RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 RGPD2P0DJD1 1756 aa11.55□□□□□ -0.56
BRD9-209ENST00000490814 KDM6AO15550 1401 aaPredicted RBP11.55□□□□□ -0.56
BRD9-209ENST00000490814 CBFA2T2O43439 604 aa11.54□□□□□ -0.56
BRD9-209ENST00000490814 NEBLO76041 1014 aa11.54□□□□□ -0.56
BRD9-209ENST00000490814 CMA1P23946 247 aa11.54□□□□□ -0.56
BRD9-209ENST00000490814 TMEM67Q5HYA8 995 aa11.54□□□□□ -0.56
BRD9-209ENST00000490814 CCDC102BQ68D86 513 aa11.54□□□□□ -0.56
BRD9-209ENST00000490814 BICDL1Q6ZP65 573 aa11.54□□□□□ -0.56
BRD9-209ENST00000490814 GPR161Q8N6U8 529 aaKnown RBP11.54□□□□□ -0.56
BRD9-209ENST00000490814 NUP133Q8WUM0 1156 aa11.54□□□□□ -0.56
BRD9-209ENST00000490814 APPBP2Q92624 585 aa11.54□□□□□ -0.56
BRD9-209ENST00000490814 SENP2Q9HC62 589 aa11.54□□□□□ -0.56
BRD9-209ENST00000490814 FOXN1O15353 648 aa11.54□□□□□ -0.56
BRD9-209ENST00000490814 ADKP55263 362 aaKnown RBP11.54□□□□□ -0.56
BRD9-209ENST00000490814 CCDC102AQ96A19 550 aa11.54□□□□□ -0.56
BRD9-209ENST00000490814 EXOC4Q96A65 974 aa11.54□□□□□ -0.56
BRD9-209ENST00000490814 WDR24Q96S15 920 aa11.54□□□□□ -0.56
BRD9-209ENST00000490814 NBPF3Q9H094 633 aa11.54□□□□□ -0.56
BRD9-209ENST00000490814 HPS5Q9UPZ3 1129 aa11.54□□□□□ -0.56
BRD9-209ENST00000490814 PARP3Q9Y6F1 533 aa11.54□□□□□ -0.56
BRD9-209ENST00000490814 MEGF6O75095 1541 aa11.54□□□□□ -0.56
BRD9-209ENST00000490814 ZBTB43O43298 467 aa11.54□□□□□ -0.56
BRD9-209ENST00000490814 CASP7P55210 303 aa11.54□□□□□ -0.56
BRD9-209ENST00000490814 CORO7P57737 925 aa11.54□□□□□ -0.56
BRD9-209ENST00000490814 ANTXR2P58335 489 aa11.54□□□□□ -0.56
BRD9-209ENST00000490814 NAIF1Q69YI7 327 aaPredicted RBP11.54□□□□□ -0.56
BRD9-209ENST00000490814 TRIM65Q6PJ69 517 aa11.54□□□□□ -0.56
BRD9-209ENST00000490814 FAM196AQ6ZSG2 479 aa11.54□□□□□ -0.56
BRD9-209ENST00000490814 DESI2Q9BSY9 194 aa11.54□□□□□ -0.56
BRD9-209ENST00000490814 ANGEL1Q9UNK9 670 aaKnown RBP11.54□□□□□ -0.56
BRD9-209ENST00000490814 PPP2R2CQ9Y2T4 447 aa11.54□□□□□ -0.56
BRD9-209ENST00000490814 SALL1Q9NSC2 1324 aa11.53□□□□□ -0.56
BRD9-209ENST00000490814 AHDC1Q5TGY3 1603 aaPredicted RBP11.53□□□□□ -0.56
BRD9-209ENST00000490814 IFIT3O14879 490 aaKnown RBP11.53□□□□□ -0.56
BRD9-209ENST00000490814 SAFBQ15424 915 aaKnown RBP eCLIP11.53□□□□□ -0.56
BRD9-209ENST00000490814 LONRF2Q1L5Z9 754 aa11.53□□□□□ -0.56
BRD9-209ENST00000490814 AIDAQ96BJ3 306 aa11.53□□□□□ -0.56
BRD9-209ENST00000490814 PDE11AQ9HCR9 933 aa11.53□□□□□ -0.56
BRD9-209ENST00000490814 KCNH3Q9ULD8 1083 aa11.53□□□□□ -0.56
BRD9-209ENST00000490814 KCNJ14Q9UNX9 436 aa11.53□□□□□ -0.56
BRD9-209ENST00000490814 PCDHA5Q9Y5H7 936 aa11.53□□□□□ -0.56
BRD9-209ENST00000490814 NFAT5O94916 1531 aa11.53□□□□□ -0.56
BRD9-209ENST00000490814 PALLDQ8WX93 1383 aa11.53□□□□□ -0.56
BRD9-209ENST00000490814 CDKL5O76039 1030 aa11.53□□□□□ -0.56
BRD9-209ENST00000490814 DHX8Q14562 1220 aaKnown RBP11.53□□□□□ -0.56
BRD9-209ENST00000490814 SLC39A14Q15043 492 aa11.53□□□□□ -0.56
BRD9-209ENST00000490814 LONRF3Q496Y0 759 aa11.53□□□□□ -0.56
BRD9-209ENST00000490814 GRAMD1CQ8IYS0 662 aa11.53□□□□□ -0.56
BRD9-209ENST00000490814 GOLGA1Q92805 767 aa11.53□□□□□ -0.56
BRD9-209ENST00000490814 PRDM16Q9HAZ2 1276 aa11.53□□□□□ -0.56
BRD9-209ENST00000490814 SLC24A3Q9HC58 644 aa11.53□□□□□ -0.56
BRD9-209ENST00000490814 THRAP3Q9Y2W1 955 aaKnown RBP11.53□□□□□ -0.56
BRD9-209ENST00000490814 ZFYP08048 801 aaPredicted RBP11.52□□□□□ -0.56
BRD9-209ENST00000490814 ZC3H12AQ5D1E8 599 aaKnown RBP11.52□□□□□ -0.56
BRD9-209ENST00000490814 JAKMIP3Q5VZ66 844 aa11.52□□□□□ -0.56
BRD9-209ENST00000490814 REXO1L1PQ8IX06 675 aa11.52□□□□□ -0.56
BRD9-209ENST00000490814 MB21D2Q8IYB1 491 aaPredicted RBP11.52□□□□□ -0.56
BRD9-209ENST00000490814 CDCA7Q9BWT1 371 aaPredicted RBP11.52□□□□□ -0.56
BRD9-209ENST00000490814 AGXT2Q9BYV1 514 aa11.52□□□□□ -0.56
BRD9-209ENST00000490814 KCND1Q9NSA2 647 aa11.52□□□□□ -0.56
BRD9-209ENST00000490814 PSD3Q9NYI0 1048 aa11.52□□□□□ -0.56
BRD9-209ENST00000490814 ATP8B1O43520 1251 aa11.52□□□□□ -0.57
BRD9-209ENST00000490814 USP8P40818 1118 aa11.52□□□□□ -0.57
BRD9-209ENST00000490814 NCAPHQ15003 741 aa11.52□□□□□ -0.57
BRD9-209ENST00000490814 SHC4Q6S5L8 630 aa11.52□□□□□ -0.57
BRD9-209ENST00000490814 LRP10Q7Z4F1 713 aa11.52□□□□□ -0.57
BRD9-209ENST00000490814 DHX58Q96C10 678 aa11.52□□□□□ -0.57
BRD9-209ENST00000490814 MPHOSPH8Q99549 860 aa11.52□□□□□ -0.57
BRD9-209ENST00000490814 LZTFL1Q9NQ48 299 aa11.52□□□□□ -0.57
BRD9-209ENST00000490814 CCNL1Q9UK58 526 aaPredicted RBP11.52□□□□□ -0.57
BRD9-209ENST00000490814 TBC1D2BQ9UPU7 963 aa11.52□□□□□ -0.57
BRD9-209ENST00000490814 SLC12A7Q9Y666 1083 aa11.52□□□□□ -0.57
BRD9-209ENST00000490814 CPP00450 1065 aa11.52□□□□□ -0.57
BRD9-209ENST00000490814 STX17P56962 302 aa11.52□□□□□ -0.57
BRD9-209ENST00000490814 CTDSPL2Q05D32 466 aa11.52□□□□□ -0.57
BRD9-209ENST00000490814 HSP90B2PQ58FF3 399 aa11.52□□□□□ -0.57
BRD9-209ENST00000490814 CYB5R4Q7L1T6 521 aa11.52□□□□□ -0.57
BRD9-209ENST00000490814 TBC1D10CQ8IV04 446 aa11.52□□□□□ -0.57
BRD9-209ENST00000490814 DNAJC10Q8IXB1 793 aa11.52□□□□□ -0.57
BRD9-209ENST00000490814 BAG1Q99933 345 aaPredicted RBP11.52□□□□□ -0.57
BRD9-209ENST00000490814 UTRNP46939 3433 aa11.52□□□□□ -0.57
BRD9-209ENST00000490814 H3BQF6 201 aa11.51□□□□□ -0.57
BRD9-209ENST00000490814 CDC27P30260 824 aa11.51□□□□□ -0.57
BRD9-209ENST00000490814 WWC2Q6AWC2 1192 aa11.51□□□□□ -0.57
BRD9-209ENST00000490814 EFCAB13Q8IY85 973 aa11.51□□□□□ -0.57
BRD9-209ENST00000490814 MICALL1Q8N3F8 863 aa11.51□□□□□ -0.57
BRD9-209ENST00000490814 PAIP2Q9BPZ3 127 aaKnown RBP11.51□□□□□ -0.57
BRD9-209ENST00000490814 RFX7Q2KHR2 1363 aa11.51□□□□□ -0.57
BRD9-209ENST00000490814 KDM3BQ7LBC6 1761 aa11.51□□□□□ -0.57
BRD9-209ENST00000490814 BTBD18B2RXH4 712 aa11.51□□□□□ -0.57
BRD9-209ENST00000490814 FANCGO15287 622 aa11.51□□□□□ -0.57
BRD9-209ENST00000490814 POLR2DO15514 142 aaKnown RBP11.51□□□□□ -0.57
BRD9-209ENST00000490814 IPO7O95373 1038 aaKnown RBP11.51□□□□□ -0.57
BRD9-209ENST00000490814 RHOXF2BP0C7M4 288 aa11.51□□□□□ -0.57
BRD9-209ENST00000490814 IRX1P78414 480 aaPredicted RBP11.51□□□□□ -0.57
BRD9-209ENST00000490814 KIF6Q6ZMV9 814 aa11.51□□□□□ -0.57
BRD9-209ENST00000490814 FAM210AQ96ND0 272 aa11.51□□□□□ -0.57
BRD9-209ENST00000490814 RHOXF2Q9BQY4 288 aa11.51□□□□□ -0.57
BRD9-209ENST00000490814 FUT8Q9BYC5 575 aa11.51□□□□□ -0.57
BRD9-209ENST00000490814 IRX2Q9BZI1 471 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms