RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 HERVK_113P62684 666 aa8.51□□□□□ -1.05
NPIPB3-203ENST00000504841 CACNB2Q08289 660 aaPredicted RBP8.51□□□□□ -1.05
NPIPB3-203ENST00000504841 SHROOM1Q2M3G4 852 aaPredicted RBP8.51□□□□□ -1.05
NPIPB3-203ENST00000504841 SH3D19Q5HYK7 790 aa8.51□□□□□ -1.05
NPIPB3-203ENST00000504841 GORABQ5T7V8 394 aa8.51□□□□□ -1.05
NPIPB3-203ENST00000504841 MAP3K21Q5TCX8 1036 aa8.51□□□□□ -1.05
NPIPB3-203ENST00000504841 WDR78Q5VTH9 848 aa8.51□□□□□ -1.05
NPIPB3-203ENST00000504841 CRACR2BQ8N4Y2 399 aaPredicted RBP8.51□□□□□ -1.05
NPIPB3-203ENST00000504841 SPATA5Q8NB90 893 aa8.51□□□□□ -1.05
NPIPB3-203ENST00000504841 SH3RF3Q8TEJ3 882 aaPredicted RBP8.51□□□□□ -1.05
NPIPB3-203ENST00000504841 P2RX7Q99572 595 aaKnown RBP8.51□□□□□ -1.05
NPIPB3-203ENST00000504841 MEIS3Q99687 375 aa8.51□□□□□ -1.05
NPIPB3-203ENST00000504841 APBA2Q99767 749 aa8.51□□□□□ -1.05
NPIPB3-203ENST00000504841 LBHD1Q9BQE6 289 aaPredicted RBP8.51□□□□□ -1.05
NPIPB3-203ENST00000504841 NOL10Q9BSC4 688 aaKnown RBP8.51□□□□□ -1.05
NPIPB3-203ENST00000504841 PORCNQ9H237 461 aa8.51□□□□□ -1.05
NPIPB3-203ENST00000504841 HMG20BQ9P0W2 317 aa8.51□□□□□ -1.05
NPIPB3-203ENST00000504841 NDUFB9Q9Y6M9 179 aa8.51□□□□□ -1.05
NPIPB3-203ENST00000504841 PDS5AQ29RF7 1337 aaKnown RBP8.51□□□□□ -1.05
NPIPB3-203ENST00000504841 ZNF521Q96K83 1311 aa8.51□□□□□ -1.05
NPIPB3-203ENST00000504841 COL2A1P02458 1487 aaPredicted RBP8.51□□□□□ -1.05
NPIPB3-203ENST00000504841 E9PSI1 815 aa8.5□□□□□ -1.05
NPIPB3-203ENST00000504841 SRGAP3O43295 1099 aa8.5□□□□□ -1.05
NPIPB3-203ENST00000504841 ASNSP08243 561 aa8.5□□□□□ -1.05
NPIPB3-203ENST00000504841 COL6A1P12109 1028 aa8.5□□□□□ -1.05
NPIPB3-203ENST00000504841 MAPK4P31152 587 aa8.5□□□□□ -1.05
NPIPB3-203ENST00000504841 RANBP2P49792 3224 aaKnown RBP8.5□□□□□ -1.05
NPIPB3-203ENST00000504841 ATN1P54259 1190 aaPredicted RBP8.5□□□□□ -1.05
NPIPB3-203ENST00000504841 BACE1P56817 501 aa8.5□□□□□ -1.05
NPIPB3-203ENST00000504841 ERVK-9P63128 1117 aa8.5□□□□□ -1.05
NPIPB3-203ENST00000504841 ERVK-24P63145 666 aa8.5□□□□□ -1.05
NPIPB3-203ENST00000504841 JAG1P78504 1218 aa8.5□□□□□ -1.05
NPIPB3-203ENST00000504841 ZYXQ15942 572 aaKnown RBP8.5□□□□□ -1.05
NPIPB3-203ENST00000504841 GPR142Q7Z601 462 aa8.5□□□□□ -1.05
NPIPB3-203ENST00000504841 MAPKAPK5Q8IW41 473 aa8.5□□□□□ -1.05
NPIPB3-203ENST00000504841 TRMT44Q8IYL2 757 aaKnown RBP8.5□□□□□ -1.05
NPIPB3-203ENST00000504841 NSUN4Q96CB9 384 aaKnown RBP8.5□□□□□ -1.05
NPIPB3-203ENST00000504841 GUCD1Q96NT3 240 aa8.5□□□□□ -1.05
NPIPB3-203ENST00000504841 FEZ1Q99689 392 aa8.5□□□□□ -1.05
NPIPB3-203ENST00000504841 SENP6Q9GZR1 1112 aaPredicted RBP8.5□□□□□ -1.05
NPIPB3-203ENST00000504841 COPRSQ9NQ92 184 aa8.5□□□□□ -1.05
NPIPB3-203ENST00000504841 AATFQ9NY61 560 aaKnown RBP eCLIP8.5□□□□□ -1.05
NPIPB3-203ENST00000504841 LRP2BPQ9P2M1 347 aa8.5□□□□□ -1.05
NPIPB3-203ENST00000504841 RBPJLQ9UBG7 517 aa8.5□□□□□ -1.05
NPIPB3-203ENST00000504841 SAP30BPQ9UHR5 308 aaKnown RBP8.5□□□□□ -1.05
NPIPB3-203ENST00000504841 HERC5Q9UII4 1024 aaKnown RBP8.5□□□□□ -1.05
NPIPB3-203ENST00000504841 AKAP2Q9Y2D5 859 aa8.5□□□□□ -1.05
NPIPB3-203ENST00000504841 FARP1Q9Y4F1 1045 aaPredicted RBP8.5□□□□□ -1.05
NPIPB3-203ENST00000504841 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.5□□□□□ -1.05
NPIPB3-203ENST00000504841 XRCC5P13010 732 aaKnown RBP8.49□□□□□ -1.05
NPIPB3-203ENST00000504841 CNGA1P29973 690 aa8.49□□□□□ -1.05
NPIPB3-203ENST00000504841 VASPP50552 380 aaPredicted RBP8.49□□□□□ -1.05
NPIPB3-203ENST00000504841 Q3C1V9 767 aa8.49□□□□□ -1.05
NPIPB3-203ENST00000504841 ZNF697Q5TEC3 545 aa8.49□□□□□ -1.05
NPIPB3-203ENST00000504841 PLEKHH3Q7Z736 793 aa8.49□□□□□ -1.05
NPIPB3-203ENST00000504841 WDR18Q9BV38 432 aa8.49□□□□□ -1.05
NPIPB3-203ENST00000504841 DNAJC18Q9H819 358 aa8.49□□□□□ -1.05
NPIPB3-203ENST00000504841 SNRKQ9NRH2 765 aa8.49□□□□□ -1.05
NPIPB3-203ENST00000504841 PI4KBQ9UBF8 816 aa8.49□□□□□ -1.05
NPIPB3-203ENST00000504841 PRKAG2Q9UGJ0 569 aa8.49□□□□□ -1.05
NPIPB3-203ENST00000504841 PALD1Q9ULE6 856 aa8.49□□□□□ -1.05
NPIPB3-203ENST00000504841 ZBTB21Q9ULJ3 1066 aa8.49□□□□□ -1.05
NPIPB3-203ENST00000504841 NOB1Q9ULX3 412 aaKnown RBP8.49□□□□□ -1.05
NPIPB3-203ENST00000504841 HDAC5Q9UQL6 1122 aa8.49□□□□□ -1.05
NPIPB3-203ENST00000504841 SIPA1L1O43166 1804 aa8.49□□□□□ -1.05
NPIPB3-203ENST00000504841 MAST2Q6P0Q8 1798 aa8.48□□□□□ -1.05
NPIPB3-203ENST00000504841 FRMPD3Q5JV73 1810 aa8.48□□□□□ -1.05
NPIPB3-203ENST00000504841 C19orf81C9J6K1 198 aa8.48□□□□□ -1.05
NPIPB3-203ENST00000504841 USP17L10C9JJH3 530 aa8.48□□□□□ -1.05
NPIPB3-203ENST00000504841 HOXA7P31268 230 aaPredicted RBP8.48□□□□□ -1.05
NPIPB3-203ENST00000504841 MCAMP43121 646 aa8.48□□□□□ -1.05
NPIPB3-203ENST00000504841 MAP2K5Q13163 448 aa8.48□□□□□ -1.05
NPIPB3-203ENST00000504841 ALDH1L2Q3SY69 923 aa8.48□□□□□ -1.05
NPIPB3-203ENST00000504841 MORN1Q5T089 497 aa8.48□□□□□ -1.05
NPIPB3-203ENST00000504841 MFSD14CQ5VZR4 134 aa8.48□□□□□ -1.05
NPIPB3-203ENST00000504841 LHX8Q68G74 356 aa8.48□□□□□ -1.05
NPIPB3-203ENST00000504841 NAA16Q6N069 864 aaPredicted RBP8.48□□□□□ -1.05
NPIPB3-203ENST00000504841 TGFBRAP1Q8WUH2 860 aa8.48□□□□□ -1.05
NPIPB3-203ENST00000504841 CDCA7LQ96GN5 454 aa8.48□□□□□ -1.05
NPIPB3-203ENST00000504841 API5Q9BZZ5 524 aaKnown RBP8.48□□□□□ -1.05
NPIPB3-203ENST00000504841 PRDM5Q9NQX1 630 aaPredicted RBP8.48□□□□□ -1.05
NPIPB3-203ENST00000504841 FLRT1Q9NZU1 646 aa8.48□□□□□ -1.05
NPIPB3-203ENST00000504841 FLT1P17948 1338 aa8.48□□□□□ -1.05
NPIPB3-203ENST00000504841 BAG3O95817 575 aa8.47□□□□□ -1.05
NPIPB3-203ENST00000504841 MAP4K4O95819 1239 aaPredicted RBP8.47□□□□□ -1.05
NPIPB3-203ENST00000504841 GH2P01242 217 aa8.47□□□□□ -1.05
NPIPB3-203ENST00000504841 HLA-DOAP06340 250 aa8.47□□□□□ -1.05
NPIPB3-203ENST00000504841 ARID4AP29374 1257 aaPredicted RBP8.47□□□□□ -1.05
NPIPB3-203ENST00000504841 RTP1P59025 263 aa8.47□□□□□ -1.05
NPIPB3-203ENST00000504841 SLFN5Q08AF3 891 aa8.47□□□□□ -1.05
NPIPB3-203ENST00000504841 ANO1Q5XXA6 986 aa8.47□□□□□ -1.05
NPIPB3-203ENST00000504841 USP17L2Q6R6M4 530 aa8.47□□□□□ -1.05
NPIPB3-203ENST00000504841 MAFAQ8NHW3 353 aaPredicted RBP8.47□□□□□ -1.05
NPIPB3-203ENST00000504841 GTF3C2Q8WUA4 911 aaPredicted RBP8.47□□□□□ -1.05
NPIPB3-203ENST00000504841 USP6NLQ92738 828 aa8.47□□□□□ -1.05
NPIPB3-203ENST00000504841 DHX36Q9H2U1 1008 aaKnown RBP8.47□□□□□ -1.05
NPIPB3-203ENST00000504841 EMILIN3Q9NT22 766 aa8.47□□□□□ -1.05
NPIPB3-203ENST00000504841 DDX20Q9UHI6 824 aaKnown RBP8.47□□□□□ -1.05
NPIPB3-203ENST00000504841 ATP11BQ9Y2G3 1177 aa8.47□□□□□ -1.05
NPIPB3-203ENST00000504841 POTEB2H3BUK9 544 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms