RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 TNP2Q05952 138 aa7.61□□□□□ -1.19
TMEM39A-212ENST00000497993 AAMPQ13685 434 aa7.61□□□□□ -1.19
TMEM39A-212ENST00000497993 R3HDM1Q15032 1099 aaKnown RBP7.61□□□□□ -1.19
TMEM39A-212ENST00000497993 CAPN12Q6ZSI9 719 aa7.61□□□□□ -1.19
TMEM39A-212ENST00000497993 EXOC8Q8IYI6 725 aa7.61□□□□□ -1.19
TMEM39A-212ENST00000497993 ZNF280CQ8ND82 737 aa7.61□□□□□ -1.19
TMEM39A-212ENST00000497993 DDX54Q8TDD1 881 aaKnown RBP7.61□□□□□ -1.19
TMEM39A-212ENST00000497993 SMARCC1Q92922 1105 aaPredicted RBP7.61□□□□□ -1.19
TMEM39A-212ENST00000497993 ALKBH8Q96BT7 664 aaKnown RBP7.61□□□□□ -1.19
TMEM39A-212ENST00000497993 ACSBG1Q96GR2 724 aa7.61□□□□□ -1.19
TMEM39A-212ENST00000497993 CRELD1Q96HD1 420 aa7.61□□□□□ -1.19
TMEM39A-212ENST00000497993 COL25A1Q9BXS0 654 aaPredicted RBP7.61□□□□□ -1.19
TMEM39A-212ENST00000497993 TMX1Q9H3N1 280 aa7.61□□□□□ -1.19
TMEM39A-212ENST00000497993 DDX41Q9UJV9 622 aaKnown RBP7.61□□□□□ -1.19
TMEM39A-212ENST00000497993 DLEC1Q9Y238 1755 aa7.61□□□□□ -1.19
TMEM39A-212ENST00000497993 CACNA1FO60840 1977 aa7.6□□□□□ -1.19
TMEM39A-212ENST00000497993 AFDNP55196 1824 aaKnown RBP7.6□□□□□ -1.19
TMEM39A-212ENST00000497993 ARFGEF1Q9Y6D6 1849 aa7.6□□□□□ -1.19
TMEM39A-212ENST00000497993 EFSO43281 561 aa7.6□□□□□ -1.19
TMEM39A-212ENST00000497993 WIPF1O43516 503 aa7.6□□□□□ -1.19
TMEM39A-212ENST00000497993 DIAPH1O60610 1272 aaKnown RBP7.6□□□□□ -1.19
TMEM39A-212ENST00000497993 MAPTP10636 758 aaKnown RBP7.6□□□□□ -1.19
TMEM39A-212ENST00000497993 ZEB1P37275 1124 aaPredicted RBP7.6□□□□□ -1.19
TMEM39A-212ENST00000497993 TNNT2P45379 298 aaPredicted RBP7.6□□□□□ -1.19
TMEM39A-212ENST00000497993 PLEKHO1Q53GL0 409 aaPredicted RBP7.6□□□□□ -1.19
TMEM39A-212ENST00000497993 MORC4Q8TE76 937 aa7.6□□□□□ -1.19
TMEM39A-212ENST00000497993 HSH2DQ96JZ2 352 aa7.6□□□□□ -1.19
TMEM39A-212ENST00000497993 MBIPQ9NS73 344 aa7.6□□□□□ -1.19
TMEM39A-212ENST00000497993 KLK14Q9P0G3 267 aa7.6□□□□□ -1.19
TMEM39A-212ENST00000497993 BCCIPQ9P287 314 aaKnown RBP eCLIP7.6□□□□□ -1.19
TMEM39A-212ENST00000497993 DMGDHQ9UI17 866 aaKnown RBP7.6□□□□□ -1.19
TMEM39A-212ENST00000497993 NSFL1CQ9UNZ2 370 aaKnown RBP7.6□□□□□ -1.19
TMEM39A-212ENST00000497993 BCS1LQ9Y276 419 aa7.6□□□□□ -1.19
TMEM39A-212ENST00000497993 MRPL42Q9Y6G3 142 aaKnown RBP7.6□□□□□ -1.19
TMEM39A-212ENST00000497993 KHNYNO15037 678 aaKnown RBP7.59□□□□□ -1.19
TMEM39A-212ENST00000497993 PARNO95453 639 aaKnown RBP7.59□□□□□ -1.19
TMEM39A-212ENST00000497993 FGFR3P22607 806 aa7.59□□□□□ -1.19
TMEM39A-212ENST00000497993 PPP2R1AP30153 589 aa7.59□□□□□ -1.19
TMEM39A-212ENST00000497993 GNA15P30679 374 aa7.59□□□□□ -1.19
TMEM39A-212ENST00000497993 GAS6Q14393 721 aa7.59□□□□□ -1.19
TMEM39A-212ENST00000497993 ZNF827Q17R98 1081 aa7.59□□□□□ -1.19
TMEM39A-212ENST00000497993 AKAP4Q5JQC9 854 aa7.59□□□□□ -1.19
TMEM39A-212ENST00000497993 CC2D1BQ5T0F9 858 aaKnown RBP7.59□□□□□ -1.19
TMEM39A-212ENST00000497993 SULT6B1Q6IMI4 303 aa7.59□□□□□ -1.19
TMEM39A-212ENST00000497993 BTLAQ7Z6A9 289 aa7.59□□□□□ -1.19
TMEM39A-212ENST00000497993 MCF2L2Q86YR7 1114 aa7.59□□□□□ -1.19
TMEM39A-212ENST00000497993 CKAP2LQ8IYA6 745 aa7.59□□□□□ -1.19
TMEM39A-212ENST00000497993 PIGBQ92521 554 aa7.59□□□□□ -1.19
TMEM39A-212ENST00000497993 KLRG1Q96E93 195 aa7.59□□□□□ -1.19
TMEM39A-212ENST00000497993 IFT43Q96FT9 208 aa7.59□□□□□ -1.19
TMEM39A-212ENST00000497993 ABHD17AQ96GS6 310 aa7.59□□□□□ -1.19
TMEM39A-212ENST00000497993 CEP63Q96MT8 703 aa7.59□□□□□ -1.19
TMEM39A-212ENST00000497993 FRMD6Q96NE9 622 aa7.59□□□□□ -1.19
TMEM39A-212ENST00000497993 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.59□□□□□ -1.197e-8■■■■□ 20.4
TMEM39A-212ENST00000497993 SAP130Q9H0E3 1048 aa7.59□□□□□ -1.19
TMEM39A-212ENST00000497993 STK32BQ9NY57 414 aa7.59□□□□□ -1.19
TMEM39A-212ENST00000497993 PNPLA7Q6ZV29 1317 aa7.58□□□□□ -1.2
TMEM39A-212ENST00000497993 MX2P20592 715 aa7.58□□□□□ -1.2
TMEM39A-212ENST00000497993 KCNQ4P56696 695 aa7.58□□□□□ -1.2
TMEM39A-212ENST00000497993 RNFT1Q5M7Z0 435 aa7.58□□□□□ -1.2
TMEM39A-212ENST00000497993 FILIP1Q7Z7B0 1213 aa7.58□□□□□ -1.2
TMEM39A-212ENST00000497993 USP48Q86UV5 1035 aa7.58□□□□□ -1.2
TMEM39A-212ENST00000497993 FAM129BQ96TA1 746 aa7.58□□□□□ -1.2
TMEM39A-212ENST00000497993 MTFR1LQ9H019 292 aa7.58□□□□□ -1.2
TMEM39A-212ENST00000497993 SPON1Q9HCB6 807 aa7.58□□□□□ -1.2
TMEM39A-212ENST00000497993 PCDH12Q9NPG4 1184 aa7.58□□□□□ -1.2
TMEM39A-212ENST00000497993 MARK1Q9P0L2 795 aa7.58□□□□□ -1.2
TMEM39A-212ENST00000497993 CNTNAP4Q9C0A0 1308 aa7.57□□□□□ -1.2
TMEM39A-212ENST00000497993 ARFGEF2Q9Y6D5 1785 aa7.57□□□□□ -1.2
TMEM39A-212ENST00000497993 LOC102724428A0A0B4J2F2 783 aa7.57□□□□□ -1.2
TMEM39A-212ENST00000497993 DCDC2BA2VCK2 349 aa7.57□□□□□ -1.2
TMEM39A-212ENST00000497993 K7ELQ4 463 aaPredicted RBP7.57□□□□□ -1.2
TMEM39A-212ENST00000497993 ENPP3O14638 875 aa7.57□□□□□ -1.2
TMEM39A-212ENST00000497993 PPP1R12AO14974 1030 aaPredicted RBP7.57□□□□□ -1.2
TMEM39A-212ENST00000497993 DNAJC6O75061 913 aa7.57□□□□□ -1.2
TMEM39A-212ENST00000497993 FGRP09769 529 aa7.57□□□□□ -1.2
TMEM39A-212ENST00000497993 SIK1P57059 783 aa7.57□□□□□ -1.2
TMEM39A-212ENST00000497993 KRT76Q01546 638 aa7.57□□□□□ -1.2
TMEM39A-212ENST00000497993 SRSF11Q05519 484 aaKnown RBP7.57□□□□□ -1.2
TMEM39A-212ENST00000497993 TYRO3Q06418 890 aa7.57□□□□□ -1.2
TMEM39A-212ENST00000497993 RALBP1Q15311 655 aa7.57□□□□□ -1.2
TMEM39A-212ENST00000497993 ENOX2Q16206 610 aaKnown RBP7.57□□□□□ -1.2
TMEM39A-212ENST00000497993 ZNF530Q6P9A1 599 aaPredicted RBP7.57□□□□□ -1.2
TMEM39A-212ENST00000497993 FBF1Q8TES7 1133 aa7.57□□□□□ -1.2
TMEM39A-212ENST00000497993 CNTNAP3BQ96NU0 1288 aa7.57□□□□□ -1.2
TMEM39A-212ENST00000497993 CNTNAP3Q9BZ76 1288 aa7.57□□□□□ -1.2
TMEM39A-212ENST00000497993 BRD7Q9NPI1 651 aa7.57□□□□□ -1.2
TMEM39A-212ENST00000497993 TMOD3Q9NYL9 352 aa7.57□□□□□ -1.2
TMEM39A-212ENST00000497993 STIM2Q9P246 746 aa7.57□□□□□ -1.2
TMEM39A-212ENST00000497993 CHPF2Q9P2E5 772 aa7.57□□□□□ -1.2
TMEM39A-212ENST00000497993 CCNL1Q9UK58 526 aaPredicted RBP7.57□□□□□ -1.2
TMEM39A-212ENST00000497993 WWC3Q9ULE0 1092 aa7.57□□□□□ -1.2
TMEM39A-212ENST00000497993 TNFRSF10BO14763 440 aa7.56□□□□□ -1.2
TMEM39A-212ENST00000497993 MICAL2O94851 1124 aa7.56□□□□□ -1.2
TMEM39A-212ENST00000497993 EPB42P16452 691 aa7.56□□□□□ -1.2
TMEM39A-212ENST00000497993 MAP2K3P46734 347 aa7.56□□□□□ -1.2
TMEM39A-212ENST00000497993 EIF1AXP47813 144 aaKnown RBP7.56□□□□□ -1.2
TMEM39A-212ENST00000497993 ZNF394Q53GI3 561 aa7.56□□□□□ -1.2
TMEM39A-212ENST00000497993 HS2ST1Q7LGA3 356 aa7.56□□□□□ -1.2
TMEM39A-212ENST00000497993 FLAD1Q8NFF5 587 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms