RP08069 1367 aa10.08□□□□□ -0.8
RFC1-214ENST00000512726 RFPL3O75679 317 aa10.07□□□□□ -0.8
RFC1-214ENST00000512726 POLR2BP30876 1174 aaKnown RBP10.07□□□□□ -0.8
RFC1-214ENST00000512726 PMS1P54277 932 aaKnown RBP10.07□□□□□ -0.8
RFC1-214ENST00000512726 ID3Q02535 119 aa10.07□□□□□ -0.8
RFC1-214ENST00000512726 PABPC4Q13310 644 aaKnown RBP eCLIP10.07□□□□□ -0.8
RFC1-214ENST00000512726 HSP90AB2PQ58FF8 381 aa10.07□□□□□ -0.8
RFC1-214ENST00000512726 PPM1JQ5JR12 505 aa10.07□□□□□ -0.8
RFC1-214ENST00000512726 HID1Q8IV36 788 aa10.07□□□□□ -0.8
RFC1-214ENST00000512726 TMEM87BQ96K49 555 aa10.07□□□□□ -0.8
RFC1-214ENST00000512726 CDC6Q99741 560 aa10.07□□□□□ -0.8
RFC1-214ENST00000512726 CHPF2Q9P2E5 772 aa10.07□□□□□ -0.8
RFC1-214ENST00000512726 TJP2Q9UDY2 1190 aa10.07□□□□□ -0.8
RFC1-214ENST00000512726 G3BP2Q9UN86 482 aaKnown RBP10.07□□□□□ -0.8
RFC1-214ENST00000512726 ANKRD34BA5PLL1 514 aa10.06□□□□□ -0.8
RFC1-214ENST00000512726 M0R082 166 aa10.06□□□□□ -0.8
RFC1-214ENST00000512726 STAT3P40763 770 aa10.06□□□□□ -0.8
RFC1-214ENST00000512726 SETDB1Q15047 1291 aa10.06□□□□□ -0.8
RFC1-214ENST00000512726 CT47A1Q5JQC4 288 aaPredicted RBP10.06□□□□□ -0.8
RFC1-214ENST00000512726 ZBTB37Q5TC79 503 aa10.06□□□□□ -0.8
RFC1-214ENST00000512726 SLC6A19Q695T7 634 aa10.06□□□□□ -0.8
RFC1-214ENST00000512726 THNSL2Q86YJ6 484 aa10.06□□□□□ -0.8
RFC1-214ENST00000512726 PRPF38AQ8NAV1 312 aaKnown RBP10.06□□□□□ -0.8
RFC1-214ENST00000512726 ZNF417Q8TAU3 575 aa10.06□□□□□ -0.8
RFC1-214ENST00000512726 ZNF587Q96SQ5 575 aaPredicted RBP10.06□□□□□ -0.8
RFC1-214ENST00000512726 KIF2CQ99661 725 aa10.06□□□□□ -0.8
RFC1-214ENST00000512726 APBA2Q99767 749 aa10.06□□□□□ -0.8
RFC1-214ENST00000512726 CAAP1Q9H8G2 361 aa10.06□□□□□ -0.8
RFC1-214ENST00000512726 ATP8A1Q9Y2Q0 1164 aa10.06□□□□□ -0.8
RFC1-214ENST00000512726 IRS4O14654 1257 aaPredicted RBP10.05□□□□□ -0.8
RFC1-214ENST00000512726 RGS13O14921 159 aa10.05□□□□□ -0.8
RFC1-214ENST00000512726 PLD2O14939 933 aa10.05□□□□□ -0.8
RFC1-214ENST00000512726 SOX5P35711 763 aa10.05□□□□□ -0.8
RFC1-214ENST00000512726 HSP90AA2PQ14568 343 aaPredicted RBP10.05□□□□□ -0.8
RFC1-214ENST00000512726 MRPL41Q8IXM3 137 aaKnown RBP10.05□□□□□ -0.8
RFC1-214ENST00000512726 ZNF507Q8TCN5 953 aa10.05□□□□□ -0.8
RFC1-214ENST00000512726 DCAF11Q8TEB1 546 aa10.05□□□□□ -0.8
RFC1-214ENST00000512726 SLC6A18Q96N87 628 aa10.05□□□□□ -0.8
RFC1-214ENST00000512726 DHRS4Q9BTZ2 278 aa10.05□□□□□ -0.8
RFC1-214ENST00000512726 SUCOQ9UBS9 1254 aaKnown RBP10.05□□□□□ -0.8
RFC1-214ENST00000512726 TRAV20A0A0B4J274 112 aa10.04□□□□□ -0.8
RFC1-214ENST00000512726 A0A1W2PQU0 124 aa10.04□□□□□ -0.8
RFC1-214ENST00000512726 L1CAMP32004 1257 aa10.04□□□□□ -0.8
RFC1-214ENST00000512726 GBP1P32455 592 aa10.04□□□□□ -0.8
RFC1-214ENST00000512726 CD68P34810 354 aaPredicted RBP10.04□□□□□ -0.8
RFC1-214ENST00000512726 CBX2Q14781 532 aaPredicted RBP10.04□□□□□ -0.8
RFC1-214ENST00000512726 FNDC3BQ53EP0 1204 aaKnown RBP10.04□□□□□ -0.8
RFC1-214ENST00000512726 FOXB2Q5VYV0 432 aa10.04□□□□□ -0.8
RFC1-214ENST00000512726 GALNT11Q8NCW6 608 aa10.04□□□□□ -0.8
RFC1-214ENST00000512726 SMARCC1Q92922 1105 aaPredicted RBP10.04□□□□□ -0.8
RFC1-214ENST00000512726 KISS1RQ969F8 398 aaPredicted RBP10.04□□□□□ -0.8
RFC1-214ENST00000512726 RUSC1Q9BVN2 902 aa10.04□□□□□ -0.8
RFC1-214ENST00000512726 NCOA5Q9HCD5 579 aaKnown RBP10.04□□□□□ -0.8
RFC1-214ENST00000512726 LRP2BPQ9P2M1 347 aa10.04□□□□□ -0.8
RFC1-214ENST00000512726 ARID4BQ4LE39 1312 aaPredicted RBP10.04□□□□□ -0.8
RFC1-214ENST00000512726 TP53P04637 393 aaPredicted RBP10.03□□□□□ -0.8
RFC1-214ENST00000512726 EXOSC6Q5RKV6 272 aaKnown RBP10.03□□□□□ -0.8
RFC1-214ENST00000512726 HEATR6Q6AI08 1181 aaKnown RBP10.03□□□□□ -0.8
RFC1-214ENST00000512726 TMEM192Q8IY95 271 aa10.03□□□□□ -0.8
RFC1-214ENST00000512726 EXOC2Q96KP1 924 aa10.03□□□□□ -0.8
RFC1-214ENST00000512726 CCDC74BQ96LY2 380 aa10.03□□□□□ -0.8
RFC1-214ENST00000512726 PRDM6Q9NQX0 595 aa10.03□□□□□ -0.8
RFC1-214ENST00000512726 ARHGEF4Q9NR80 690 aa10.03□□□□□ -0.8
RFC1-214ENST00000512726 MRPS23Q9Y3D9 190 aaKnown RBP10.03□□□□□ -0.8
RFC1-214ENST00000512726 A0A087X0B3 334 aa10.02□□□□□ -0.81
RFC1-214ENST00000512726 TRBV23-1A0A0A0MS06 115 aa10.02□□□□□ -0.81
RFC1-214ENST00000512726 TM4SF5O14894 197 aa10.02□□□□□ -0.81
RFC1-214ENST00000512726 DDX3YO15523 660 aaKnown RBP10.02□□□□□ -0.81
RFC1-214ENST00000512726 PDE8AO60658 829 aa10.02□□□□□ -0.81
RFC1-214ENST00000512726 ADAM11O75078 769 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms