RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 MRVI1Q9Y6F6 885 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 SPATA31A5Q5VU36 1347 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 SPATA31A7Q8IWB4 1347 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 CICQ96RK0 1608 aaPredicted RBP3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 THSD7AQ9UPZ6 1657 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 DHX29Q7Z478 1369 aaKnown RBP3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 C10orf71Q711Q0 1435 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 PXDNLA1KZ92 1463 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 C1orf167Q5SNV9 1468 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 MKI67P46013 3256 aaKnown RBP3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 A0A1W2PNR3 127 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 MINDY4BA8MYZ0 360 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 UPK3BL1B0FP48 263 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 UPK3BL2E5RIL1 263 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 TPD52L2O43399 206 aaKnown RBP3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 GDF9O60383 454 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 MMP20O60882 483 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 ALDH1A1P00352 501 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 F13A1P00488 732 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 S100BP04271 92 aaPredicted RBP3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 CAPNS1P04632 268 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 CYP2E1P05181 493 aaPredicted RBP3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 POLD1P28340 1107 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 STAT3P40763 770 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 SLC19A1P41440 591 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 GRIA4P48058 902 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 PTPN5P54829 565 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 WDR4P57081 412 aaKnown RBP3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 TBX4P57082 545 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 ZNF252P-AS1Q0IIN9 211 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 FAAP100Q0VG06 881 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 IFRD2Q12894 506 aaPredicted RBP3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 CCINQ13939 588 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 CWF19L2Q2TBE0 894 aaKnown RBP3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 TKFCQ3LXA3 575 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 SLC27A3Q5K4L6 730 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 SNAP47Q5SQN1 464 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 TTC39BQ5VTQ0 682 aaPredicted RBP3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 INTS3Q68E01 1043 aaKnown RBP3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 DTHD1Q6ZMT9 781 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 LSRQ86X29 649 aaPredicted RBP3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 NINJ1Q92982 152 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 NXPE3Q969Y0 559 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 GAL3ST3Q96A11 431 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 IER2Q9BTL4 223 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 MYH16Q9H6N6 1097 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 BRD7Q9NPI1 651 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 LATS2Q9NRM7 1088 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 NDFIP2Q9NV92 336 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 TLR7Q9NYK1 1049 aaKnown RBP3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 HCSTQ9UBK5 93 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 RAPGEFL1Q9UHV5 662 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 ZMYM5Q9UJ78 669 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 TLR6Q9Y2C9 796 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 USP20Q9Y2K6 914 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 THRAP3Q9Y2W1 955 aaKnown RBP3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 DYRK1BQ9Y463 629 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 NWD2Q9ULI1 1742 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 CDC42BPBQ9Y5S2 1711 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 CNTNAP1P78357 1384 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 BDP1A6H8Y1 2624 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 NOS1P29475 1434 aa3.35□□□□□ -1.87
CKS1BP2-201ENST00000497342 ATRXP46100 2492 aa3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 INO80Q9ULG1 1556 aaPredicted RBP3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 CTTNBP2Q8WZ74 1663 aa3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 RGPD3A6NKT7 1758 aaPredicted RBP3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 RGPD4Q7Z3J3 1758 aa3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 A0A087X0B3 334 aa3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 ALG1L2C9J202 215 aa3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 ADCY3O60266 1144 aa3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 B3GALT4O96024 378 aa3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 SMPD1P17405 629 aa3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 NRLP54845 237 aa3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 CHMP4BP1P59074 171 aa3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 RELBQ01201 579 aa3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 NFE2Q16621 373 aaPredicted RBP3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 LRRC69Q6ZNQ3 347 aa3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 LINC00528Q8N1L1 170 aa3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 ZSWIM2Q8NEG5 633 aa3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 PLD4Q96BZ4 506 aa3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 ANAPC16Q96DE5 110 aa3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 SGSM3Q96HU1 749 aa3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 TM9SF2Q99805 663 aa3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 ZNF700Q9H0M5 742 aa3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 TNKS2Q9H2K2 1166 aa3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 ZNF395Q9H8N7 513 aaPredicted RBP3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 INTS7Q9NVH2 962 aaKnown RBP3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 ZFATQ9P243 1243 aa3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 PPT2Q9UMR5 302 aa3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 KCNH4Q9UQ05 1017 aa3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 LEMD3Q9Y2U8 911 aa3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 R3HCC1Q9Y3T6 440 aaKnown RBP3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 SLC12A7Q9Y666 1083 aa3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 PTCH2Q9Y6C5 1203 aa3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 WASF2Q9Y6W5 498 aa3.34□□□□□ -1.87
CKS1BP2-201ENST00000497342 PIK3R4Q99570 1358 aa3.34□□□□□ -1.88
CKS1BP2-201ENST00000497342 ANKRD11Q6UB99 2663 aaPredicted RBP3.34□□□□□ -1.88
CKS1BP2-201ENST00000497342 MUC3AQ02505 3323 aa3.34□□□□□ -1.88
CKS1BP2-201ENST00000497342 ABCA3Q99758 1704 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms