RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 BEGAINQ9BUH8 593 aa14.87□□□□□ -0.03
TRA2A-209ENST00000494255 GTF2A2P52657 109 aa14.87□□□□□ -0.03
TRA2A-209ENST00000494255 EVX2Q03828 476 aa14.87□□□□□ -0.03
TRA2A-209ENST00000494255 RRP1BQ14684 758 aaKnown RBP14.87□□□□□ -0.03
TRA2A-209ENST00000494255 CASC1Q6TDU7 716 aa14.87□□□□□ -0.03
TRA2A-209ENST00000494255 C16orf86Q6ZW13 317 aa14.87□□□□□ -0.03
TRA2A-209ENST00000494255 SLC44A5Q8NCS7 719 aa14.87□□□□□ -0.03
TRA2A-209ENST00000494255 ZNF287Q9HBT7 754 aa14.87□□□□□ -0.03
TRA2A-209ENST00000494255 CABP5Q9NP86 173 aa14.87□□□□□ -0.03
TRA2A-209ENST00000494255 ZHX2Q9Y6X8 837 aa14.87□□□□□ -0.03
TRA2A-209ENST00000494255 USP17L5A8MUK1 530 aa14.86□□□□□ -0.03
TRA2A-209ENST00000494255 FOXP2O15409 715 aa14.86□□□□□ -0.03
TRA2A-209ENST00000494255 CDK8P49336 464 aa14.86□□□□□ -0.03
TRA2A-209ENST00000494255 INHBEP58166 350 aa14.86□□□□□ -0.03
TRA2A-209ENST00000494255 PPARAQ07869 468 aa14.86□□□□□ -0.03
TRA2A-209ENST00000494255 SNAPC2Q13487 334 aa14.86□□□□□ -0.03
TRA2A-209ENST00000494255 ABCB5Q2M3G0 1257 aa14.86□□□□□ -0.03
TRA2A-209ENST00000494255 TBC1D2Q9BYX2 928 aa14.86□□□□□ -0.03
TRA2A-209ENST00000494255 AS3MTQ9HBK9 375 aa14.86□□□□□ -0.03
TRA2A-209ENST00000494255 ZBTB21Q9ULJ3 1066 aa14.86□□□□□ -0.03
TRA2A-209ENST00000494255 ROBO3Q96MS0 1386 aa14.86□□□□□ -0.03
TRA2A-209ENST00000494255 ZMYM6O95789 1325 aa14.85□□□□□ -0.03
TRA2A-209ENST00000494255 MPHOSPH10O00566 681 aaKnown RBP14.85□□□□□ -0.03
TRA2A-209ENST00000494255 IRF6O14896 467 aa14.85□□□□□ -0.03
TRA2A-209ENST00000494255 STK11IPQ8N1F8 1099 aa14.85□□□□□ -0.03
TRA2A-209ENST00000494255 CCDC17Q96LX7 622 aa14.85□□□□□ -0.03
TRA2A-209ENST00000494255 DSCC1Q9BVC3 393 aa14.85□□□□□ -0.03
TRA2A-209ENST00000494255 MKNK2Q9HBH9 465 aa14.85□□□□□ -0.03
TRA2A-209ENST00000494255 SMIM22K7EJ46 135 aa14.84□□□□□ -0.03
TRA2A-209ENST00000494255 CXCL11O14625 94 aa14.84□□□□□ -0.03
TRA2A-209ENST00000494255 CDC45O75419 566 aa14.84□□□□□ -0.03
TRA2A-209ENST00000494255 GH2P01242 217 aa14.84□□□□□ -0.03
TRA2A-209ENST00000494255 FGAP02671 866 aa14.84□□□□□ -0.03
TRA2A-209ENST00000494255 CETPP11597 493 aa14.84□□□□□ -0.03
TRA2A-209ENST00000494255 PDE4BQ07343 736 aa14.84□□□□□ -0.03
TRA2A-209ENST00000494255 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.84□□□□□ -0.03
TRA2A-209ENST00000494255 KCNH4Q9UQ05 1017 aa14.84□□□□□ -0.03
TRA2A-209ENST00000494255 CCL15-CCL14A0A0B4J2E2 113 aa14.84□□□□□ -0.03
TRA2A-209ENST00000494255 SGSM2O43147 1006 aa14.84□□□□□ -0.03
TRA2A-209ENST00000494255 TM4SF4P48230 202 aa14.84□□□□□ -0.03
TRA2A-209ENST00000494255 CCL15Q16663 113 aa14.84□□□□□ -0.03
TRA2A-209ENST00000494255 OTUD7BQ6GQQ9 843 aa14.84□□□□□ -0.03
TRA2A-209ENST00000494255 CCDC84Q86UT8 332 aaPredicted RBP14.84□□□□□ -0.03
TRA2A-209ENST00000494255 WBP1LQ9NX94 342 aa14.84□□□□□ -0.03
TRA2A-209ENST00000494255 CTNNA3Q9UI47 895 aa14.84□□□□□ -0.03
TRA2A-209ENST00000494255 AFG3L2Q9Y4W6 797 aa14.84□□□□□ -0.03
TRA2A-209ENST00000494255 PHIPQ8WWQ0 1821 aa14.83□□□□□ -0.04
TRA2A-209ENST00000494255 TRIM75PA6NK02 468 aa14.83□□□□□ -0.04
TRA2A-209ENST00000494255 JAG1P78504 1218 aa14.83□□□□□ -0.04
TRA2A-209ENST00000494255 RAB3GAP1Q15042 981 aa14.83□□□□□ -0.04
TRA2A-209ENST00000494255 SHROOM1Q2M3G4 852 aaPredicted RBP14.83□□□□□ -0.04
TRA2A-209ENST00000494255 KIAA1211Q6ZU35 1233 aa14.83□□□□□ -0.04
TRA2A-209ENST00000494255 ZNF280CQ8ND82 737 aa14.83□□□□□ -0.04
TRA2A-209ENST00000494255 MS4A4AQ96JQ5 239 aa14.83□□□□□ -0.04
TRA2A-209ENST00000494255 IL25Q9H293 177 aa14.83□□□□□ -0.04
TRA2A-209ENST00000494255 ANAPC4Q9UJX5 808 aa14.83□□□□□ -0.04
TRA2A-209ENST00000494255 CA12O43570 354 aa14.82□□□□□ -0.04
TRA2A-209ENST00000494255 CTDSPL2Q05D32 466 aa14.82□□□□□ -0.04
TRA2A-209ENST00000494255 SPP2Q13103 211 aa14.82□□□□□ -0.04
TRA2A-209ENST00000494255 TMEM179Q6ZVK1 233 aa14.82□□□□□ -0.04
TRA2A-209ENST00000494255 ZNF444Q8N0Y2 327 aaPredicted RBP14.82□□□□□ -0.04
TRA2A-209ENST00000494255 ESYT1Q9BSJ8 1104 aa14.82□□□□□ -0.04
TRA2A-209ENST00000494255 WDR18Q9BV38 432 aa14.82□□□□□ -0.04
TRA2A-209ENST00000494255 TESPA1A2RU30 521 aaPredicted RBP14.81□□□□□ -0.04
TRA2A-209ENST00000494255 ALDH1A1P00352 501 aa14.81□□□□□ -0.04
TRA2A-209ENST00000494255 HSPA1AP0DMV8 641 aaKnown RBP14.81□□□□□ -0.04
TRA2A-209ENST00000494255 HSPA1BP0DMV9 641 aaKnown RBP14.81□□□□□ -0.04
TRA2A-209ENST00000494255 AKR1B1P15121 316 aa14.81□□□□□ -0.04
TRA2A-209ENST00000494255 SEPT2Q15019 361 aa14.81□□□□□ -0.04
TRA2A-209ENST00000494255 IFNL1Q8IU54 200 aa14.81□□□□□ -0.04
TRA2A-209ENST00000494255 BRI3BPQ8WY22 251 aa14.81□□□□□ -0.04
TRA2A-209ENST00000494255 ZNF213O14771 459 aa14.81□□□□□ -0.04
TRA2A-209ENST00000494255 PRDM1O75626 825 aa14.81□□□□□ -0.04
TRA2A-209ENST00000494255 RASA1P20936 1047 aa14.81□□□□□ -0.04
TRA2A-209ENST00000494255 HAND2P61296 217 aa14.81□□□□□ -0.04
TRA2A-209ENST00000494255 IMMTQ16891 758 aaKnown RBP14.81□□□□□ -0.04
TRA2A-209ENST00000494255 GADL1Q6ZQY3 521 aa14.81□□□□□ -0.04
TRA2A-209ENST00000494255 FASTKD5Q7L8L6 764 aaKnown RBP14.81□□□□□ -0.04
TRA2A-209ENST00000494255 FEZ1Q99689 392 aa14.81□□□□□ -0.04
TRA2A-209ENST00000494255 A0A0G2JLL6 359 aaPredicted RBP14.8□□□□□ -0.04
TRA2A-209ENST00000494255 USP17L10C9JJH3 530 aa14.8□□□□□ -0.04
TRA2A-209ENST00000494255 GUCY1A2P33402 732 aa14.8□□□□□ -0.04
TRA2A-209ENST00000494255 PRRT2Q7Z6L0 340 aaPredicted RBP14.8□□□□□ -0.04
TRA2A-209ENST00000494255 TOMM22Q9NS69 142 aa14.8□□□□□ -0.04
TRA2A-209ENST00000494255 RNF186Q9NXI6 227 aa14.8□□□□□ -0.04
TRA2A-209ENST00000494255 SAGE1Q9NXZ1 904 aa14.8□□□□□ -0.04
TRA2A-209ENST00000494255 U3KPZ7 1027 aaPredicted RBP14.8□□□□□ -0.04
TRA2A-209ENST00000494255 PTPRFP10586 1907 aa14.8□□□□□ -0.04
TRA2A-209ENST00000494255 LAMA4Q16363 1823 aa14.79□□□□□ -0.04
TRA2A-209ENST00000494255 C19orf81C9J6K1 198 aa14.79□□□□□ -0.04
TRA2A-209ENST00000494255 IGF2BP3O00425 579 aaKnown RBP eCLIP14.79□□□□□ -0.04
TRA2A-209ENST00000494255 TRPA1O75762 1119 aa14.79□□□□□ -0.04
TRA2A-209ENST00000494255 BACE1P56817 501 aa14.79□□□□□ -0.04
TRA2A-209ENST00000494255 PTH1RQ03431 593 aa14.79□□□□□ -0.04
TRA2A-209ENST00000494255 ICA1Q05084 483 aa14.79□□□□□ -0.04
TRA2A-209ENST00000494255 MTMR2Q13614 643 aa14.79□□□□□ -0.04
TRA2A-209ENST00000494255 RNF41Q9H4P4 317 aaPredicted RBP14.79□□□□□ -0.04
TRA2A-209ENST00000494255 ARHGEF10LQ9HCE6 1279 aa14.79□□□□□ -0.04
TRA2A-209ENST00000494255 TMOD4Q9NZQ9 345 aa14.79□□□□□ -0.04
TRA2A-209ENST00000494255 CEP350Q5VT06 3117 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms