RNA–Protein interactions for RNA: ENST00000493486.1

LCOR-208, Transcript of ligand dependent nuclear receptor corepressor, human

TSL 3

Gene LCOR, Length 245 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LCOR-208	ENST00000493486	TMPO	P42166	694 aa	Known RBP	4.59	□□□□□ -1.67
LCOR-208	ENST00000493486	TGFB2	P61812	414 aa		4.59	□□□□□ -1.67
LCOR-208	ENST00000493486	RAC1	P63000	192 aa		4.59	□□□□□ -1.67
LCOR-208	ENST00000493486	NRG1	Q02297	640 aa	Predicted RBP	4.59	□□□□□ -1.67
LCOR-208	ENST00000493486	NCOA4	Q13772	614 aa		4.59	□□□□□ -1.67
LCOR-208	ENST00000493486	RALBP1	Q15311	655 aa		4.59	□□□□□ -1.67
LCOR-208	ENST00000493486	TAF7	Q15545	349 aa	Predicted RBP	4.59	□□□□□ -1.67
LCOR-208	ENST00000493486	WASHC4	Q2M389	1173 aa		4.59	□□□□□ -1.67
LCOR-208	ENST00000493486	ANKRD36C	Q5JPF3	1778 aa		4.59	□□□□□ -1.67
LCOR-208	ENST00000493486	UBN2	Q6ZU65	1347 aa		4.59	□□□□□ -1.67
LCOR-208	ENST00000493486	KRTAP19-1	Q8IUB9	90 aa		4.59	□□□□□ -1.67
LCOR-208	ENST00000493486	DMRTC2	Q8IXT2	367 aa	Predicted RBP	4.59	□□□□□ -1.67
LCOR-208	ENST00000493486	TTC5	Q8N0Z6	440 aa		4.59	□□□□□ -1.67
LCOR-208	ENST00000493486	SNED1	Q8TER0	1413 aa		4.59	□□□□□ -1.67
LCOR-208	ENST00000493486	ZNF428	Q96B54	188 aa		4.59	□□□□□ -1.67
LCOR-208	ENST00000493486	LENG1	Q96BZ8	264 aa	Predicted RBP	4.59	□□□□□ -1.67
LCOR-208	ENST00000493486	ABCC12	Q96J65	1359 aa		4.59	□□□□□ -1.67
LCOR-208	ENST00000493486	SLC6A14	Q9UN76	642 aa		4.59	□□□□□ -1.67
LCOR-208	ENST00000493486	NUDC	Q9Y266	331 aa		4.59	□□□□□ -1.67
LCOR-208	ENST00000493486	BCS1L	Q9Y276	419 aa		4.59	□□□□□ -1.67
LCOR-208	ENST00000493486	NFKBIE	O00221	500 aa		4.58	□□□□□ -1.68
LCOR-208	ENST00000493486	STARD3NL	O95772	234 aa		4.58	□□□□□ -1.68
LCOR-208	ENST00000493486	SNRPA1	P09661	255 aa	Known RBP	4.58	□□□□□ -1.68
LCOR-208	ENST00000493486	RIPK4	P57078	832 aa		4.58	□□□□□ -1.68
LCOR-208	ENST00000493486	TYRO3	Q06418	890 aa		4.58	□□□□□ -1.68
LCOR-208	ENST00000493486	ZNF526	Q8TF50	670 aa	Predicted RBP	4.58	□□□□□ -1.68
LCOR-208	ENST00000493486	SUSD3	Q96L08	255 aa		4.58	□□□□□ -1.68
LCOR-208	ENST00000493486	PHACTR1	Q9C0D0	580 aa		4.58	□□□□□ -1.68
LCOR-208	ENST00000493486	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	4.58	□□□□□ -1.68
LCOR-208	ENST00000493486	GPC6	Q9Y625	555 aa	Predicted RBP	4.58	□□□□□ -1.68
LCOR-208	ENST00000493486	DICER1	Q9UPY3	1922 aa	Known RBP	4.58	□□□□□ -1.68
LCOR-208	ENST00000493486	DDX60	Q8IY21	1712 aa	Known RBP	4.58	□□□□□ -1.68
LCOR-208	ENST00000493486	CHL1	O00533	1208 aa		4.57	□□□□□ -1.68
LCOR-208	ENST00000493486	GRIN3B	O60391	1043 aa		4.57	□□□□□ -1.68
LCOR-208	ENST00000493486	ZNF853	P0CG23	659 aa		4.57	□□□□□ -1.68
LCOR-208	ENST00000493486	SOX11	P35716	441 aa		4.57	□□□□□ -1.68
LCOR-208	ENST00000493486	AFF1	P51825	1210 aa	Known RBP	4.57	□□□□□ -1.68
LCOR-208	ENST00000493486	C1QTNF8	P60827	252 aa		4.57	□□□□□ -1.68
LCOR-208	ENST00000493486	PSAPL1	Q6NUJ1	521 aa		4.57	□□□□□ -1.68
LCOR-208	ENST00000493486	ARHGAP27	Q6ZUM4	889 aa		4.57	□□□□□ -1.68
LCOR-208	ENST00000493486	SYNE4	Q8N205	404 aa		4.57	□□□□□ -1.68
LCOR-208	ENST00000493486	NGEF	Q8N5V2	710 aa		4.57	□□□□□ -1.68
LCOR-208	ENST00000493486	TPCN2	Q8NHX9	752 aa		4.57	□□□□□ -1.68
LCOR-208	ENST00000493486	RTF1	Q92541	710 aa	Known RBP	4.57	□□□□□ -1.68
LCOR-208	ENST00000493486	SSBP4	Q9BWG4	385 aa	Predicted RBP	4.57	□□□□□ -1.68
LCOR-208	ENST00000493486	NMRK2	Q9NPI5	230 aa		4.57	□□□□□ -1.68
LCOR-208	ENST00000493486	ANKIB1	Q9P2G1	1089 aa		4.57	□□□□□ -1.68
LCOR-208	ENST00000493486	NAGPA	Q9UK23	515 aa		4.57	□□□□□ -1.68
LCOR-208	ENST00000493486	KIAA1024	Q9UPX6	916 aa		4.57	□□□□□ -1.68
LCOR-208	ENST00000493486	LTBP1	Q14766	1721 aa		4.56	□□□□□ -1.68
LCOR-208	ENST00000493486	KLRG2	A4D1S0	409 aa	Predicted RBP	4.56	□□□□□ -1.68
LCOR-208	ENST00000493486	FAM177B	A6PVY3	158 aa		4.56	□□□□□ -1.68
LCOR-208	ENST00000493486	USP17L5	A8MUK1	530 aa		4.56	□□□□□ -1.68
LCOR-208	ENST00000493486	APAF1	O14727	1248 aa		4.56	□□□□□ -1.68
LCOR-208	ENST00000493486	SRGN	P10124	158 aa		4.56	□□□□□ -1.68
LCOR-208	ENST00000493486	MYL6B	P14649	208 aa		4.56	□□□□□ -1.68
LCOR-208	ENST00000493486	PSMA6	P60900	246 aa	Known RBP	4.56	□□□□□ -1.68
LCOR-208	ENST00000493486	DALRD3	Q5D0E6	543 aa	Known RBP	4.56	□□□□□ -1.68
LCOR-208	ENST00000493486	C1orf53	Q5VUE5	145 aa		4.56	□□□□□ -1.68
LCOR-208	ENST00000493486	SUSD4	Q5VX71	490 aa		4.56	□□□□□ -1.68
LCOR-208	ENST00000493486	C9orf131	Q5VYM1	1079 aa		4.56	□□□□□ -1.68
LCOR-208	ENST00000493486	C2CD5	Q86YS7	1000 aa		4.56	□□□□□ -1.68
LCOR-208	ENST00000493486	FMR1NB	Q8N0W7	255 aa	Predicted RBP	4.56	□□□□□ -1.68
LCOR-208	ENST00000493486	C8orf58	Q8NAV2	365 aa		4.56	□□□□□ -1.68
LCOR-208	ENST00000493486	PNISR	Q8TF01	805 aa	Known RBP	4.56	□□□□□ -1.68
LCOR-208	ENST00000493486	RUNDC1	Q96C34	613 aa		4.56	□□□□□ -1.68
LCOR-208	ENST00000493486	BRIP1	Q9BX63	1249 aa		4.56	□□□□□ -1.68
LCOR-208	ENST00000493486	TEX13A	Q9BXU3	409 aa	Predicted RBP	4.56	□□□□□ -1.68
LCOR-208	ENST00000493486	DNAJB12	Q9NXW2	375 aa	Known RBP	4.56	□□□□□ -1.68
LCOR-208	ENST00000493486	PIM2	Q9P1W9	311 aa		4.56	□□□□□ -1.68
LCOR-208	ENST00000493486	MAP3K15	Q6ZN16	1313 aa		4.55	□□□□□ -1.68
LCOR-208	ENST00000493486	MAPK8IP3	Q9UPT6	1336 aa		4.55	□□□□□ -1.68
LCOR-208	ENST00000493486		A0A087WZG4	1122 aa		4.55	□□□□□ -1.68
LCOR-208	ENST00000493486	C21orf2	O43822	256 aa		4.55	□□□□□ -1.68
LCOR-208	ENST00000493486	RGS9	O75916	674 aa	Predicted RBP	4.55	□□□□□ -1.68
LCOR-208	ENST00000493486	NTSR2	O95665	410 aa		4.55	□□□□□ -1.68
LCOR-208	ENST00000493486	EIF2S2	P20042	333 aa	Known RBP	4.55	□□□□□ -1.68
LCOR-208	ENST00000493486	GPT	P24298	496 aa		4.55	□□□□□ -1.68
LCOR-208	ENST00000493486	IREB2	P48200	963 aa	Known RBP	4.55	□□□□□ -1.68
LCOR-208	ENST00000493486	CCDC102B	Q68D86	513 aa		4.55	□□□□□ -1.68
LCOR-208	ENST00000493486	ZNF34	Q8IZ26	560 aa		4.55	□□□□□ -1.68
LCOR-208	ENST00000493486	TSPYL6	Q8N831	410 aa		4.55	□□□□□ -1.68
LCOR-208	ENST00000493486	ALG2	Q9H553	416 aa		4.55	□□□□□ -1.68
LCOR-208	ENST00000493486	GOLGA2P5	Q9HBQ8	144 aa		4.55	□□□□□ -1.68
LCOR-208	ENST00000493486	TSPYL4	Q9UJ04	414 aa		4.55	□□□□□ -1.68
LCOR-208	ENST00000493486	NIP7	Q9Y221	180 aa	Known RBP eCLIP	4.55	□□□□□ -1.68
LCOR-208	ENST00000493486	DUOX1	Q9NRD9	1551 aa		4.55	□□□□□ -1.68
LCOR-208	ENST00000493486	ZBTB7B	O15156	539 aa	Predicted RBP	4.54	□□□□□ -1.68
LCOR-208	ENST00000493486	LZTS3	O60299	673 aa	Predicted RBP	4.54	□□□□□ -1.68
LCOR-208	ENST00000493486	CPB1	P15086	417 aa		4.54	□□□□□ -1.68
LCOR-208	ENST00000493486	NFKB1	P19838	968 aa		4.54	□□□□□ -1.68
LCOR-208	ENST00000493486	HMGB2	P26583	209 aa	Known RBP	4.54	□□□□□ -1.68
LCOR-208	ENST00000493486	NOS3	P29474	1203 aa		4.54	□□□□□ -1.68
LCOR-208	ENST00000493486	CLDN10	P78369	228 aa		4.54	□□□□□ -1.68
LCOR-208	ENST00000493486	HTRA3	P83110	453 aa		4.54	□□□□□ -1.68
LCOR-208	ENST00000493486	CRY2	Q49AN0	593 aa		4.54	□□□□□ -1.68
LCOR-208	ENST00000493486	PRPF40B	Q6NWY9	871 aa	Known RBP	4.54	□□□□□ -1.68
LCOR-208	ENST00000493486	CLEC4G	Q6UXB4	293 aa		4.54	□□□□□ -1.68
LCOR-208	ENST00000493486	COPS6	Q7L5N1	327 aa		4.54	□□□□□ -1.68
LCOR-208	ENST00000493486	BTLA	Q7Z6A9	289 aa		4.54	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms