RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 NMRK2Q9NPI5 230 aa11.85□□□□□ -0.51
CLCN3-205ENST00000506924 BSDC1Q9NW68 430 aaPredicted RBP11.85□□□□□ -0.51
CLCN3-205ENST00000506924 KIAA1024Q9UPX6 916 aa11.85□□□□□ -0.51
CLCN3-205ENST00000506924 ZNF541Q9H0D2 1346 aa11.85□□□□□ -0.51
CLCN3-205ENST00000506924 A0A1W2PRU2 124 aa11.84□□□□□ -0.51
CLCN3-205ENST00000506924 TMEM229AB2RXF0 380 aa11.84□□□□□ -0.51
CLCN3-205ENST00000506924 SNAP23O00161 211 aa11.84□□□□□ -0.51
CLCN3-205ENST00000506924 TAF5LO75529 589 aa11.84□□□□□ -0.51
CLCN3-205ENST00000506924 SEC13P55735 322 aa11.84□□□□□ -0.51
CLCN3-205ENST00000506924 PDE4CQ08493 712 aa11.84□□□□□ -0.51
CLCN3-205ENST00000506924 NIM1KQ8IY84 436 aa11.84□□□□□ -0.51
CLCN3-205ENST00000506924 PUS3Q9BZE2 481 aaKnown RBP11.84□□□□□ -0.51
CLCN3-205ENST00000506924 RRAGCQ9HB90 399 aa11.84□□□□□ -0.51
CLCN3-205ENST00000506924 ETNK1Q9HBU6 452 aa11.84□□□□□ -0.51
CLCN3-205ENST00000506924 GGA1Q9UJY5 639 aa11.84□□□□□ -0.51
CLCN3-205ENST00000506924 NOVA2Q9UNW9 492 aaKnown RBP11.84□□□□□ -0.51
CLCN3-205ENST00000506924 GLTPD2A6NH11 291 aa11.83□□□□□ -0.52
CLCN3-205ENST00000506924 RELBQ01201 579 aa11.83□□□□□ -0.52
CLCN3-205ENST00000506924 CHRNDQ07001 517 aa11.83□□□□□ -0.52
CLCN3-205ENST00000506924 KIAA2012Q0VF49 1180 aa11.83□□□□□ -0.52
CLCN3-205ENST00000506924 RABL6Q3YEC7 729 aaPredicted RBP11.83□□□□□ -0.52
CLCN3-205ENST00000506924 LDHAL6AQ6ZMR3 332 aa11.83□□□□□ -0.52
CLCN3-205ENST00000506924 Q6ZNB5 142 aa11.83□□□□□ -0.52
CLCN3-205ENST00000506924 AGBL1Q96MI9 1066 aa11.83□□□□□ -0.52
CLCN3-205ENST00000506924 DBNDD1Q9H9R9 158 aa11.83□□□□□ -0.52
CLCN3-205ENST00000506924 ARHGEF10LQ9HCE6 1279 aa11.83□□□□□ -0.52
CLCN3-205ENST00000506924 CNNM1Q9NRU3 951 aa11.83□□□□□ -0.52
CLCN3-205ENST00000506924 HRH3Q9Y5N1 445 aa11.83□□□□□ -0.52
CLCN3-205ENST00000506924 GJA3Q9Y6H8 435 aa11.83□□□□□ -0.52
CLCN3-205ENST00000506924 XDHP47989 1333 aa11.83□□□□□ -0.52
CLCN3-205ENST00000506924 LTBP1Q14766 1721 aa11.83□□□□□ -0.52
CLCN3-205ENST00000506924 FZD9O00144 591 aa11.82□□□□□ -0.52
CLCN3-205ENST00000506924 GNAI3P08754 354 aa11.82□□□□□ -0.52
CLCN3-205ENST00000506924 KLRK1P26718 216 aa11.82□□□□□ -0.52
CLCN3-205ENST00000506924 LRRC24Q50LG9 513 aa11.82□□□□□ -0.52
CLCN3-205ENST00000506924 C20orf194Q5TEA3 1177 aa11.82□□□□□ -0.52
CLCN3-205ENST00000506924 TRIM46Q7Z4K8 759 aa11.82□□□□□ -0.52
CLCN3-205ENST00000506924 FAM200AQ8TCP9 573 aa11.82□□□□□ -0.52
CLCN3-205ENST00000506924 EYA3Q99504 573 aa11.82□□□□□ -0.52
CLCN3-205ENST00000506924 ZC3H12CQ9C0D7 883 aaKnown RBP11.82□□□□□ -0.52
CLCN3-205ENST00000506924 ATP13A2Q9NQ11 1180 aa11.82□□□□□ -0.52
CLCN3-205ENST00000506924 PODXL2Q9NZ53 605 aa11.82□□□□□ -0.52
CLCN3-205ENST00000506924 USTQ9Y2C2 406 aa11.82□□□□□ -0.52
CLCN3-205ENST00000506924 KDM2BQ8NHM5 1336 aa11.82□□□□□ -0.52
CLCN3-205ENST00000506924 RAD17O75943 681 aa11.81□□□□□ -0.52
CLCN3-205ENST00000506924 IL2RAP01589 272 aa11.81□□□□□ -0.52
CLCN3-205ENST00000506924 BMP2P12643 396 aa11.81□□□□□ -0.52
CLCN3-205ENST00000506924 ATP2B4P23634 1241 aa11.81□□□□□ -0.52
CLCN3-205ENST00000506924 KCNJ4P48050 445 aa11.81□□□□□ -0.52
CLCN3-205ENST00000506924 RNF144AP50876 292 aaPredicted RBP11.81□□□□□ -0.52
CLCN3-205ENST00000506924 EIF6P56537 245 aaKnown RBP11.81□□□□□ -0.52
CLCN3-205ENST00000506924 DPYDQ12882 1025 aa11.81□□□□□ -0.52
CLCN3-205ENST00000506924 SWI5Q1ZZU3 235 aa11.81□□□□□ -0.52
CLCN3-205ENST00000506924 SIL1Q9H173 461 aa11.81□□□□□ -0.52
CLCN3-205ENST00000506924 KCNQ5Q9NR82 932 aa11.81□□□□□ -0.52
CLCN3-205ENST00000506924 ZNRF3Q9ULT6 936 aa11.81□□□□□ -0.52
CLCN3-205ENST00000506924 YDJCA8MPS7 323 aa11.8□□□□□ -0.52
CLCN3-205ENST00000506924 ST8SIA5O15466 376 aa11.8□□□□□ -0.52
CLCN3-205ENST00000506924 ECE2O60344 883 aa11.8□□□□□ -0.52
CLCN3-205ENST00000506924 GNAI2P04899 355 aa11.8□□□□□ -0.52
CLCN3-205ENST00000506924 RFX5P48382 616 aaPredicted RBP11.8□□□□□ -0.52
CLCN3-205ENST00000506924 TXNRD3Q86VQ6 643 aa11.8□□□□□ -0.52
CLCN3-205ENST00000506924 ANKRD2Q9GZV1 360 aa11.8□□□□□ -0.52
CLCN3-205ENST00000506924 SENP2Q9HC62 589 aa11.8□□□□□ -0.52
CLCN3-205ENST00000506924 ZNF358Q9NW07 568 aa11.8□□□□□ -0.52
CLCN3-205ENST00000506924 ZMIZ1Q9ULJ6 1067 aa11.8□□□□□ -0.52
CLCN3-205ENST00000506924 PA2G4Q9UQ80 394 aaKnown RBP11.8□□□□□ -0.52
CLCN3-205ENST00000506924 ZNF804BA4D1E1 1349 aa11.8□□□□□ -0.52
CLCN3-205ENST00000506924 POTECB2RU33 542 aa11.79□□□□□ -0.52
CLCN3-205ENST00000506924 SRGAP3O43295 1099 aa11.79□□□□□ -0.52
CLCN3-205ENST00000506924 CXCL9Q07325 125 aa11.79□□□□□ -0.52
CLCN3-205ENST00000506924 MTFR1Q15390 333 aa11.79□□□□□ -0.52
CLCN3-205ENST00000506924 KIFC2Q96AC6 838 aa11.79□□□□□ -0.52
CLCN3-205ENST00000506924 VPS33BQ9H267 617 aa11.79□□□□□ -0.52
CLCN3-205ENST00000506924 LEMD3Q9Y2U8 911 aa11.79□□□□□ -0.52
CLCN3-205ENST00000506924 A0A1B0GUL6 1792 aa11.78□□□□□ -0.52
CLCN3-205ENST00000506924 PNMA6EA0A0J9YXQ4 647 aa11.78□□□□□ -0.52
CLCN3-205ENST00000506924 BMP1P13497 986 aa11.78□□□□□ -0.52
CLCN3-205ENST00000506924 PTPN12Q05209 780 aaKnown RBP11.78□□□□□ -0.52
CLCN3-205ENST00000506924 METTL24Q5JXM2 366 aa11.78□□□□□ -0.52
CLCN3-205ENST00000506924 ZNF395Q9H8N7 513 aaPredicted RBP11.78□□□□□ -0.52
CLCN3-205ENST00000506924 HDAC5Q9UQL6 1122 aa11.78□□□□□ -0.52
CLCN3-205ENST00000506924 RIPOR2Q9Y4F9 1068 aa11.78□□□□□ -0.52
CLCN3-205ENST00000506924 MEN1O00255 615 aa11.77□□□□□ -0.53
CLCN3-205ENST00000506924 PSMD14O00487 310 aa11.77□□□□□ -0.53
CLCN3-205ENST00000506924 VEGFAP15692 232 aaPredicted RBP11.77□□□□□ -0.53
CLCN3-205ENST00000506924 SMTNP53814 917 aa11.77□□□□□ -0.53
CLCN3-205ENST00000506924 MVPQ14764 893 aaKnown RBP11.77□□□□□ -0.53
CLCN3-205ENST00000506924 CIAPIN1Q6FI81 312 aa11.77□□□□□ -0.53
CLCN3-205ENST00000506924 C16orf71Q8IYS4 520 aaPredicted RBP11.77□□□□□ -0.53
CLCN3-205ENST00000506924 GPC2Q8N158 579 aa11.77□□□□□ -0.53
CLCN3-205ENST00000506924 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.77□□□□□ -0.53
CLCN3-205ENST00000506924 ZFP42Q96MM3 310 aa11.77□□□□□ -0.53
CLCN3-205ENST00000506924 PURBQ96QR8 312 aaKnown RBP11.77□□□□□ -0.53
CLCN3-205ENST00000506924 RAB6BQ9NRW1 208 aa11.77□□□□□ -0.53
CLCN3-205ENST00000506924 SHTN1A0MZ66 631 aa11.76□□□□□ -0.53
CLCN3-205ENST00000506924 EYA2O00167 538 aa11.76□□□□□ -0.53
CLCN3-205ENST00000506924 EPS15P42566 896 aa11.76□□□□□ -0.53
CLCN3-205ENST00000506924 GMPSP49915 693 aaPredicted RBP11.76□□□□□ -0.53
CLCN3-205ENST00000506924 ATG9AQ7Z3C6 839 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms