RNA–Protein interactions for RNA: ENST00000506023.1

BRIX1-202, Transcript of BRX1, biogenesis of ribosomes, humanhuman

TSL 3

Gene BRIX1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-202ENST00000506023 MAGEA10P43363 369 aaPredicted RBP12.77□□□□□ -0.37
BRIX1-202ENST00000506023 SPTY2D1Q68D10 685 aaPredicted RBP12.77□□□□□ -0.37
BRIX1-202ENST00000506023 TEX11Q8IYF3 940 aa12.77□□□□□ -0.37
BRIX1-202ENST00000506023 USP6NLQ92738 828 aa12.77□□□□□ -0.37
BRIX1-202ENST00000506023 AATFQ9NY61 560 aaKnown RBP eCLIP12.77□□□□□ -0.37
BRIX1-202ENST00000506023 RAI14Q9P0K7 980 aa12.77□□□□□ -0.37
BRIX1-202ENST00000506023 RBPJLQ9UBG7 517 aa12.77□□□□□ -0.37
BRIX1-202ENST00000506023 PNMA3Q9UL41 463 aa12.77□□□□□ -0.37
BRIX1-202ENST00000506023 OGDHLQ9ULD0 1010 aa12.77□□□□□ -0.37
BRIX1-202ENST00000506023 RPTORQ8N122 1335 aa12.77□□□□□ -0.37
BRIX1-202ENST00000506023 SPTBN5Q9NRC6 3674 aaKnown RBP12.76□□□□□ -0.37
BRIX1-202ENST00000506023 CNMDO75829 334 aa12.76□□□□□ -0.37
BRIX1-202ENST00000506023 COL6A1P12109 1028 aa12.76□□□□□ -0.37
BRIX1-202ENST00000506023 PRKAR2AP13861 404 aaKnown RBP12.76□□□□□ -0.37
BRIX1-202ENST00000506023 TRIM27P14373 513 aa12.76□□□□□ -0.37
BRIX1-202ENST00000506023 CCND3P30281 292 aaPredicted RBP12.76□□□□□ -0.37
BRIX1-202ENST00000506023 BMP8BP34820 402 aa12.76□□□□□ -0.37
BRIX1-202ENST00000506023 GCLCP48506 637 aaPredicted RBP12.76□□□□□ -0.37
BRIX1-202ENST00000506023 METTL16Q86W50 562 aaKnown RBP12.76□□□□□ -0.37
BRIX1-202ENST00000506023 MAPKAPK5Q8IW41 473 aa12.76□□□□□ -0.37
BRIX1-202ENST00000506023 SLF2Q8IX21 1173 aa12.76□□□□□ -0.37
BRIX1-202ENST00000506023 SLC17A8Q8NDX2 589 aa12.76□□□□□ -0.37
BRIX1-202ENST00000506023 DBNDD2Q9BQY9 259 aa12.76□□□□□ -0.37
BRIX1-202ENST00000506023 WDR18Q9BV38 432 aa12.76□□□□□ -0.37
BRIX1-202ENST00000506023 FLT1P17948 1338 aa12.76□□□□□ -0.37
BRIX1-202ENST00000506023 ZNFX1Q9P2E3 1918 aaKnown RBP12.76□□□□□ -0.37
BRIX1-202ENST00000506023 CYP2E1P05181 493 aaPredicted RBP12.75□□□□□ -0.37
BRIX1-202ENST00000506023 COL11A1P12107 1806 aaPredicted RBP12.75□□□□□ -0.37
BRIX1-202ENST00000506023 MYH8P13535 1937 aa12.75□□□□□ -0.37
BRIX1-202ENST00000506023 HOXA7P31268 230 aaPredicted RBP12.75□□□□□ -0.37
BRIX1-202ENST00000506023 BACE1P56817 501 aa12.75□□□□□ -0.37
BRIX1-202ENST00000506023 HERVK_113P62684 666 aa12.75□□□□□ -0.37
BRIX1-202ENST00000506023 DYNLL1P63167 89 aaKnown RBP12.75□□□□□ -0.37
BRIX1-202ENST00000506023 EVX2Q03828 476 aa12.75□□□□□ -0.37
BRIX1-202ENST00000506023 CACNB2Q08289 660 aaPredicted RBP12.75□□□□□ -0.37
BRIX1-202ENST00000506023 LHX8Q68G74 356 aa12.75□□□□□ -0.37
BRIX1-202ENST00000506023 ANKLE1Q8NAG6 615 aa12.75□□□□□ -0.37
BRIX1-202ENST00000506023 TGFBRAP1Q8WUH2 860 aa12.75□□□□□ -0.37
BRIX1-202ENST00000506023 PRUNE2Q8WUY3 3088 aa12.75□□□□□ -0.37
BRIX1-202ENST00000506023 C11orf49Q9H6J7 331 aa12.75□□□□□ -0.37
BRIX1-202ENST00000506023 HMX1Q9NP08 348 aaPredicted RBP12.75□□□□□ -0.37
BRIX1-202ENST00000506023 PIH1D3Q9NQM4 214 aaKnown RBP12.75□□□□□ -0.37
BRIX1-202ENST00000506023 EMILIN3Q9NT22 766 aa12.75□□□□□ -0.37
BRIX1-202ENST00000506023 TLR7Q9NYK1 1049 aaKnown RBP12.75□□□□□ -0.37
BRIX1-202ENST00000506023 FLRT1Q9NZU1 646 aa12.75□□□□□ -0.37
BRIX1-202ENST00000506023 PALD1Q9ULE6 856 aa12.75□□□□□ -0.37
BRIX1-202ENST00000506023 AKAP2Q9Y2D5 859 aa12.75□□□□□ -0.37
BRIX1-202ENST00000506023 BCAR3O75815 825 aa12.74□□□□□ -0.37
BRIX1-202ENST00000506023 LRRC26Q2I0M4 334 aa12.74□□□□□ -0.37
BRIX1-202ENST00000506023 MORN1Q5T089 497 aa12.74□□□□□ -0.37
BRIX1-202ENST00000506023 NBPF3Q9H094 633 aa12.74□□□□□ -0.37
BRIX1-202ENST00000506023 SAP30BPQ9UHR5 308 aaKnown RBP12.74□□□□□ -0.37
BRIX1-202ENST00000506023 HERC5Q9UII4 1024 aaKnown RBP12.74□□□□□ -0.37
BRIX1-202ENST00000506023 ZBTB21Q9ULJ3 1066 aa12.74□□□□□ -0.37
BRIX1-202ENST00000506023 NDUFB9Q9Y6M9 179 aa12.74□□□□□ -0.37
BRIX1-202ENST00000506023 LDHCP07864 332 aa12.73□□□□□ -0.37
BRIX1-202ENST00000506023 CT47B1P0C2W7 299 aaPredicted RBP12.73□□□□□ -0.37
BRIX1-202ENST00000506023 PPP4CP60510 307 aa12.73□□□□□ -0.37
BRIX1-202ENST00000506023 ARHGAP45Q92619 1136 aa12.73□□□□□ -0.37
BRIX1-202ENST00000506023 PI4KBQ9UBF8 816 aa12.73□□□□□ -0.37
BRIX1-202ENST00000506023 ZNF236Q9UL36 1845 aa12.73□□□□□ -0.37
BRIX1-202ENST00000506023 SMCHD1A6NHR9 2005 aa12.72□□□□□ -0.37
BRIX1-202ENST00000506023 BAZ2AQ9UIF9 1905 aaKnown RBP12.72□□□□□ -0.37
BRIX1-202ENST00000506023 MAP4K4O95819 1239 aaPredicted RBP12.72□□□□□ -0.37
BRIX1-202ENST00000506023 GNAI3P08754 354 aa12.72□□□□□ -0.37
BRIX1-202ENST00000506023 ZAP70P43403 619 aa12.72□□□□□ -0.37
BRIX1-202ENST00000506023 ERVK-9P63128 1117 aa12.72□□□□□ -0.37
BRIX1-202ENST00000506023 ERVK-24P63145 666 aa12.72□□□□□ -0.37
BRIX1-202ENST00000506023 GSTO1P78417 241 aa12.72□□□□□ -0.37
BRIX1-202ENST00000506023 LRIT3Q3SXY7 679 aa12.72□□□□□ -0.37
BRIX1-202ENST00000506023 TNNI3KQ59H18 835 aa12.72□□□□□ -0.37
BRIX1-202ENST00000506023 NAA16Q6N069 864 aaPredicted RBP12.72□□□□□ -0.37
BRIX1-202ENST00000506023 GPR142Q7Z601 462 aa12.72□□□□□ -0.37
BRIX1-202ENST00000506023 DEFB123Q8N688 67 aa12.72□□□□□ -0.37
BRIX1-202ENST00000506023 CLUAP1Q96AJ1 413 aa12.72□□□□□ -0.37
BRIX1-202ENST00000506023 TBC1D2Q9BYX2 928 aa12.72□□□□□ -0.37
BRIX1-202ENST00000506023 C1orf115Q9H7X2 142 aa12.72□□□□□ -0.37
BRIX1-202ENST00000506023 MTMR10Q9NXD2 777 aa12.72□□□□□ -0.37
BRIX1-202ENST00000506023 LRP2BPQ9P2M1 347 aa12.72□□□□□ -0.37
BRIX1-202ENST00000506023 FPGT-TNNI3KV9GXZ4 949 aa12.72□□□□□ -0.37
BRIX1-202ENST00000506023 IGHA2P01877 340 aa12.71□□□□□ -0.37
BRIX1-202ENST00000506023 ASNSP08243 561 aa12.71□□□□□ -0.37
BRIX1-202ENST00000506023 XRCC5P13010 732 aaKnown RBP12.71□□□□□ -0.37
BRIX1-202ENST00000506023 IRX3P78415 501 aaPredicted RBP12.71□□□□□ -0.37
BRIX1-202ENST00000506023 PABPC4Q13310 644 aaKnown RBP eCLIP12.71□□□□□ -0.37
BRIX1-202ENST00000506023 TDHQ8IZJ6 230 aa12.71□□□□□ -0.37
BRIX1-202ENST00000506023 TMEM57Q8N5G2 664 aa12.71□□□□□ -0.37
BRIX1-202ENST00000506023 GPRC5AQ8NFJ5 357 aa12.71□□□□□ -0.37
BRIX1-202ENST00000506023 PAGR1Q9BTK6 254 aa12.71□□□□□ -0.37
BRIX1-202ENST00000506023 AS3MTQ9HBK9 375 aa12.71□□□□□ -0.37
BRIX1-202ENST00000506023 DBNLQ9UJU6 430 aaKnown RBP12.71□□□□□ -0.37
BRIX1-202ENST00000506023 PLXNA1Q9UIW2 1896 aa12.71□□□□□ -0.37
BRIX1-202ENST00000506023 USP17L10C9JJH3 530 aa12.7□□□□□ -0.38
BRIX1-202ENST00000506023 GH2P01242 217 aa12.7□□□□□ -0.38
BRIX1-202ENST00000506023 GNAI2P04899 355 aa12.7□□□□□ -0.38
BRIX1-202ENST00000506023 CAPN2P17655 700 aa12.7□□□□□ -0.38
BRIX1-202ENST00000506023 GUCY1A2P33402 732 aa12.7□□□□□ -0.38
BRIX1-202ENST00000506023 MDM2Q00987 491 aaPredicted RBP12.7□□□□□ -0.38
BRIX1-202ENST00000506023 ZYXQ15942 572 aaKnown RBP12.7□□□□□ -0.38
BRIX1-202ENST00000506023 GORABQ5T7V8 394 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms