RNA–Protein interactions for RNA: ENST00000496826.1

USF3-204, Transcript of upstream transcription factor family member 3, humanhuman

TSL 1 (best)

Gene USF3, Length 8,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-204ENST00000496826 ACTN4O43707 911 aaKnown RBP6.45□□□□□ -1.38
USF3-204ENST00000496826 SCG2P13521 617 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 EXOSC9Q06265 439 aaKnown RBP6.45□□□□□ -1.38
USF3-204ENST00000496826 TMEM259Q4ZIN3 620 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 CRELD1Q96HD1 420 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 CENPKQ9BS16 269 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 H3BUI4 141 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 PYGBP11216 843 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 GCLCP48506 637 aaPredicted RBP6.45□□□□□ -1.38
USF3-204ENST00000496826 NLRP6P59044 892 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 PTGDRQ13258 359 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 TUBGCP3Q96CW5 907 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 CCDC42Q96M95 316 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 NEK6Q9HC98 313 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 RAB3GAP2Q9H2M9 1393 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 H7C1W4 665 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 NPR1P16066 1061 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 CYLC1P35663 651 aaPredicted RBP6.45□□□□□ -1.38
USF3-204ENST00000496826 ATXN3P54252 364 aaPredicted RBP6.45□□□□□ -1.38
USF3-204ENST00000496826 CNNM4Q6P4Q7 775 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 TRAF7Q6Q0C0 670 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 ASCC2Q9H1I8 757 aaPredicted RBP6.45□□□□□ -1.38
USF3-204ENST00000496826 ZBTB1Q9Y2K1 713 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 CCDC166P0CW27 439 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 CTTNQ14247 550 aaKnown RBP6.45□□□□□ -1.38
USF3-204ENST00000496826 CEP57Q86XR8 500 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 RMDN2Q96LZ7 410 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 ZFP42Q96MM3 310 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 MED4Q9NPJ6 270 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 PACSIN3Q9UKS6 424 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 TRPC6Q9Y210 931 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 A0A1B0GVL5 298 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 C16orf96A6NNT2 1141 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 H0Y626 953 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 FKBP9O95302 570 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 MPOP05164 745 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 FKBP9P1Q75LS8 142 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 ZSCAN29Q8IWY8 852 aaPredicted RBP6.45□□□□□ -1.38
USF3-204ENST00000496826 FAM76AQ8TAV0 307 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 SELENOSQ9BQE4 189 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 RIOK1Q9BRS2 568 aaKnown RBP6.45□□□□□ -1.38
USF3-204ENST00000496826 ZEB2O60315 1214 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 STX10O60499 249 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 SLC4A1P02730 911 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 KRT20P35900 424 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 OCA2Q04671 838 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 HABP4Q5JVS0 413 aaKnown RBP6.45□□□□□ -1.38
USF3-204ENST00000496826 DENND6AQ8IWF6 608 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 C22orf23Q9BZE7 217 aa6.45□□□□□ -1.38
USF3-204ENST00000496826 PSMD12O00232 456 aaPredicted RBP6.44□□□□□ -1.38
USF3-204ENST00000496826 TRHP20396 242 aaPredicted RBP6.44□□□□□ -1.38
USF3-204ENST00000496826 SPAG1Q07617 926 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 KLHL24Q6TFL4 600 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 AHI1Q8N157 1196 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 CCDC26Q8TAB7 109 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 LTV1Q96GA3 475 aaPredicted RBP6.44□□□□□ -1.38
USF3-204ENST00000496826 CDCA7LQ96GN5 454 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 RNF41Q9H4P4 317 aaPredicted RBP6.44□□□□□ -1.38
USF3-204ENST00000496826 CDC40O60508 579 aaKnown RBP eCLIP6.44□□□□□ -1.38
USF3-204ENST00000496826 SLC4A3P48751 1232 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 GABPB1Q06547 395 aaPredicted RBP6.44□□□□□ -1.38
USF3-204ENST00000496826 MKRN3Q13064 507 aaKnown RBP6.44□□□□□ -1.38
USF3-204ENST00000496826 DIXDC1Q155Q3 683 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 DAB2IPQ5VWQ8 1189 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 NBPF11Q86T75 865 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 TBC1D19Q8N5T2 526 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 EFHBQ8N7U6 833 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 IFIT3O14879 490 aaKnown RBP6.44□□□□□ -1.38
USF3-204ENST00000496826 KRT81Q14533 505 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 PTPN14Q15678 1187 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 ATAD3BQ5T9A4 648 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 ADALQ6DHV7 355 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 TXNDC2Q86VQ3 553 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 SYMPKQ92797 1274 aaKnown RBP6.44□□□□□ -1.38
USF3-204ENST00000496826 GALNT8Q9NY28 637 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 ARHGAP26Q9UNA1 814 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 GNAI2P04899 355 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 GJC1P36383 396 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 ARHGAP44Q17R89 818 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 TTC31Q49AM3 519 aaPredicted RBP6.44□□□□□ -1.38
USF3-204ENST00000496826 TMTC4Q5T4D3 741 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 AP1ARQ63HQ0 302 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 WDR75Q8IWA0 830 aaKnown RBP6.44□□□□□ -1.38
USF3-204ENST00000496826 SLC17A8Q8NDX2 589 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 SPDYE1Q8NFV5 336 aaPredicted RBP6.44□□□□□ -1.38
USF3-204ENST00000496826 DIS3LQ8TF46 1054 aaKnown RBP6.44□□□□□ -1.38
USF3-204ENST00000496826 JDP2Q8WYK2 163 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 C18orf25Q96B23 403 aaPredicted RBP6.44□□□□□ -1.38
USF3-204ENST00000496826 PUF60Q9UHX1 559 aaKnown RBP6.44□□□□□ -1.38
USF3-204ENST00000496826 BTBD18B2RXH4 712 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 HGSO14964 777 aaPredicted RBP6.44□□□□□ -1.38
USF3-204ENST00000496826 P4HA1P13674 534 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 STX2P32856 288 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 CIITAP33076 1130 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 COPB1P53618 953 aaKnown RBP6.44□□□□□ -1.38
USF3-204ENST00000496826 FSCBQ5H9T9 825 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 LRRC49Q8IUZ0 686 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 PARVGQ9HBI0 331 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 OATP04181 439 aa6.44□□□□□ -1.38
USF3-204ENST00000496826 HNRNPCP07910 306 aaKnown RBP eCLIP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms