RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 BIN2Q9UBW5 565 aaPredicted RBP23.43■■□□□ 1.34
ACTN4-208ENST00000497637 F8W031 263 aaPredicted RBP23.42■■□□□ 1.34
ACTN4-208ENST00000497637 SEMA3EO15041 775 aa23.42■■□□□ 1.34
ACTN4-208ENST00000497637 IDH1O75874 414 aaKnown RBP23.42■■□□□ 1.34
ACTN4-208ENST00000497637 KLRK1P26718 216 aa23.42■■□□□ 1.34
ACTN4-208ENST00000497637 PSMC4P43686 418 aa23.42■■□□□ 1.34
ACTN4-208ENST00000497637 MAP3K12Q12852 859 aa23.42■■□□□ 1.34
ACTN4-208ENST00000497637 SNAPC2Q13487 334 aa23.42■■□□□ 1.34
ACTN4-208ENST00000497637 INTS4Q96HW7 963 aaKnown RBP23.42■■□□□ 1.34
ACTN4-208ENST00000497637 FOXD4L1Q9NU39 408 aa23.42■■□□□ 1.34
ACTN4-208ENST00000497637 CTNNA3Q9UI47 895 aa23.42■■□□□ 1.34
ACTN4-208ENST00000497637 PCDHAC2Q9Y5I4 1007 aa23.42■■□□□ 1.34
ACTN4-208ENST00000497637 UNC80Q8N2C7 3258 aa23.41■■□□□ 1.34
ACTN4-208ENST00000497637 TCRBV5S4A2TA0A5A2 114 aa23.41■■□□□ 1.34
ACTN4-208ENST00000497637 SPDYE5A6NIY4 337 aa23.41■■□□□ 1.34
ACTN4-208ENST00000497637 BMP8BP34820 402 aa23.41■■□□□ 1.34
ACTN4-208ENST00000497637 GYG1P46976 350 aa23.41■■□□□ 1.34
ACTN4-208ENST00000497637 AK2P54819 239 aa23.41■■□□□ 1.34
ACTN4-208ENST00000497637 NBR1Q14596 966 aa23.41■■□□□ 1.34
ACTN4-208ENST00000497637 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.41■■□□□ 1.349e-29■■□□□ 12.6
ACTN4-208ENST00000497637 U2AF1L4Q8WU68 220 aaKnown RBP23.41■■□□□ 1.34
ACTN4-208ENST00000497637 COL25A1Q9BXS0 654 aaPredicted RBP23.41■■□□□ 1.34
ACTN4-208ENST00000497637 PUS7LQ9H0K6 701 aaKnown RBP23.41■■□□□ 1.34
ACTN4-208ENST00000497637 DENND2AQ9ULE3 1009 aa23.41■■□□□ 1.34
ACTN4-208ENST00000497637 LIMCH1Q9UPQ0 1083 aa23.41■■□□□ 1.34
ACTN4-208ENST00000497637 PDS5AQ29RF7 1337 aaKnown RBP23.4■■□□□ 1.34
ACTN4-208ENST00000497637 ZNF532Q9HCE3 1301 aa23.4■■□□□ 1.34
ACTN4-208ENST00000497637 BTBD19C9JJ37 291 aa23.4■■□□□ 1.34
ACTN4-208ENST00000497637 BLOC1S2Q6QNY1 142 aa23.4■■□□□ 1.34
ACTN4-208ENST00000497637 C17orf99Q6UX52 265 aa23.4■■□□□ 1.34
ACTN4-208ENST00000497637 C15orf52Q6ZUT6 534 aaKnown RBP23.4■■□□□ 1.34
ACTN4-208ENST00000497637 ERO1BQ86YB8 467 aa23.4■■□□□ 1.34
ACTN4-208ENST00000497637 A0A1B0GUL6 1792 aa23.4■■□□□ 1.34
ACTN4-208ENST00000497637 GPAA1O43292 621 aa23.39■■□□□ 1.33
ACTN4-208ENST00000497637 FMNL1O95466 1100 aaPredicted RBP23.39■■□□□ 1.33
ACTN4-208ENST00000497637 CYP21A2P08686 494 aa23.39■■□□□ 1.33
ACTN4-208ENST00000497637 RPS6KB1P23443 525 aa23.39■■□□□ 1.33
ACTN4-208ENST00000497637 SPDYE2Q495Y8 402 aa23.39■■□□□ 1.33
ACTN4-208ENST00000497637 ZSCAN31Q96LW9 406 aaPredicted RBP23.39■■□□□ 1.33
ACTN4-208ENST00000497637 TAF6LQ9Y6J9 622 aa23.39■■□□□ 1.33
ACTN4-208ENST00000497637 IRS2Q9Y4H2 1338 aa23.38■■□□□ 1.33
ACTN4-208ENST00000497637 SGPL1O95470 568 aa23.38■■□□□ 1.33
ACTN4-208ENST00000497637 IL1R1P14778 569 aa23.38■■□□□ 1.33
ACTN4-208ENST00000497637 CPA1P15085 419 aa23.38■■□□□ 1.33
ACTN4-208ENST00000497637 OSBPP22059 807 aa23.38■■□□□ 1.33
ACTN4-208ENST00000497637 HIBADHP31937 336 aaKnown RBP23.38■■□□□ 1.33
ACTN4-208ENST00000497637 TNNI2P48788 182 aa23.38■■□□□ 1.33
ACTN4-208ENST00000497637 RAB3GAP1Q15042 981 aa23.38■■□□□ 1.33
ACTN4-208ENST00000497637 ZNF804AQ7Z570 1209 aa23.38■■□□□ 1.33
ACTN4-208ENST00000497637 VPS37DQ86XT2 251 aa23.38■■□□□ 1.33
ACTN4-208ENST00000497637 TEPSINQ96N21 525 aa23.38■■□□□ 1.33
ACTN4-208ENST00000497637 NEK1Q96PY6 1258 aa23.38■■□□□ 1.33
ACTN4-208ENST00000497637 ZNF70Q9UC06 446 aaPredicted RBP23.38■■□□□ 1.33
ACTN4-208ENST00000497637 MYPNQ86TC9 1320 aa23.37■■□□□ 1.33
ACTN4-208ENST00000497637 FOXP2O15409 715 aa23.37■■□□□ 1.33
ACTN4-208ENST00000497637 SLAIN1Q8ND83 568 aa23.37■■□□□ 1.33
ACTN4-208ENST00000497637 SERPINA10Q9UK55 444 aa23.37■■□□□ 1.33
ACTN4-208ENST00000497637 ECM29Q5VYK3 1845 aa23.37■■□□□ 1.33
ACTN4-208ENST00000497637 NUCB2P80303 420 aa23.36■■□□□ 1.33
ACTN4-208ENST00000497637 ANKRD1Q15327 319 aa23.36■■□□□ 1.33
ACTN4-208ENST00000497637 LRIT3Q3SXY7 679 aa23.36■■□□□ 1.33
ACTN4-208ENST00000497637 MAGEB6Q8N7X4 407 aa23.36■■□□□ 1.33
ACTN4-208ENST00000497637 MTMR10Q9NXD2 777 aa23.36■■□□□ 1.33
ACTN4-208ENST00000497637 HMGB1P09429 215 aaKnown RBP23.35■■□□□ 1.33
ACTN4-208ENST00000497637 ALX1Q15699 326 aa23.35■■□□□ 1.33
ACTN4-208ENST00000497637 NOL8Q76FK4 1167 aaKnown RBP23.35■■□□□ 1.33
ACTN4-208ENST00000497637 ZGPATQ8N5A5 531 aaKnown RBP23.35■■□□□ 1.33
ACTN4-208ENST00000497637 STRBPQ96SI9 672 aaKnown RBP23.35■■□□□ 1.33
ACTN4-208ENST00000497637 GDF15Q99988 308 aa23.35■■□□□ 1.33
ACTN4-208ENST00000497637 SH2B1Q9NRF2 756 aaPredicted RBP23.35■■□□□ 1.33
ACTN4-208ENST00000497637 MYH7P12883 1935 aa23.34■■□□□ 1.33
ACTN4-208ENST00000497637 IRF6O14896 467 aa23.34■■□□□ 1.33
ACTN4-208ENST00000497637 FRAT2O75474 233 aaPredicted RBP23.34■■□□□ 1.33
ACTN4-208ENST00000497637 PPIL2Q13356 520 aa23.34■■□□□ 1.33
ACTN4-208ENST00000497637 HOOK2Q96ED9 719 aa23.34■■□□□ 1.33
ACTN4-208ENST00000497637 LRP2BPQ9P2M1 347 aa23.34■■□□□ 1.33
ACTN4-208ENST00000497637 CPA4Q9UI42 421 aa23.34■■□□□ 1.33
ACTN4-208ENST00000497637 IGSF3O75054 1194 aa23.33■■□□□ 1.33
ACTN4-208ENST00000497637 FGAP02671 866 aa23.33■■□□□ 1.33
ACTN4-208ENST00000497637 TFRCP02786 760 aaKnown RBP23.33■■□□□ 1.33
ACTN4-208ENST00000497637 CTGFP29279 349 aa23.33■■□□□ 1.33
ACTN4-208ENST00000497637 STOX1Q6ZVD7 989 aa23.33■■□□□ 1.33
ACTN4-208ENST00000497637 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.33■■□□□ 1.33
ACTN4-208ENST00000497637 TMEM39BQ9GZU3 492 aa23.33■■□□□ 1.33
ACTN4-208ENST00000497637 IQSEC3Q9UPP2 1182 aaPredicted RBP23.33■■□□□ 1.33
ACTN4-208ENST00000497637 OTOFQ9HC10 1997 aa23.32■■□□□ 1.32
ACTN4-208ENST00000497637 FCGRTP55899 365 aa23.32■■□□□ 1.32
ACTN4-208ENST00000497637 IMMTQ16891 758 aaKnown RBP23.32■■□□□ 1.32
ACTN4-208ENST00000497637 TMED8Q6PL24 325 aaPredicted RBP23.32■■□□□ 1.32
ACTN4-208ENST00000497637 ANKRD23Q86SG2 305 aa23.32■■□□□ 1.32
ACTN4-208ENST00000497637 UNC93B1Q9H1C4 597 aa23.32■■□□□ 1.32
ACTN4-208ENST00000497637 TDRD3Q9H7E2 651 aaKnown RBP23.32■■□□□ 1.32
ACTN4-208ENST00000497637 SNCAIPQ9Y6H5 919 aa23.32■■□□□ 1.32
ACTN4-208ENST00000497637 DOCK2Q92608 1830 aa23.31■■□□□ 1.32
ACTN4-208ENST00000497637 E7EWF7 191 aa23.31■■□□□ 1.32
ACTN4-208ENST00000497637 ECM2O94769 699 aaPredicted RBP23.31■■□□□ 1.32
ACTN4-208ENST00000497637 Q7L0L9 218 aa23.31■■□□□ 1.32
ACTN4-208ENST00000497637 DHX32Q7L7V1 743 aaKnown RBP23.31■■□□□ 1.32
ACTN4-208ENST00000497637 TCP10L2B9ZVM9 353 aa23.3■■□□□ 1.32
ACTN4-208ENST00000497637 GNAT2P19087 354 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms