RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 LIN37Q96GY3 246 aaPredicted RBP6.7□□□□□ -1.34
CD46-218ENST00000496723 CCDC120Q96HB5 630 aa6.7□□□□□ -1.34
CD46-218ENST00000496723 FRMD6Q96NE9 622 aa6.7□□□□□ -1.34
CD46-218ENST00000496723 FAM8A1Q9UBU6 413 aa6.7□□□□□ -1.34
CD46-218ENST00000496723 PARP2Q9UGN5 583 aa6.7□□□□□ -1.34
CD46-218ENST00000496723 FAM155AB1AL88 458 aaPredicted RBP6.69□□□□□ -1.34
CD46-218ENST00000496723 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.69□□□□□ -1.34
CD46-218ENST00000496723 ZNF865P0CJ78 1059 aaPredicted RBP6.69□□□□□ -1.34
CD46-218ENST00000496723 GDNFP39905 211 aa6.69□□□□□ -1.34
CD46-218ENST00000496723 TAGLNQ01995 201 aaKnown RBP6.69□□□□□ -1.34
CD46-218ENST00000496723 FYB2Q5VWT5 728 aa6.69□□□□□ -1.34
CD46-218ENST00000496723 KIRREL1Q96J84 757 aa6.69□□□□□ -1.34
CD46-218ENST00000496723 SEMA3GQ9NS98 782 aa6.69□□□□□ -1.34
CD46-218ENST00000496723 SLITRK5O94991 958 aa6.68□□□□□ -1.34
CD46-218ENST00000496723 USP17L7P0C7H9 530 aa6.68□□□□□ -1.34
CD46-218ENST00000496723 EIF4BP23588 611 aaKnown RBP6.68□□□□□ -1.34
CD46-218ENST00000496723 MFAP1P55081 439 aaKnown RBP6.68□□□□□ -1.34
CD46-218ENST00000496723 XPCQ01831 940 aaPredicted RBP6.68□□□□□ -1.34
CD46-218ENST00000496723 TMEM67Q5HYA8 995 aa6.68□□□□□ -1.34
CD46-218ENST00000496723 ZNF746Q6NUN9 644 aaPredicted RBP6.68□□□□□ -1.34
CD46-218ENST00000496723 MPZL3Q6UWV2 235 aa6.68□□□□□ -1.34
CD46-218ENST00000496723 HDXQ7Z353 690 aa6.68□□□□□ -1.34
CD46-218ENST00000496723 MFSD4AQ8N468 514 aa6.68□□□□□ -1.34
CD46-218ENST00000496723 MFSD2AQ8NA29 543 aa6.68□□□□□ -1.34
CD46-218ENST00000496723 ZSCAN18Q8TBC5 510 aaPredicted RBP6.68□□□□□ -1.34
CD46-218ENST00000496723 COX4I2Q96KJ9 171 aa6.68□□□□□ -1.34
CD46-218ENST00000496723 HSPA12BQ96MM6 686 aa6.68□□□□□ -1.34
CD46-218ENST00000496723 CARS2Q9HA77 564 aaKnown RBP6.68□□□□□ -1.34
CD46-218ENST00000496723 AK5Q9Y6K8 562 aa6.68□□□□□ -1.34
CD46-218ENST00000496723 FBXO24O75426 580 aa6.67□□□□□ -1.34
CD46-218ENST00000496723 PSMD2Q13200 908 aa6.67□□□□□ -1.34
CD46-218ENST00000496723 SFRP5Q5T4F7 317 aa6.67□□□□□ -1.34
CD46-218ENST00000496723 THAP5Q7Z6K1 395 aa6.67□□□□□ -1.34
CD46-218ENST00000496723 ANKLE2Q86XL3 938 aa6.67□□□□□ -1.34
CD46-218ENST00000496723 SIAH1Q8IUQ4 282 aa6.67□□□□□ -1.34
CD46-218ENST00000496723 FAM161BQ96MY7 647 aa6.67□□□□□ -1.34
CD46-218ENST00000496723 ATP13A1Q9HD20 1204 aa6.67□□□□□ -1.34
CD46-218ENST00000496723 TPX2Q9ULW0 747 aaKnown RBP6.67□□□□□ -1.34
CD46-218ENST00000496723 CFPP27918 469 aa6.66□□□□□ -1.34
CD46-218ENST00000496723 DAB2P98082 770 aa6.66□□□□□ -1.34
CD46-218ENST00000496723 SLBPQ14493 270 aaKnown RBP eCLIP6.66□□□□□ -1.34
CD46-218ENST00000496723 PCNX4Q63HM2 1172 aa6.66□□□□□ -1.34
CD46-218ENST00000496723 BCL2L13Q9BXK5 485 aa6.66□□□□□ -1.34
CD46-218ENST00000496723 WNT10AQ9GZT5 417 aa6.66□□□□□ -1.34
CD46-218ENST00000496723 C19orf73Q9NVV2 129 aa6.66□□□□□ -1.34
CD46-218ENST00000496723 SNCAIPQ9Y6H5 919 aa6.66□□□□□ -1.34
CD46-218ENST00000496723 CAPN6Q9Y6Q1 641 aa6.66□□□□□ -1.34
CD46-218ENST00000496723 INPP5AQ14642 412 aa6.65□□□□□ -1.34
CD46-218ENST00000496723 RASIP1Q5U651 963 aa6.65□□□□□ -1.34
CD46-218ENST00000496723 CDKAL1Q5VV42 579 aa6.65□□□□□ -1.34
CD46-218ENST00000496723 LRFN4Q6PJG9 635 aa6.65□□□□□ -1.34
CD46-218ENST00000496723 PRR23BQ6ZRT6 265 aa6.65□□□□□ -1.34
CD46-218ENST00000496723 SYDE1Q6ZW31 735 aaPredicted RBP6.65□□□□□ -1.34
CD46-218ENST00000496723 TTF2Q9UNY4 1162 aaKnown RBP6.65□□□□□ -1.34
CD46-218ENST00000496723 ST14Q9Y5Y6 855 aa6.65□□□□□ -1.34
CD46-218ENST00000496723 PRAMEF27A3QJZ7 478 aa6.64□□□□□ -1.35
CD46-218ENST00000496723 PRR33A8MZF0 331 aa6.64□□□□□ -1.35
CD46-218ENST00000496723 CYP7A1P22680 504 aa6.64□□□□□ -1.35
CD46-218ENST00000496723 SV2BQ7L1I2 683 aa6.64□□□□□ -1.35
CD46-218ENST00000496723 TMC4Q7Z404 712 aa6.64□□□□□ -1.35
CD46-218ENST00000496723 HID1Q8IV36 788 aa6.64□□□□□ -1.35
CD46-218ENST00000496723 LRRC56Q8IYG6 542 aaPredicted RBP6.64□□□□□ -1.35
CD46-218ENST00000496723 FBXO15Q8NCQ5 510 aaPredicted RBP6.64□□□□□ -1.35
CD46-218ENST00000496723 GIPC2Q8TF65 315 aa6.64□□□□□ -1.35
CD46-218ENST00000496723 MIPEPQ99797 713 aa6.64□□□□□ -1.35
CD46-218ENST00000496723 FBRSQ9HAH7 460 aa6.64□□□□□ -1.35
CD46-218ENST00000496723 KIR3DL1P43629 444 aa6.63□□□□□ -1.35
CD46-218ENST00000496723 ETF1P62495 437 aaKnown RBP6.63□□□□□ -1.35
CD46-218ENST00000496723 ZNF326Q5BKZ1 582 aaKnown RBP6.63□□□□□ -1.35
CD46-218ENST00000496723 LETMD1Q6P1Q0 360 aa6.63□□□□□ -1.35
CD46-218ENST00000496723 C1QL4Q86Z23 238 aa6.63□□□□□ -1.35
CD46-218ENST00000496723 PLPPR2Q96GM1 343 aa6.63□□□□□ -1.35
CD46-218ENST00000496723 ALPK1Q96QP1 1244 aa6.63□□□□□ -1.35
CD46-218ENST00000496723 MRS2Q9HD23 443 aa6.63□□□□□ -1.35
CD46-218ENST00000496723 TACC3Q9Y6A5 838 aa6.63□□□□□ -1.35
CD46-218ENST00000496723 CNTNAP4Q9C0A0 1308 aa6.62□□□□□ -1.35
CD46-218ENST00000496723 H3BS24 57 aa6.62□□□□□ -1.35
CD46-218ENST00000496723 NFIBO00712 420 aa6.62□□□□□ -1.35
CD46-218ENST00000496723 SORBS3O60504 671 aa6.62□□□□□ -1.35
CD46-218ENST00000496723 CELA3AP09093 270 aa6.62□□□□□ -1.35
CD46-218ENST00000496723 RAC2P15153 192 aa6.62□□□□□ -1.35
CD46-218ENST00000496723 NKG7Q16617 165 aa6.62□□□□□ -1.35
CD46-218ENST00000496723 CST3P01034 146 aaPredicted RBP6.61□□□□□ -1.35
CD46-218ENST00000496723 PTPN11Q06124 597 aaPredicted RBP6.61□□□□□ -1.35
CD46-218ENST00000496723 MEI1Q5TIA1 1274 aa6.61□□□□□ -1.35
CD46-218ENST00000496723 TMPRSS7Q7RTY8 843 aa6.61□□□□□ -1.35
CD46-218ENST00000496723 PIWIL2Q8TC59 973 aaKnown RBP6.61□□□□□ -1.35
CD46-218ENST00000496723 UBE2FQ969M7 185 aa6.61□□□□□ -1.35
CD46-218ENST00000496723 VTI1BQ9UEU0 232 aa6.61□□□□□ -1.35
CD46-218ENST00000496723 KRT1P04264 644 aa6.6□□□□□ -1.35
CD46-218ENST00000496723 CTSHP09668 335 aa6.6□□□□□ -1.35
CD46-218ENST00000496723 C1QTNF9P0C862 333 aa6.6□□□□□ -1.35
CD46-218ENST00000496723 ZSCAN22P10073 491 aaPredicted RBP6.6□□□□□ -1.35
CD46-218ENST00000496723 RPS26P62854 115 aaKnown RBP6.6□□□□□ -1.35
CD46-218ENST00000496723 CCDC85BQ15834 202 aaPredicted RBP6.6□□□□□ -1.35
CD46-218ENST00000496723 WIPI1Q5MNZ9 446 aaPredicted RBP6.6□□□□□ -1.35
CD46-218ENST00000496723 LCNL1Q6ZST4 164 aa6.6□□□□□ -1.35
CD46-218ENST00000496723 AMIGO3Q86WK7 504 aa6.6□□□□□ -1.35
CD46-218ENST00000496723 RIN3Q8TB24 985 aa6.6□□□□□ -1.35
CD46-218ENST00000496723 GAL3ST3Q96A11 431 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms