RNA–Protein interactions for RNA: ENST00000504959.5

SNX25-203, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 1,868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-203ENST00000504959 MAP3K11Q16584 847 aa6.93□□□□□ -1.3
SNX25-203ENST00000504959 PEAR1Q5VY43 1037 aaPredicted RBP6.93□□□□□ -1.3
SNX25-203ENST00000504959 RPAP2Q8IXW5 612 aaPredicted RBP6.93□□□□□ -1.3
SNX25-203ENST00000504959 ZNF296Q8WUU4 475 aaPredicted RBP6.93□□□□□ -1.3
SNX25-203ENST00000504959 TMEM74Q96NL1 305 aa6.93□□□□□ -1.3
SNX25-203ENST00000504959 ANKIB1Q9P2G1 1089 aa6.93□□□□□ -1.3
SNX25-203ENST00000504959 KANSL3Q9P2N6 904 aa6.93□□□□□ -1.3
SNX25-203ENST00000504959 NWD1Q149M9 1564 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 NFAT5O94916 1531 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 A0A1W2PP55 124 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 TTC24A2A3L6 582 aaPredicted RBP6.92□□□□□ -1.3
SNX25-203ENST00000504959 FAM221BA6H8Z2 402 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 CYP2E1P05181 493 aaPredicted RBP6.92□□□□□ -1.3
SNX25-203ENST00000504959 FCGRTP55899 365 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 IGBP1P78318 339 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 TYRO3Q06418 890 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 BMP2KLQ5H9B9 411 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 RELL1Q8IUW5 271 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 SIRT2Q8IXJ6 389 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 MEIOBQ8N635 442 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 ANKRD44Q8N8A2 993 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 SNIP1Q8TAD8 396 aaKnown RBP6.92□□□□□ -1.3
SNX25-203ENST00000504959 MKL1Q969V6 931 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 ZIC5Q96T25 663 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 EHD4Q9H223 541 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 BABAM1Q9NWV8 329 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 SNTG2Q9NY99 539 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 TLR6Q9Y2C9 796 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 GPC6Q9Y625 555 aaPredicted RBP6.92□□□□□ -1.3
SNX25-203ENST00000504959 KIF1AQ12756 1690 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 RGS12O14924 1447 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 SOS1Q07889 1333 aaPredicted RBP6.92□□□□□ -1.3
SNX25-203ENST00000504959 J3QL48 77 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 ENPP3O14638 875 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 EIF5BO60841 1220 aaKnown RBP6.92□□□□□ -1.3
SNX25-203ENST00000504959 HMMRO75330 724 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 CES1P23141 567 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 CTSOP43234 321 aaPredicted RBP6.92□□□□□ -1.3
SNX25-203ENST00000504959 SOX9P48436 509 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 FAM160A1Q05DH4 1040 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 RAB33AQ14088 237 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 RASA3Q14644 834 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 ARSJQ5FYB0 599 aaPredicted RBP6.92□□□□□ -1.3
SNX25-203ENST00000504959 RHOVQ96L33 236 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 ORAI2Q96SN7 254 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 TRIM55Q9BYV6 548 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 DCTPP1Q9H773 170 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 UBP1Q9NZI7 540 aa6.92□□□□□ -1.3
SNX25-203ENST00000504959 PHRF1Q9P1Y6 1649 aaKnown RBP6.91□□□□□ -1.3
SNX25-203ENST00000504959 RGPD5Q99666 1765 aa6.91□□□□□ -1.3
SNX25-203ENST00000504959 CCDC85CA6NKD9 419 aa6.91□□□□□ -1.3
SNX25-203ENST00000504959 SPATA31C2B4DYI2 1134 aa6.91□□□□□ -1.3
SNX25-203ENST00000504959 FRAT2O75474 233 aaPredicted RBP6.91□□□□□ -1.3
SNX25-203ENST00000504959 SMPD1P17405 629 aa6.91□□□□□ -1.3
SNX25-203ENST00000504959 POU4F2Q12837 409 aa6.91□□□□□ -1.3
SNX25-203ENST00000504959 PWP1Q13610 501 aa6.91□□□□□ -1.3
SNX25-203ENST00000504959 KIAA0319Q5VV43 1072 aa6.91□□□□□ -1.3
SNX25-203ENST00000504959 G2E3Q7L622 706 aa6.91□□□□□ -1.3
SNX25-203ENST00000504959 IL17REQ8NFR9 667 aa6.91□□□□□ -1.3
SNX25-203ENST00000504959 MEIS3Q99687 375 aa6.91□□□□□ -1.3
SNX25-203ENST00000504959 SLKQ9H2G2 1235 aaPredicted RBP6.91□□□□□ -1.3
SNX25-203ENST00000504959 KANSL2Q9H9L4 492 aa6.91□□□□□ -1.3
SNX25-203ENST00000504959 ABCB6Q9NP58 842 aa6.91□□□□□ -1.3
SNX25-203ENST00000504959 SIRPGQ9P1W8 387 aa6.91□□□□□ -1.3
SNX25-203ENST00000504959 LMO7Q8WWI1 1683 aa6.9□□□□□ -1.3
SNX25-203ENST00000504959 GCP02774 474 aa6.9□□□□□ -1.3
SNX25-203ENST00000504959 TEFQ10587 303 aa6.9□□□□□ -1.3
SNX25-203ENST00000504959 PLEKHO1Q53GL0 409 aaPredicted RBP6.9□□□□□ -1.3
SNX25-203ENST00000504959 CEP85Q6P2H3 762 aa6.9□□□□□ -1.3
SNX25-203ENST00000504959 KRT28Q7Z3Y7 464 aa6.9□□□□□ -1.3
SNX25-203ENST00000504959 HSCBQ8IWL3 235 aa6.9□□□□□ -1.3
SNX25-203ENST00000504959 ANAPC16Q96DE5 110 aa6.9□□□□□ -1.3
SNX25-203ENST00000504959 OXCT2Q9BYC2 517 aaPredicted RBP6.9□□□□□ -1.3
SNX25-203ENST00000504959 POLMQ9NP87 494 aaPredicted RBP6.9□□□□□ -1.3
SNX25-203ENST00000504959 KLHL42Q9P2K6 505 aa6.9□□□□□ -1.3
SNX25-203ENST00000504959 AKAP2Q9Y2D5 859 aa6.9□□□□□ -1.3
SNX25-203ENST00000504959 N4BP2Q86UW6 1770 aaPredicted RBP6.9□□□□□ -1.3
SNX25-203ENST00000504959 KDM3BQ7LBC6 1761 aa6.9□□□□□ -1.31
SNX25-203ENST00000504959 TRPM3Q9HCF6 1732 aaPredicted RBP6.9□□□□□ -1.31
SNX25-203ENST00000504959 GNAI2P04899 355 aa6.9□□□□□ -1.31
SNX25-203ENST00000504959 GNAI3P08754 354 aa6.9□□□□□ -1.31
SNX25-203ENST00000504959 ATF3P18847 181 aa6.9□□□□□ -1.31
SNX25-203ENST00000504959 GARTP22102 1010 aa6.9□□□□□ -1.31
SNX25-203ENST00000504959 CRKP46108 304 aa6.9□□□□□ -1.31
SNX25-203ENST00000504959 AMOTQ4VCS5 1084 aa6.9□□□□□ -1.31
SNX25-203ENST00000504959 C1orf141Q5JVX7 400 aa6.9□□□□□ -1.31
SNX25-203ENST00000504959 ZNF530Q6P9A1 599 aaPredicted RBP6.9□□□□□ -1.31
SNX25-203ENST00000504959 PRICKLE2Q7Z3G6 844 aa6.9□□□□□ -1.31
SNX25-203ENST00000504959 FILIP1Q7Z7B0 1213 aa6.9□□□□□ -1.31
SNX25-203ENST00000504959 PHC3Q8NDX5 983 aa6.9□□□□□ -1.31
SNX25-203ENST00000504959 DEPDC7Q96QD5 511 aa6.9□□□□□ -1.31
SNX25-203ENST00000504959 KCNQ5Q9NR82 932 aa6.9□□□□□ -1.31
SNX25-203ENST00000504959 GMPR2Q9P2T1 348 aaKnown RBP6.9□□□□□ -1.31
SNX25-203ENST00000504959 CDC45O75419 566 aa6.89□□□□□ -1.31
SNX25-203ENST00000504959 CLSTN1O94985 981 aa6.89□□□□□ -1.31
SNX25-203ENST00000504959 EGFRP00533 1210 aa6.89□□□□□ -1.31
SNX25-203ENST00000504959 CELA3AP09093 270 aa6.89□□□□□ -1.31
SNX25-203ENST00000504959 AKAP4Q5JQC9 854 aa6.89□□□□□ -1.31
SNX25-203ENST00000504959 RNF187Q5TA31 235 aaPredicted RBP6.89□□□□□ -1.31
SNX25-203ENST00000504959 CASC1Q6TDU7 716 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms