RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 SURF6O75683 361 aaKnown RBP14.88□□□□□ -0.03
UPF3A-210ENST00000493727 CAP1Q01518 475 aa14.88□□□□□ -0.03
UPF3A-210ENST00000493727 G3BP1Q13283 466 aaKnown RBP eCLIP14.88□□□□□ -0.03
UPF3A-210ENST00000493727 HSP90AB4PQ58FF6 505 aa14.88□□□□□ -0.03
UPF3A-210ENST00000493727 HABP4Q5JVS0 413 aaKnown RBP14.88□□□□□ -0.03
UPF3A-210ENST00000493727 MFSD14BQ5SR56 506 aa14.88□□□□□ -0.03
UPF3A-210ENST00000493727 RNF19BQ6ZMZ0 732 aa14.88□□□□□ -0.03
UPF3A-210ENST00000493727 VPS37DQ86XT2 251 aa14.88□□□□□ -0.03
UPF3A-210ENST00000493727 SLC10A4Q96EP9 437 aa14.88□□□□□ -0.03
UPF3A-210ENST00000493727 SIL1Q9H173 461 aa14.88□□□□□ -0.03
UPF3A-210ENST00000493727 SERPINA10Q9UK55 444 aa14.88□□□□□ -0.03
UPF3A-210ENST00000493727 PA2G4Q9UQ80 394 aaKnown RBP14.88□□□□□ -0.03
UPF3A-210ENST00000493727 EXOC6BQ9Y2D4 811 aa14.88□□□□□ -0.03
UPF3A-210ENST00000493727 RIPOR2Q9Y4F9 1068 aa14.88□□□□□ -0.03
UPF3A-210ENST00000493727 MYH13Q9UKX3 1938 aa14.88□□□□□ -0.03
UPF3A-210ENST00000493727 APBB1O00213 710 aa14.87□□□□□ -0.03
UPF3A-210ENST00000493727 CAVIN4Q5BKX8 364 aa14.87□□□□□ -0.03
UPF3A-210ENST00000493727 KLHDC4Q8TBB5 520 aa14.87□□□□□ -0.03
UPF3A-210ENST00000493727 ARMC5Q96C12 935 aa14.87□□□□□ -0.03
UPF3A-210ENST00000493727 FAM84BQ96KN1 310 aaPredicted RBP14.87□□□□□ -0.03
UPF3A-210ENST00000493727 PRMT6Q96LA8 375 aaPredicted RBP14.87□□□□□ -0.03
UPF3A-210ENST00000493727 VEZTQ9HBM0 779 aa14.87□□□□□ -0.03
UPF3A-210ENST00000493727 PTPN22Q9Y2R2 807 aa14.87□□□□□ -0.03
UPF3A-210ENST00000493727 CLRN2A0PK11 232 aa14.86□□□□□ -0.03
UPF3A-210ENST00000493727 FMNL1O95466 1100 aaPredicted RBP14.86□□□□□ -0.03
UPF3A-210ENST00000493727 ADH1BP00325 375 aa14.86□□□□□ -0.03
UPF3A-210ENST00000493727 GYG1P46976 350 aa14.86□□□□□ -0.03
UPF3A-210ENST00000493727 IREB2P48200 963 aaKnown RBP14.86□□□□□ -0.03
UPF3A-210ENST00000493727 RFX5P48382 616 aaPredicted RBP14.86□□□□□ -0.03
UPF3A-210ENST00000493727 CRHR2Q13324 411 aa14.86□□□□□ -0.03
UPF3A-210ENST00000493727 Q3C1V9 767 aa14.86□□□□□ -0.03
UPF3A-210ENST00000493727 SH3D19Q5HYK7 790 aa14.86□□□□□ -0.03
UPF3A-210ENST00000493727 METTL24Q5JXM2 366 aa14.86□□□□□ -0.03
UPF3A-210ENST00000493727 TBC1D22AQ8WUA7 517 aa14.86□□□□□ -0.03
UPF3A-210ENST00000493727 ERO1AQ96HE7 468 aa14.86□□□□□ -0.03
UPF3A-210ENST00000493727 PUS3Q9BZE2 481 aaKnown RBP14.86□□□□□ -0.03
UPF3A-210ENST00000493727 BCL11AQ9H165 835 aa14.86□□□□□ -0.03
UPF3A-210ENST00000493727 DCTPP1Q9H773 170 aa14.86□□□□□ -0.03
UPF3A-210ENST00000493727 COPRSQ9NQ92 184 aa14.86□□□□□ -0.03
UPF3A-210ENST00000493727 LIMD1Q9UGP4 676 aa14.86□□□□□ -0.03
UPF3A-210ENST00000493727 TTF2Q9UNY4 1162 aaKnown RBP14.86□□□□□ -0.03
UPF3A-210ENST00000493727 RAB11FIP3O75154 756 aa14.85□□□□□ -0.03
UPF3A-210ENST00000493727 NBPF12Q5TAG4 269 aaPredicted RBP14.85□□□□□ -0.03
UPF3A-210ENST00000493727 FBXO33Q7Z6M2 555 aa14.85□□□□□ -0.03
UPF3A-210ENST00000493727 ERC1Q8IUD2 1116 aa14.85□□□□□ -0.03
UPF3A-210ENST00000493727 CD99L2Q8TCZ2 262 aa14.85□□□□□ -0.03
UPF3A-210ENST00000493727 SPSB2Q99619 263 aa14.85□□□□□ -0.03
UPF3A-210ENST00000493727 PTPN18Q99952 460 aa14.85□□□□□ -0.03
UPF3A-210ENST00000493727 JAG2Q9Y219 1238 aa14.85□□□□□ -0.03
UPF3A-210ENST00000493727 FRAT2O75474 233 aaPredicted RBP14.84□□□□□ -0.03
UPF3A-210ENST00000493727 USP2O75604 605 aaPredicted RBP14.84□□□□□ -0.03
UPF3A-210ENST00000493727 PDE8BO95263 885 aa14.84□□□□□ -0.03
UPF3A-210ENST00000493727 HDLBPQ00341 1268 aaKnown RBP14.84□□□□□ -0.03
UPF3A-210ENST00000493727 RASA3Q14644 834 aa14.84□□□□□ -0.03
UPF3A-210ENST00000493727 ANKRD45Q5TZF3 282 aa14.84□□□□□ -0.03
UPF3A-210ENST00000493727 SMC5Q8IY18 1101 aa14.84□□□□□ -0.03
UPF3A-210ENST00000493727 NOP58Q9Y2X3 529 aaKnown RBP14.84□□□□□ -0.03
UPF3A-210ENST00000493727 ZSWIM8A7E2V4 1837 aa14.83□□□□□ -0.04
UPF3A-210ENST00000493727 EYA2O00167 538 aa14.83□□□□□ -0.04
UPF3A-210ENST00000493727 IFIT1P09914 478 aaKnown RBP14.83□□□□□ -0.04
UPF3A-210ENST00000493727 IL15P40933 162 aaPredicted RBP14.83□□□□□ -0.04
UPF3A-210ENST00000493727 CRKP46108 304 aa14.83□□□□□ -0.04
UPF3A-210ENST00000493727 TNNI2P48788 182 aa14.83□□□□□ -0.04
UPF3A-210ENST00000493727 SKIV2LQ15477 1246 aaKnown RBP14.83□□□□□ -0.04
UPF3A-210ENST00000493727 TUSC1Q2TAM9 212 aa14.83□□□□□ -0.04
UPF3A-210ENST00000493727 LRRC24Q50LG9 513 aa14.83□□□□□ -0.04
UPF3A-210ENST00000493727 OTUD7BQ6GQQ9 843 aa14.83□□□□□ -0.04
UPF3A-210ENST00000493727 ANKRD13AQ8IZ07 590 aa14.83□□□□□ -0.04
UPF3A-210ENST00000493727 ZNF70Q9UC06 446 aaPredicted RBP14.83□□□□□ -0.04
UPF3A-210ENST00000493727 SUGT1Q9Y2Z0 365 aa14.83□□□□□ -0.04
UPF3A-210ENST00000493727 MAST3O60307 1309 aa14.83□□□□□ -0.04
UPF3A-210ENST00000493727 CIAO1O76071 339 aa14.82□□□□□ -0.04
UPF3A-210ENST00000493727 CLK2P49760 499 aaKnown RBP14.82□□□□□ -0.04
UPF3A-210ENST00000493727 SP3Q02447 781 aa14.82□□□□□ -0.04
UPF3A-210ENST00000493727 PUM3Q15397 648 aaKnown RBP14.82□□□□□ -0.04
UPF3A-210ENST00000493727 FAM160A2Q8N612 972 aaPredicted RBP14.82□□□□□ -0.04
UPF3A-210ENST00000493727 VGLL2Q8N8G2 317 aa14.82□□□□□ -0.04
UPF3A-210ENST00000493727 SYMPKQ92797 1274 aaKnown RBP14.82□□□□□ -0.04
UPF3A-210ENST00000493727 KIF1BPQ96EK5 621 aa14.82□□□□□ -0.04
UPF3A-210ENST00000493727 ZNF333Q96JL9 665 aa14.82□□□□□ -0.04
UPF3A-210ENST00000493727 LRRCC1Q9C099 1032 aa14.82□□□□□ -0.04
UPF3A-210ENST00000493727 TDRD3Q9H7E2 651 aaKnown RBP14.82□□□□□ -0.04
UPF3A-210ENST00000493727 EFCC1Q9HA90 598 aa14.82□□□□□ -0.04
UPF3A-210ENST00000493727 POLR3EQ9NVU0 708 aa14.82□□□□□ -0.04
UPF3A-210ENST00000493727 EN2P19622 333 aaPredicted RBP14.81□□□□□ -0.04
UPF3A-210ENST00000493727 FXR1P51114 621 aaKnown RBP eCLIP14.81□□□□□ -0.04
UPF3A-210ENST00000493727 TEKT1Q969V4 418 aa14.81□□□□□ -0.04
UPF3A-210ENST00000493727 TEPSINQ96N21 525 aa14.81□□□□□ -0.04
UPF3A-210ENST00000493727 MRIQ9BWK5 157 aa14.81□□□□□ -0.04
UPF3A-210ENST00000493727 TMOD2Q9NZR1 351 aa14.81□□□□□ -0.04
UPF3A-210ENST00000493727 SMARCA5O60264 1052 aaPredicted RBP14.8□□□□□ -0.04
UPF3A-210ENST00000493727 SLC5A1P13866 664 aa14.8□□□□□ -0.04
UPF3A-210ENST00000493727 CHAF1AQ13111 956 aaPredicted RBP14.8□□□□□ -0.04
UPF3A-210ENST00000493727 RHPN1Q8TCX5 695 aa14.8□□□□□ -0.04
UPF3A-210ENST00000493727 OPTNQ96CV9 577 aa14.8□□□□□ -0.04
UPF3A-210ENST00000493727 HOOK2Q96ED9 719 aa14.8□□□□□ -0.04
UPF3A-210ENST00000493727 LNPKQ9C0E8 428 aa14.8□□□□□ -0.04
UPF3A-210ENST00000493727 GOPCQ9HD26 462 aa14.8□□□□□ -0.04
UPF3A-210ENST00000493727 CEP126Q9P2H0 1117 aa14.8□□□□□ -0.04
UPF3A-210ENST00000493727 LAMA3Q16787 3333 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms