RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 HAND2P61296 217 aa11.21□□□□□ -0.61
ACTN4-207ENST00000495553 FGD1P98174 961 aa11.21□□□□□ -0.61
ACTN4-207ENST00000495553 KIF23Q02241 960 aaPredicted RBP11.21□□□□□ -0.61
ACTN4-207ENST00000495553 MAP2K1Q02750 393 aaPredicted RBP11.21□□□□□ -0.61
ACTN4-207ENST00000495553 MAP3K10Q02779 954 aa11.21□□□□□ -0.61
ACTN4-207ENST00000495553 SART3Q15020 963 aaKnown RBP11.21□□□□□ -0.61
ACTN4-207ENST00000495553 RABEP1Q15276 862 aa11.21□□□□□ -0.61
ACTN4-207ENST00000495553 TSGA10IPQ3SY00 556 aa11.21□□□□□ -0.61
ACTN4-207ENST00000495553 AKNAD1Q5T1N1 836 aa11.21□□□□□ -0.61
ACTN4-207ENST00000495553 C12orf60Q5U649 245 aa11.21□□□□□ -0.61
ACTN4-207ENST00000495553 NCOA7Q8NI08 942 aa11.21□□□□□ -0.61
ACTN4-207ENST00000495553 BEGAINQ9BUH8 593 aa11.21□□□□□ -0.61
ACTN4-207ENST00000495553 TM6SF1Q9BZW5 370 aa11.21□□□□□ -0.61
ACTN4-207ENST00000495553 PICK1Q9NRD5 415 aa11.21□□□□□ -0.61
ACTN4-207ENST00000495553 SWAP70Q9UH65 585 aa11.21□□□□□ -0.61
ACTN4-207ENST00000495553 ZNF112Q9UJU3 913 aa11.21□□□□□ -0.61
ACTN4-207ENST00000495553 CYP46A1Q9Y6A2 500 aa11.21□□□□□ -0.61
ACTN4-207ENST00000495553 PHF20L1A8MW92 1017 aa11.2□□□□□ -0.62
ACTN4-207ENST00000495553 E7EWF7 191 aa11.2□□□□□ -0.62
ACTN4-207ENST00000495553 FOXP2O15409 715 aa11.2□□□□□ -0.62
ACTN4-207ENST00000495553 CTNND1O60716 968 aaKnown RBP11.2□□□□□ -0.62
ACTN4-207ENST00000495553 SLURP2P0DP57 97 aa11.2□□□□□ -0.62
ACTN4-207ENST00000495553 ZBTB48P10074 688 aaPredicted RBP11.2□□□□□ -0.62
ACTN4-207ENST00000495553 CASTP20810 708 aaKnown RBP11.2□□□□□ -0.62
ACTN4-207ENST00000495553 SPRYD7Q5W111 196 aa11.2□□□□□ -0.62
ACTN4-207ENST00000495553 BLOC1S2Q6QNY1 142 aa11.2□□□□□ -0.62
ACTN4-207ENST00000495553 ERO1BQ86YB8 467 aa11.2□□□□□ -0.62
ACTN4-207ENST00000495553 REM2Q8IYK8 340 aaPredicted RBP11.2□□□□□ -0.62
ACTN4-207ENST00000495553 ZNF444Q8N0Y2 327 aaPredicted RBP11.2□□□□□ -0.62
ACTN4-207ENST00000495553 STAG1Q8WVM7 1258 aa11.2□□□□□ -0.62
ACTN4-207ENST00000495553 ESR2Q92731 530 aa11.2□□□□□ -0.62
ACTN4-207ENST00000495553 KCNB2Q92953 911 aa11.2□□□□□ -0.62
ACTN4-207ENST00000495553 OPTNQ96CV9 577 aa11.2□□□□□ -0.62
ACTN4-207ENST00000495553 WNK4Q96J92 1243 aa11.2□□□□□ -0.62
ACTN4-207ENST00000495553 JAKMIP1Q96N16 626 aaKnown RBP11.2□□□□□ -0.62
ACTN4-207ENST00000495553 NEK1Q96PY6 1258 aa11.2□□□□□ -0.62
ACTN4-207ENST00000495553 SERPINB13Q9UIV8 391 aa11.2□□□□□ -0.62
ACTN4-207ENST00000495553 SNX14Q9Y5W7 946 aa11.2□□□□□ -0.62
ACTN4-207ENST00000495553 NAV1Q8NEY1 1877 aa11.2□□□□□ -0.62
ACTN4-207ENST00000495553 TRPM7Q96QT4 1865 aa11.2□□□□□ -0.62
ACTN4-207ENST00000495553 ECM29Q5VYK3 1845 aa11.2□□□□□ -0.62
ACTN4-207ENST00000495553 ERICH2A1L162 156 aa11.19□□□□□ -0.62
ACTN4-207ENST00000495553 MCM5P33992 734 aa11.19□□□□□ -0.62
ACTN4-207ENST00000495553 PLCD1P51178 756 aa11.19□□□□□ -0.62
ACTN4-207ENST00000495553 CTDSPL2Q05D32 466 aa11.19□□□□□ -0.62
ACTN4-207ENST00000495553 SREBF2Q12772 1141 aa11.19□□□□□ -0.62
ACTN4-207ENST00000495553 ANKRD1Q15327 319 aa11.19□□□□□ -0.62
ACTN4-207ENST00000495553 CCDC178Q5BJE1 867 aa11.19□□□□□ -0.62
ACTN4-207ENST00000495553 RRP12Q5JTH9 1297 aaKnown RBP11.19□□□□□ -0.62
ACTN4-207ENST00000495553 PPP4R3BQ5MIZ7 849 aa11.19□□□□□ -0.62
ACTN4-207ENST00000495553 NOL9Q5SY16 702 aaKnown RBP11.19□□□□□ -0.62
ACTN4-207ENST00000495553 METTL16Q86W50 562 aaKnown RBP11.19□□□□□ -0.62
ACTN4-207ENST00000495553 SCYL3Q8IZE3 742 aa11.19□□□□□ -0.62
ACTN4-207ENST00000495553 OTUD5Q96G74 571 aa11.19□□□□□ -0.62
ACTN4-207ENST00000495553 ZIC5Q96T25 663 aa11.19□□□□□ -0.62
ACTN4-207ENST00000495553 EHD4Q9H223 541 aa11.19□□□□□ -0.62
ACTN4-207ENST00000495553 SNCAIPQ9Y6H5 919 aa11.19□□□□□ -0.62
ACTN4-207ENST00000495553 ROBO3Q96MS0 1386 aa11.18□□□□□ -0.62
ACTN4-207ENST00000495553 MANSC4A6NHS7 340 aaPredicted RBP11.18□□□□□ -0.62
ACTN4-207ENST00000495553 SPDYE5A6NIY4 337 aa11.18□□□□□ -0.62
ACTN4-207ENST00000495553 MCM2P49736 904 aa11.18□□□□□ -0.62
ACTN4-207ENST00000495553 PPATQ06203 517 aa11.18□□□□□ -0.62
ACTN4-207ENST00000495553 C16orf86Q6ZW13 317 aa11.18□□□□□ -0.62
ACTN4-207ENST00000495553 IQCA1Q86XH1 822 aa11.18□□□□□ -0.62
ACTN4-207ENST00000495553 CNKSR2Q8WXI2 1034 aa11.18□□□□□ -0.62
ACTN4-207ENST00000495553 UBAC1Q9BSL1 405 aa11.18□□□□□ -0.62
ACTN4-207ENST00000495553 DAXXQ9UER7 740 aaPredicted RBP11.18□□□□□ -0.62
ACTN4-207ENST00000495553 FOCADQ5VW36 1801 aa11.18□□□□□ -0.62
ACTN4-207ENST00000495553 MYH1P12882 1939 aa11.17□□□□□ -0.62
ACTN4-207ENST00000495553 WDR19Q8NEZ3 1342 aa11.17□□□□□ -0.62
ACTN4-207ENST00000495553 LAMA4Q16363 1823 aa11.17□□□□□ -0.62
ACTN4-207ENST00000495553 TSPY2A6NKD2 308 aa11.17□□□□□ -0.62
ACTN4-207ENST00000495553 ORC4O43929 436 aa11.17□□□□□ -0.62
ACTN4-207ENST00000495553 RANBP6O60518 1105 aaKnown RBP11.17□□□□□ -0.62
ACTN4-207ENST00000495553 CYP2D6P10635 497 aa11.17□□□□□ -0.62
ACTN4-207ENST00000495553 GJA5P36382 358 aa11.17□□□□□ -0.62
ACTN4-207ENST00000495553 CAP2P40123 477 aa11.17□□□□□ -0.62
ACTN4-207ENST00000495553 NEK4P51957 841 aa11.17□□□□□ -0.62
ACTN4-207ENST00000495553 GTF2A2P52657 109 aa11.17□□□□□ -0.62
ACTN4-207ENST00000495553 INHBEP58166 350 aa11.17□□□□□ -0.62
ACTN4-207ENST00000495553 PPIL2Q13356 520 aa11.17□□□□□ -0.62
ACTN4-207ENST00000495553 SNAPC2Q13487 334 aa11.17□□□□□ -0.62
ACTN4-207ENST00000495553 BECN1Q14457 450 aa11.17□□□□□ -0.62
ACTN4-207ENST00000495553 RUFY3Q7L099 469 aa11.17□□□□□ -0.62
ACTN4-207ENST00000495553 DHX32Q7L7V1 743 aaKnown RBP11.17□□□□□ -0.62
ACTN4-207ENST00000495553 RASEFQ8IZ41 740 aa11.17□□□□□ -0.62
ACTN4-207ENST00000495553 STK11IPQ8N1F8 1099 aa11.17□□□□□ -0.62
ACTN4-207ENST00000495553 IL17RAQ96F46 866 aa11.17□□□□□ -0.62
ACTN4-207ENST00000495553 CCDC17Q96LX7 622 aa11.17□□□□□ -0.62
ACTN4-207ENST00000495553 DNAJC18Q9H819 358 aa11.17□□□□□ -0.62
ACTN4-207ENST00000495553 WBP1LQ9NX94 342 aa11.17□□□□□ -0.62
ACTN4-207ENST00000495553 ZHX2Q9Y6X8 837 aa11.17□□□□□ -0.62
ACTN4-207ENST00000495553 BAZ2AQ9UIF9 1905 aaKnown RBP11.17□□□□□ -0.62
ACTN4-207ENST00000495553 LAMB1P07942 1786 aa11.16□□□□□ -0.62
ACTN4-207ENST00000495553 CYP2D7A0A087X1C5 515 aa11.16□□□□□ -0.62
ACTN4-207ENST00000495553 IRF6O14896 467 aa11.16□□□□□ -0.62
ACTN4-207ENST00000495553 CA12O43570 354 aa11.16□□□□□ -0.62
ACTN4-207ENST00000495553 GDF11O95390 407 aa11.16□□□□□ -0.62
ACTN4-207ENST00000495553 ASNSP08243 561 aa11.16□□□□□ -0.62
ACTN4-207ENST00000495553 TSPY3P0CV98 308 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 354 ms