RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 NUDT12Q9BQG2 462 aa15.35■□□□□ 0.05
VEGFA-216ENST00000512683 SNRKQ9NRH2 765 aa15.35■□□□□ 0.05
VEGFA-216ENST00000512683 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.35■□□□□ 0.05
VEGFA-216ENST00000512683 TAOK2Q9UL54 1235 aa15.35■□□□□ 0.05
VEGFA-216ENST00000512683 FLT1P17948 1338 aa15.35■□□□□ 0.05
VEGFA-216ENST00000512683 USP17L2Q6R6M4 530 aa15.34■□□□□ 0.05
VEGFA-216ENST00000512683 TTC6Q86TZ1 520 aa15.34■□□□□ 0.05
VEGFA-216ENST00000512683 ERC1Q8IUD2 1116 aa15.34■□□□□ 0.05
VEGFA-216ENST00000512683 MAPKAPK5Q8IW41 473 aa15.34■□□□□ 0.05
VEGFA-216ENST00000512683 FTSJ3Q8IY81 847 aaKnown RBP15.34■□□□□ 0.05
VEGFA-216ENST00000512683 MYO5AQ9Y4I1 1855 aaKnown RBP15.33■□□□□ 0.05
VEGFA-216ENST00000512683 CYP7A1P22680 504 aa15.33■□□□□ 0.04
VEGFA-216ENST00000512683 ZAP70P43403 619 aa15.33■□□□□ 0.04
VEGFA-216ENST00000512683 USP14P54578 494 aa15.33■□□□□ 0.04
VEGFA-216ENST00000512683 HERVK_113P62684 666 aa15.33■□□□□ 0.04
VEGFA-216ENST00000512683 MAP3K12Q12852 859 aa15.33■□□□□ 0.04
VEGFA-216ENST00000512683 MTMR2Q13614 643 aa15.33■□□□□ 0.04
VEGFA-216ENST00000512683 HSP90AB4PQ58FF6 505 aa15.33■□□□□ 0.04
VEGFA-216ENST00000512683 TATDN1Q6P1N9 297 aa15.33■□□□□ 0.04
VEGFA-216ENST00000512683 PAWRQ96IZ0 340 aaKnown RBP15.33■□□□□ 0.04
VEGFA-216ENST00000512683 C12orf42Q96LP6 360 aa15.33■□□□□ 0.04
VEGFA-216ENST00000512683 NBPF3Q9H094 633 aa15.33■□□□□ 0.04
VEGFA-216ENST00000512683 EHD4Q9H223 541 aa15.33■□□□□ 0.04
VEGFA-216ENST00000512683 PALD1Q9ULE6 856 aa15.33■□□□□ 0.04
VEGFA-216ENST00000512683 TRIOBPQ9H2D6 2365 aa15.32■□□□□ 0.04
VEGFA-216ENST00000512683 GLRX3O76003 335 aaKnown RBP15.32■□□□□ 0.04
VEGFA-216ENST00000512683 BMP8BP34820 402 aa15.32■□□□□ 0.04
VEGFA-216ENST00000512683 PDE3AQ14432 1141 aa15.32■□□□□ 0.04
VEGFA-216ENST00000512683 MAP3K21Q5TCX8 1036 aa15.32■□□□□ 0.04
VEGFA-216ENST00000512683 CCAR1Q8IX12 1150 aaKnown RBP15.32■□□□□ 0.04
VEGFA-216ENST00000512683 DNAJC18Q9H819 358 aa15.32■□□□□ 0.04
VEGFA-216ENST00000512683 PIH1D3Q9NQM4 214 aaKnown RBP15.32■□□□□ 0.04
VEGFA-216ENST00000512683 RBPJLQ9UBG7 517 aa15.32■□□□□ 0.04
VEGFA-216ENST00000512683 DBNLQ9UJU6 430 aaKnown RBP15.32■□□□□ 0.04
VEGFA-216ENST00000512683 OGDHLQ9ULD0 1010 aa15.32■□□□□ 0.04
VEGFA-216ENST00000512683 ZBTB21Q9ULJ3 1066 aa15.32■□□□□ 0.04
VEGFA-216ENST00000512683 MS4A1P11836 297 aa15.31■□□□□ 0.04
VEGFA-216ENST00000512683 CCNA1P78396 465 aa15.31■□□□□ 0.04
VEGFA-216ENST00000512683 TTF1Q15361 905 aaPredicted RBP15.31■□□□□ 0.04
VEGFA-216ENST00000512683 ADGRA1Q86SQ6 560 aa15.31■□□□□ 0.04
VEGFA-216ENST00000512683 EAF2Q96CJ1 260 aaPredicted RBP15.31■□□□□ 0.04
VEGFA-216ENST00000512683 C1orf115Q9H7X2 142 aa15.31■□□□□ 0.04
VEGFA-216ENST00000512683 SERPINB13Q9UIV8 391 aa15.31■□□□□ 0.04
VEGFA-216ENST00000512683 RABGAP1Q9Y3P9 1069 aa15.31■□□□□ 0.04
VEGFA-216ENST00000512683 DOCK2Q92608 1830 aa15.31■□□□□ 0.04
VEGFA-216ENST00000512683 USP17L15C9J2P7 530 aa15.3■□□□□ 0.04
VEGFA-216ENST00000512683 USP17L13C9JLJ4 530 aa15.3■□□□□ 0.04
VEGFA-216ENST00000512683 USP17L11C9JVI0 530 aa15.3■□□□□ 0.04
VEGFA-216ENST00000512683 USP17L18D6R9N7 530 aa15.3■□□□□ 0.04
VEGFA-216ENST00000512683 USP17L22D6RA61 530 aa15.3■□□□□ 0.04
VEGFA-216ENST00000512683 USP17L17D6RBQ6 530 aa15.3■□□□□ 0.04
VEGFA-216ENST00000512683 USP17L19D6RCP7 530 aa15.3■□□□□ 0.04
VEGFA-216ENST00000512683 USP17L20D6RJB6 530 aa15.3■□□□□ 0.04
VEGFA-216ENST00000512683 IDH1O75874 414 aaKnown RBP15.3■□□□□ 0.04
VEGFA-216ENST00000512683 RGS2P41220 211 aa15.3■□□□□ 0.04
VEGFA-216ENST00000512683 USP5P45974 858 aa15.3■□□□□ 0.04
VEGFA-216ENST00000512683 ERVK-9P63128 1117 aa15.3■□□□□ 0.04
VEGFA-216ENST00000512683 ERVK-24P63145 666 aa15.3■□□□□ 0.04
VEGFA-216ENST00000512683 USP17L24Q0WX57 530 aa15.3■□□□□ 0.04
VEGFA-216ENST00000512683 GPR153Q6NV75 609 aa15.3■□□□□ 0.04
VEGFA-216ENST00000512683 ITPRIPQ8IWB1 547 aa15.3■□□□□ 0.04
VEGFA-216ENST00000512683 USP6NLQ92738 828 aa15.3■□□□□ 0.04
VEGFA-216ENST00000512683 KIAA1683Q9H0B3 1180 aa15.3■□□□□ 0.04
VEGFA-216ENST00000512683 CCDC8Q9H0W5 538 aaPredicted RBP15.3■□□□□ 0.04
VEGFA-216ENST00000512683 CABP5Q9NP86 173 aa15.3■□□□□ 0.04
VEGFA-216ENST00000512683 EMILIN3Q9NT22 766 aa15.3■□□□□ 0.04
VEGFA-216ENST00000512683 JAG1P78504 1218 aa15.29■□□□□ 0.04
VEGFA-216ENST00000512683 CERKLQ49MI3 558 aaPredicted RBP15.29■□□□□ 0.04
VEGFA-216ENST00000512683 LBX2Q6XYB7 198 aa15.29■□□□□ 0.04
VEGFA-216ENST00000512683 PLEKHH3Q7Z736 793 aa15.29■□□□□ 0.04
VEGFA-216ENST00000512683 PANK1Q8TE04 598 aa15.29■□□□□ 0.04
VEGFA-216ENST00000512683 TXNRD2Q9NNW7 524 aa15.29■□□□□ 0.04
VEGFA-216ENST00000512683 GH2P01242 217 aa15.28■□□□□ 0.04
VEGFA-216ENST00000512683 CYP2B6P20813 491 aa15.28■□□□□ 0.04
VEGFA-216ENST00000512683 DYNLL1P63167 89 aaKnown RBP15.28■□□□□ 0.04
VEGFA-216ENST00000512683 Q3C1V9 767 aa15.28■□□□□ 0.04
VEGFA-216ENST00000512683 MORN1Q5T089 497 aa15.28■□□□□ 0.04
VEGFA-216ENST00000512683 CATSPERGQ6ZRH7 1159 aa15.28■□□□□ 0.04
VEGFA-216ENST00000512683 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.28■□□□□ 0.04
VEGFA-216ENST00000512683 TRIB2Q92519 343 aa15.28■□□□□ 0.04
VEGFA-216ENST00000512683 GDF15Q99988 308 aa15.28■□□□□ 0.04
VEGFA-216ENST00000512683 C11orf49Q9H6J7 331 aa15.28■□□□□ 0.04
VEGFA-216ENST00000512683 CDK5RAP2Q96SN8 1893 aa15.28■□□□□ 0.04
VEGFA-216ENST00000512683 GDF11O95390 407 aa15.27■□□□□ 0.04
VEGFA-216ENST00000512683 ZKSCAN1P17029 563 aaPredicted RBP15.27■□□□□ 0.04
VEGFA-216ENST00000512683 CEP85Q6P2H3 762 aa15.27■□□□□ 0.04
VEGFA-216ENST00000512683 GPR142Q7Z601 462 aa15.27■□□□□ 0.04
VEGFA-216ENST00000512683 MAGEB6Q8N7X4 407 aa15.27■□□□□ 0.04
VEGFA-216ENST00000512683 EDC3Q96F86 508 aaKnown RBP15.27■□□□□ 0.04
VEGFA-216ENST00000512683 CHMP4BQ9H444 224 aaKnown RBP15.27■□□□□ 0.04
VEGFA-216ENST00000512683 HOXC10Q9NYD6 342 aa15.27■□□□□ 0.04
VEGFA-216ENST00000512683 SAP30BPQ9UHR5 308 aaKnown RBP15.27■□□□□ 0.04
VEGFA-216ENST00000512683 SLC15A5A6NIM6 579 aa15.26■□□□□ 0.03
VEGFA-216ENST00000512683 HOXC6P09630 235 aa15.26■□□□□ 0.03
VEGFA-216ENST00000512683 PRKAR2AP13861 404 aaKnown RBP15.26■□□□□ 0.03
VEGFA-216ENST00000512683 MNX1P50219 401 aaPredicted RBP15.26■□□□□ 0.03
VEGFA-216ENST00000512683 MAP2K5Q13163 448 aa15.26■□□□□ 0.03
VEGFA-216ENST00000512683 ABCB5Q2M3G0 1257 aa15.26■□□□□ 0.03
VEGFA-216ENST00000512683 RPAP2Q8IXW5 612 aaPredicted RBP15.26■□□□□ 0.03
VEGFA-216ENST00000512683 FEZ1Q99689 392 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms