RNA–Protein interactions for RNA: ENST00000491060.1

TRAIP-211, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-211ENST00000491060 ADGRA2Q96PE1 1338 aa16.45■□□□□ 0.22
TRAIP-211ENST00000491060 DDX60LQ5H9U9 1706 aaKnown RBP16.45■□□□□ 0.22
TRAIP-211ENST00000491060 CYP2D7A0A087X1C5 515 aa16.45■□□□□ 0.22
TRAIP-211ENST00000491060 TCRBV5S4A2TA0A5A2 114 aa16.45■□□□□ 0.22
TRAIP-211ENST00000491060 POTEFA5A3E0 1075 aa16.45■□□□□ 0.22
TRAIP-211ENST00000491060 SMIM22K7EJ46 135 aa16.45■□□□□ 0.22
TRAIP-211ENST00000491060 ADD2P35612 726 aa16.45■□□□□ 0.22
TRAIP-211ENST00000491060 SLC9C1Q4G0N8 1177 aa16.45■□□□□ 0.22
TRAIP-211ENST00000491060 FOXP4Q8IVH2 680 aaPredicted RBP16.45■□□□□ 0.22
TRAIP-211ENST00000491060 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.45■□□□□ 0.22
TRAIP-211ENST00000491060 DYNLL2Q96FJ2 89 aa16.45■□□□□ 0.22
TRAIP-211ENST00000491060 TRIM47Q96LD4 638 aa16.45■□□□□ 0.22
TRAIP-211ENST00000491060 OSBPP22059 807 aa16.44■□□□□ 0.22
TRAIP-211ENST00000491060 ARHGEF6Q15052 776 aa16.44■□□□□ 0.22
TRAIP-211ENST00000491060 SLC44A5Q8NCS7 719 aa16.44■□□□□ 0.22
TRAIP-211ENST00000491060 FEZ1Q99689 392 aa16.44■□□□□ 0.22
TRAIP-211ENST00000491060 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.44■□□□□ 0.22
TRAIP-211ENST00000491060 ZCCHC17Q9NP64 241 aaKnown RBP16.44■□□□□ 0.22
TRAIP-211ENST00000491060 ECHDC1Q9NTX5 307 aa16.44■□□□□ 0.22
TRAIP-211ENST00000491060 TMOD4Q9NZQ9 345 aa16.44■□□□□ 0.22
TRAIP-211ENST00000491060 AGTPBP1Q9UPW5 1226 aa16.44■□□□□ 0.22
TRAIP-211ENST00000491060 MYPNQ86TC9 1320 aa16.44■□□□□ 0.22
TRAIP-211ENST00000491060 DOCK3Q8IZD9 2030 aa16.43■□□□□ 0.22
TRAIP-211ENST00000491060 TTC6Q86TZ1 520 aa16.43■□□□□ 0.22
TRAIP-211ENST00000491060 RAET1EQ8TD07 263 aa16.43■□□□□ 0.22
TRAIP-211ENST00000491060 GPATCH3Q96I76 525 aa16.43■□□□□ 0.22
TRAIP-211ENST00000491060 BIN2Q9UBW5 565 aaPredicted RBP16.43■□□□□ 0.22
TRAIP-211ENST00000491060 SERPINB13Q9UIV8 391 aa16.43■□□□□ 0.22
TRAIP-211ENST00000491060 GABRQQ9UN88 632 aa16.43■□□□□ 0.22
TRAIP-211ENST00000491060 SLC4A4Q9Y6R1 1079 aa16.43■□□□□ 0.22
TRAIP-211ENST00000491060 ASNSP08243 561 aa16.42■□□□□ 0.22
TRAIP-211ENST00000491060 IRX6P78412 446 aaPredicted RBP16.42■□□□□ 0.22
TRAIP-211ENST00000491060 PRKCZQ05513 592 aa16.42■□□□□ 0.22
TRAIP-211ENST00000491060 ABCB5Q2M3G0 1257 aa16.42■□□□□ 0.22
TRAIP-211ENST00000491060 CERKLQ49MI3 558 aaPredicted RBP16.42■□□□□ 0.22
TRAIP-211ENST00000491060 ANKRD45Q5TZF3 282 aa16.42■□□□□ 0.22
TRAIP-211ENST00000491060 SAMD1Q6SPF0 538 aaPredicted RBP16.42■□□□□ 0.22
TRAIP-211ENST00000491060 CLEC10AQ8IUN9 316 aa16.42■□□□□ 0.22
TRAIP-211ENST00000491060 PUS7LQ9H0K6 701 aaKnown RBP16.42■□□□□ 0.22
TRAIP-211ENST00000491060 ZBTB47Q9UFB7 747 aaPredicted RBP16.42■□□□□ 0.22
TRAIP-211ENST00000491060 BCRP11274 1271 aa16.41■□□□□ 0.22
TRAIP-211ENST00000491060 EN2P19622 333 aaPredicted RBP16.41■□□□□ 0.22
TRAIP-211ENST00000491060 SHMT1P34896 483 aa16.41■□□□□ 0.22
TRAIP-211ENST00000491060 RGS19P49795 217 aa16.41■□□□□ 0.22
TRAIP-211ENST00000491060 FCGRTP55899 365 aa16.41■□□□□ 0.22
TRAIP-211ENST00000491060 IRX3P78415 501 aaPredicted RBP16.41■□□□□ 0.22
TRAIP-211ENST00000491060 ACER1Q8TDN7 264 aa16.41■□□□□ 0.22
TRAIP-211ENST00000491060 PAGR1Q9BTK6 254 aa16.41■□□□□ 0.22
TRAIP-211ENST00000491060 ASCC2Q9H1I8 757 aaPredicted RBP16.41■□□□□ 0.22
TRAIP-211ENST00000491060 DCP1AQ9NPI6 582 aaPredicted RBP16.41■□□□□ 0.22
TRAIP-211ENST00000491060 TNPO2O14787 897 aaKnown RBP16.4■□□□□ 0.22
TRAIP-211ENST00000491060 BACE1P56817 501 aa16.4■□□□□ 0.22
TRAIP-211ENST00000491060 SEPT2Q15019 361 aa16.4■□□□□ 0.22
TRAIP-211ENST00000491060 B4GALNT3Q6L9W6 998 aa16.4■□□□□ 0.22
TRAIP-211ENST00000491060 TMEM106CQ9BVX2 250 aa16.4■□□□□ 0.22
TRAIP-211ENST00000491060 CABP5Q9NP86 173 aa16.4■□□□□ 0.22
TRAIP-211ENST00000491060 SRRDQ9UH36 339 aa16.4■□□□□ 0.22
TRAIP-211ENST00000491060 PNMA3Q9UL41 463 aa16.4■□□□□ 0.22
TRAIP-211ENST00000491060 USP17L10C9JJH3 530 aa16.39■□□□□ 0.21
TRAIP-211ENST00000491060 ELNP15502 786 aa16.39■□□□□ 0.21
TRAIP-211ENST00000491060 ATP2B2Q01814 1243 aa16.39■□□□□ 0.21
TRAIP-211ENST00000491060 MTFR1Q15390 333 aa16.39■□□□□ 0.21
TRAIP-211ENST00000491060 CERS3Q8IU89 383 aa16.39■□□□□ 0.21
TRAIP-211ENST00000491060 PROCA1Q8NCQ7 364 aaPredicted RBP16.39■□□□□ 0.21
TRAIP-211ENST00000491060 EXOC6Q8TAG9 804 aa16.39■□□□□ 0.21
TRAIP-211ENST00000491060 P2RX7Q99572 595 aaKnown RBP16.39■□□□□ 0.21
TRAIP-211ENST00000491060 EMILIN3Q9NT22 766 aa16.39■□□□□ 0.21
TRAIP-211ENST00000491060 M0R2C6 588 aa16.38■□□□□ 0.21
TRAIP-211ENST00000491060 RAD21O60216 631 aa16.38■□□□□ 0.21
TRAIP-211ENST00000491060 ZSCAN25Q6NSZ9 544 aa16.38■□□□□ 0.21
TRAIP-211ENST00000491060 TATDN1Q6P1N9 297 aa16.38■□□□□ 0.21
TRAIP-211ENST00000491060 NBPF11Q86T75 865 aa16.38■□□□□ 0.21
TRAIP-211ENST00000491060 METTL16Q86W50 562 aaKnown RBP16.38■□□□□ 0.21
TRAIP-211ENST00000491060 ZNF333Q96JL9 665 aa16.38■□□□□ 0.21
TRAIP-211ENST00000491060 FSD1Q9BTV5 496 aa16.38■□□□□ 0.21
TRAIP-211ENST00000491060 WDR18Q9BV38 432 aa16.38■□□□□ 0.21
TRAIP-211ENST00000491060 MINDY4BA8MYZ0 360 aa16.37■□□□□ 0.21
TRAIP-211ENST00000491060 USP17L12C9JPN9 530 aa16.37■□□□□ 0.21
TRAIP-211ENST00000491060 USP17L21D6R901 530 aa16.37■□□□□ 0.21
TRAIP-211ENST00000491060 AKR1B1P15121 316 aa16.37■□□□□ 0.21
TRAIP-211ENST00000491060 HOXD10P28358 340 aa16.37■□□□□ 0.21
TRAIP-211ENST00000491060 PABPC4Q13310 644 aaKnown RBP eCLIP16.37■□□□□ 0.21
TRAIP-211ENST00000491060 USP17L2Q6R6M4 530 aa16.37■□□□□ 0.21
TRAIP-211ENST00000491060 ARMC5Q96C12 935 aa16.37■□□□□ 0.21
TRAIP-211ENST00000491060 SEC62Q99442 399 aaKnown RBP16.37■□□□□ 0.21
TRAIP-211ENST00000491060 EHD4Q9H223 541 aa16.37■□□□□ 0.21
TRAIP-211ENST00000491060 SLC45A1Q9Y2W3 748 aa16.37■□□□□ 0.21
TRAIP-211ENST00000491060 KIAA0100Q14667 2235 aaKnown RBP16.37■□□□□ 0.21
TRAIP-211ENST00000491060 RNF113AO15541 343 aaKnown RBP16.36■□□□□ 0.21
TRAIP-211ENST00000491060 IGSF3O75054 1194 aa16.36■□□□□ 0.21
TRAIP-211ENST00000491060 APPP05067 770 aa16.36■□□□□ 0.21
TRAIP-211ENST00000491060 MX1P20591 662 aa16.36■□□□□ 0.21
TRAIP-211ENST00000491060 GRK4P32298 578 aa16.36■□□□□ 0.21
TRAIP-211ENST00000491060 GUCY1A2P33402 732 aa16.36■□□□□ 0.21
TRAIP-211ENST00000491060 FLT3LGP49771 235 aa16.36■□□□□ 0.21
TRAIP-211ENST00000491060 UBE3CQ15386 1083 aa16.36■□□□□ 0.21
TRAIP-211ENST00000491060 SH3D19Q5HYK7 790 aa16.36■□□□□ 0.21
TRAIP-211ENST00000491060 AMOTL1Q8IY63 956 aa16.36■□□□□ 0.21
TRAIP-211ENST00000491060 KBTBD3Q8NAB2 608 aa16.36■□□□□ 0.21
TRAIP-211ENST00000491060 OSBP2Q969R2 916 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms