RNA–Protein interactions for RNA: ENST00000489469.5

SMIM11A-206, Transcript of small integral membrane protein 11A, humanhuman

TSL 2

Gene SMIM11A, Length 780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-206ENST00000489469 FOXP2O15409 715 aa18.45■□□□□ 0.54
SMIM11A-206ENST00000489469 CAP2P40123 477 aa18.45■□□□□ 0.54
SMIM11A-206ENST00000489469 KIAA1211Q6ZU35 1233 aa18.45■□□□□ 0.54
SMIM11A-206ENST00000489469 C16orf86Q6ZW13 317 aa18.45■□□□□ 0.54
SMIM11A-206ENST00000489469 TBC1D2Q9BYX2 928 aa18.45■□□□□ 0.54
SMIM11A-206ENST00000489469 CTNNA3Q9UI47 895 aa18.45■□□□□ 0.54
SMIM11A-206ENST00000489469 CYP2D7A0A087X1C5 515 aa18.44■□□□□ 0.54
SMIM11A-206ENST00000489469 FGAP02671 866 aa18.44■□□□□ 0.54
SMIM11A-206ENST00000489469 ASNSP08243 561 aa18.44■□□□□ 0.54
SMIM11A-206ENST00000489469 MAP2K2P36507 400 aa18.44■□□□□ 0.54
SMIM11A-206ENST00000489469 VEGFBP49765 207 aa18.44■□□□□ 0.54
SMIM11A-206ENST00000489469 PPATQ06203 517 aa18.44■□□□□ 0.54
SMIM11A-206ENST00000489469 PPARAQ07869 468 aa18.44■□□□□ 0.54
SMIM11A-206ENST00000489469 CERKLQ49MI3 558 aaPredicted RBP18.44■□□□□ 0.54
SMIM11A-206ENST00000489469 WNK4Q96J92 1243 aa18.44■□□□□ 0.54
SMIM11A-206ENST00000489469 ESYT1Q9BSJ8 1104 aa18.44■□□□□ 0.54
SMIM11A-206ENST00000489469 FAM155AB1AL88 458 aaPredicted RBP18.43■□□□□ 0.54
SMIM11A-206ENST00000489469 SLURP2P0DP57 97 aa18.43■□□□□ 0.54
SMIM11A-206ENST00000489469 SHMT1P34896 483 aa18.43■□□□□ 0.54
SMIM11A-206ENST00000489469 CDK8P49336 464 aa18.43■□□□□ 0.54
SMIM11A-206ENST00000489469 PDE4BQ07343 736 aa18.43■□□□□ 0.54
SMIM11A-206ENST00000489469 SPRYD7Q5W111 196 aa18.43■□□□□ 0.54
SMIM11A-206ENST00000489469 DNAJC5GQ8N7S2 189 aa18.43■□□□□ 0.54
SMIM11A-206ENST00000489469 SPDYE1Q8NFV5 336 aaPredicted RBP18.43■□□□□ 0.54
SMIM11A-206ENST00000489469 OPTNQ96CV9 577 aa18.43■□□□□ 0.54
SMIM11A-206ENST00000489469 CCDC17Q96LX7 622 aa18.43■□□□□ 0.54
SMIM11A-206ENST00000489469 CABP5Q9NP86 173 aa18.43■□□□□ 0.54
SMIM11A-206ENST00000489469 ANAPC4Q9UJX5 808 aa18.43■□□□□ 0.54
SMIM11A-206ENST00000489469 PTPRFP10586 1907 aa18.43■□□□□ 0.54
SMIM11A-206ENST00000489469 GRM1Q13255 1194 aa18.42■□□□□ 0.54
SMIM11A-206ENST00000489469 PPIL2Q13356 520 aa18.42■□□□□ 0.54
SMIM11A-206ENST00000489469 DYNLL2Q96FJ2 89 aa18.42■□□□□ 0.54
SMIM11A-206ENST00000489469 IL25Q9H293 177 aa18.42■□□□□ 0.54
SMIM11A-206ENST00000489469 MKNK2Q9HBH9 465 aa18.42■□□□□ 0.54
SMIM11A-206ENST00000489469 PCP11498 1178 aaKnown RBP18.41■□□□□ 0.54
SMIM11A-206ENST00000489469 PTPRAP18433 802 aa18.41■□□□□ 0.54
SMIM11A-206ENST00000489469 NT5C2P49902 561 aa18.41■□□□□ 0.54
SMIM11A-206ENST00000489469 ABCB5Q2M3G0 1257 aa18.41■□□□□ 0.54
SMIM11A-206ENST00000489469 OTUD5Q96G74 571 aa18.41■□□□□ 0.54
SMIM11A-206ENST00000489469 AS3MTQ9HBK9 375 aa18.41■□□□□ 0.54
SMIM11A-206ENST00000489469 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.41■□□□□ 0.54
SMIM11A-206ENST00000489469 ZBTB21Q9ULJ3 1066 aa18.41■□□□□ 0.54
SMIM11A-206ENST00000489469 MANSC4A6NHS7 340 aaPredicted RBP18.4■□□□□ 0.54
SMIM11A-206ENST00000489469 USP17L5A8MUK1 530 aa18.4■□□□□ 0.54
SMIM11A-206ENST00000489469 ZNF213O14771 459 aa18.4■□□□□ 0.54
SMIM11A-206ENST00000489469 GDF11O95390 407 aa18.4■□□□□ 0.54
SMIM11A-206ENST00000489469 INHBEP58166 350 aa18.4■□□□□ 0.54
SMIM11A-206ENST00000489469 EVX2Q03828 476 aa18.4■□□□□ 0.54
SMIM11A-206ENST00000489469 IMMTQ16891 758 aaKnown RBP18.4■□□□□ 0.54
SMIM11A-206ENST00000489469 SLC44A5Q8NCS7 719 aa18.4■□□□□ 0.54
SMIM11A-206ENST00000489469 RNF41Q9H4P4 317 aaPredicted RBP18.4■□□□□ 0.54
SMIM11A-206ENST00000489469 GREB1LQ9C091 1923 aaPredicted RBP18.4■□□□□ 0.54
SMIM11A-206ENST00000489469 GH2P01242 217 aa18.39■□□□□ 0.53
SMIM11A-206ENST00000489469 GTF2A2P52657 109 aa18.39■□□□□ 0.53
SMIM11A-206ENST00000489469 SREBF2Q12772 1141 aa18.39■□□□□ 0.53
SMIM11A-206ENST00000489469 RRP1BQ14684 758 aaKnown RBP18.39■□□□□ 0.53
SMIM11A-206ENST00000489469 TMEM179Q6ZVK1 233 aa18.39■□□□□ 0.53
SMIM11A-206ENST00000489469 ZNF444Q8N0Y2 327 aaPredicted RBP18.39■□□□□ 0.53
SMIM11A-206ENST00000489469 MAP4K1Q92918 833 aa18.39■□□□□ 0.53
SMIM11A-206ENST00000489469 MPHOSPH10O00566 681 aaKnown RBP18.38■□□□□ 0.53
SMIM11A-206ENST00000489469 CXCL11O14625 94 aa18.38■□□□□ 0.53
SMIM11A-206ENST00000489469 EIF5BO60841 1220 aaKnown RBP18.38■□□□□ 0.53
SMIM11A-206ENST00000489469 SNAPC2Q13487 334 aa18.38■□□□□ 0.53
SMIM11A-206ENST00000489469 WDR18Q9BV38 432 aa18.38■□□□□ 0.53
SMIM11A-206ENST00000489469 ANO2Q9NQ90 1003 aa18.38■□□□□ 0.53
SMIM11A-206ENST00000489469 KCNH4Q9UQ05 1017 aa18.38■□□□□ 0.53
SMIM11A-206ENST00000489469 ZHX2Q9Y6X8 837 aa18.38■□□□□ 0.53
SMIM11A-206ENST00000489469 SMIM22K7EJ46 135 aa18.37■□□□□ 0.53
SMIM11A-206ENST00000489469 IRF6O14896 467 aa18.37■□□□□ 0.53
SMIM11A-206ENST00000489469 ORC4O43929 436 aa18.37■□□□□ 0.53
SMIM11A-206ENST00000489469 AOC2O75106 756 aa18.37■□□□□ 0.53
SMIM11A-206ENST00000489469 FGRP09769 529 aa18.37■□□□□ 0.53
SMIM11A-206ENST00000489469 RASA1P20936 1047 aa18.37■□□□□ 0.53
SMIM11A-206ENST00000489469 GJA5P36382 358 aa18.37■□□□□ 0.53
SMIM11A-206ENST00000489469 KIF23Q02241 960 aaPredicted RBP18.37■□□□□ 0.53
SMIM11A-206ENST00000489469 MAP2K1Q02750 393 aaPredicted RBP18.37■□□□□ 0.53
SMIM11A-206ENST00000489469 PTH1RQ03431 593 aa18.37■□□□□ 0.53
SMIM11A-206ENST00000489469 CTDSPL2Q05D32 466 aa18.37■□□□□ 0.53
SMIM11A-206ENST00000489469 AKNAD1Q5T1N1 836 aa18.37■□□□□ 0.53
SMIM11A-206ENST00000489469 ZNF280CQ8ND82 737 aa18.37■□□□□ 0.53
SMIM11A-206ENST00000489469 STAG1Q8WVM7 1258 aa18.37■□□□□ 0.53
SMIM11A-206ENST00000489469 LSG1Q9H089 658 aaKnown RBP18.37■□□□□ 0.53
SMIM11A-206ENST00000489469 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.37■□□□□ 0.53
SMIM11A-206ENST00000489469 AFG3L2Q9Y4W6 797 aa18.37■□□□□ 0.53
SMIM11A-206ENST00000489469 MYH4Q9Y623 1939 aa18.37■□□□□ 0.53
SMIM11A-206ENST00000489469 REC8O95072 547 aa18.36■□□□□ 0.53
SMIM11A-206ENST00000489469 CETPP11597 493 aa18.36■□□□□ 0.53
SMIM11A-206ENST00000489469 AKR1B1P15121 316 aa18.36■□□□□ 0.53
SMIM11A-206ENST00000489469 HAND2P61296 217 aa18.36■□□□□ 0.53
SMIM11A-206ENST00000489469 MKRN3Q13064 507 aaKnown RBP18.36■□□□□ 0.53
SMIM11A-206ENST00000489469 RAB3GAP1Q15042 981 aa18.36■□□□□ 0.53
SMIM11A-206ENST00000489469 PPP4R3BQ5MIZ7 849 aa18.36■□□□□ 0.53
SMIM11A-206ENST00000489469 MFSD6Q6ZSS7 791 aa18.36■□□□□ 0.53
SMIM11A-206ENST00000489469 STK11IPQ8N1F8 1099 aa18.36■□□□□ 0.53
SMIM11A-206ENST00000489469 JMYQ8N9B5 988 aa18.36■□□□□ 0.53
SMIM11A-206ENST00000489469 CEP350Q5VT06 3117 aa18.36■□□□□ 0.53
SMIM11A-206ENST00000489469 PLIN4Q96Q06 1357 aa18.35■□□□□ 0.53
SMIM11A-206ENST00000489469 PITPNM1O00562 1244 aa18.35■□□□□ 0.53
SMIM11A-206ENST00000489469 EPB41L2O43491 1005 aaKnown RBP18.35■□□□□ 0.53
SMIM11A-206ENST00000489469 TM4SF4P48230 202 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms