RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 USP9XQ93008 2570 aaPredicted RBP9.96□□□□□ -0.81
EXOSC3-206ENST00000489414 TIMP1P01033 207 aa9.96□□□□□ -0.82
EXOSC3-206ENST00000489414 NUBP1P53384 320 aa9.96□□□□□ -0.82
EXOSC3-206ENST00000489414 PUS10Q3MIT2 529 aaKnown RBP9.96□□□□□ -0.82
EXOSC3-206ENST00000489414 NOL9Q5SY16 702 aaKnown RBP9.96□□□□□ -0.82
EXOSC3-206ENST00000489414 MCTP2Q6DN12 878 aa9.96□□□□□ -0.82
EXOSC3-206ENST00000489414 MFSD5Q6N075 450 aa9.96□□□□□ -0.82
EXOSC3-206ENST00000489414 ARRDC4Q8NCT1 418 aa9.96□□□□□ -0.82
EXOSC3-206ENST00000489414 ZNF341Q9BYN7 854 aa9.96□□□□□ -0.82
EXOSC3-206ENST00000489414 ZNF536O15090 1300 aa9.96□□□□□ -0.82
EXOSC3-206ENST00000489414 LPXNO60711 386 aa9.95□□□□□ -0.82
EXOSC3-206ENST00000489414 KLRK1P26718 216 aa9.95□□□□□ -0.82
EXOSC3-206ENST00000489414 AVPR2P30518 371 aa9.95□□□□□ -0.82
EXOSC3-206ENST00000489414 ADCYAP1R1P41586 468 aa9.95□□□□□ -0.82
EXOSC3-206ENST00000489414 CCT4P50991 539 aaKnown RBP9.95□□□□□ -0.82
EXOSC3-206ENST00000489414 FAAP100Q0VG06 881 aa9.95□□□□□ -0.82
EXOSC3-206ENST00000489414 AMER1Q5JTC6 1135 aaPredicted RBP9.95□□□□□ -0.82
EXOSC3-206ENST00000489414 DCAF15Q66K64 600 aa9.95□□□□□ -0.82
EXOSC3-206ENST00000489414 GADL1Q6ZQY3 521 aa9.95□□□□□ -0.82
EXOSC3-206ENST00000489414 FRMD5Q7Z6J6 570 aa9.95□□□□□ -0.82
EXOSC3-206ENST00000489414 ADHFE1Q8IWW8 467 aa9.95□□□□□ -0.82
EXOSC3-206ENST00000489414 HOOK2Q96ED9 719 aa9.95□□□□□ -0.82
EXOSC3-206ENST00000489414 CERS4Q9HA82 394 aa9.95□□□□□ -0.82
EXOSC3-206ENST00000489414 ZNF112Q9UJU3 913 aa9.95□□□□□ -0.82
EXOSC3-206ENST00000489414 UTYO14607 1347 aa9.95□□□□□ -0.82
EXOSC3-206ENST00000489414 FRYQ5TBA9 3013 aa9.95□□□□□ -0.82
EXOSC3-206ENST00000489414 PQBP1O60828 265 aaKnown RBP9.94□□□□□ -0.82
EXOSC3-206ENST00000489414 ACRP10323 421 aa9.94□□□□□ -0.82
EXOSC3-206ENST00000489414 GCLCP48506 637 aaPredicted RBP9.94□□□□□ -0.82
EXOSC3-206ENST00000489414 FKBP1AP62942 108 aaKnown RBP9.94□□□□□ -0.82
EXOSC3-206ENST00000489414 GRB10Q13322 594 aa9.94□□□□□ -0.82
EXOSC3-206ENST00000489414 CDCA8Q53HL2 280 aa9.94□□□□□ -0.82
EXOSC3-206ENST00000489414 MAMSTRQ6ZN01 415 aa9.94□□□□□ -0.82
EXOSC3-206ENST00000489414 FERMT2Q96AC1 680 aa9.94□□□□□ -0.82
EXOSC3-206ENST00000489414 CHAMP1Q96JM3 812 aa9.94□□□□□ -0.82
EXOSC3-206ENST00000489414 APBA2Q99767 749 aa9.94□□□□□ -0.82
EXOSC3-206ENST00000489414 THUMPD2Q9BTF0 503 aaKnown RBP9.94□□□□□ -0.82
EXOSC3-206ENST00000489414 IRS4O14654 1257 aaPredicted RBP9.93□□□□□ -0.82
EXOSC3-206ENST00000489414 KDM4AO75164 1064 aa9.93□□□□□ -0.82
EXOSC3-206ENST00000489414 CSF2RAP15509 400 aa9.93□□□□□ -0.82
EXOSC3-206ENST00000489414 PROSER3Q2NL68 480 aa9.93□□□□□ -0.82
EXOSC3-206ENST00000489414 MIGA2Q7L4E1 593 aa9.93□□□□□ -0.82
EXOSC3-206ENST00000489414 DZIP1LQ8IYY4 767 aaKnown RBP9.93□□□□□ -0.82
EXOSC3-206ENST00000489414 CCER1Q8TC90 406 aaPredicted RBP9.93□□□□□ -0.82
EXOSC3-206ENST00000489414 MTIF3Q9H2K0 278 aaKnown RBP9.93□□□□□ -0.82
EXOSC3-206ENST00000489414 SERPINA10Q9UK55 444 aa9.93□□□□□ -0.82
EXOSC3-206ENST00000489414 TBX21Q9UL17 535 aa9.93□□□□□ -0.82
EXOSC3-206ENST00000489414 PNMA3Q9UL41 463 aa9.93□□□□□ -0.82
EXOSC3-206ENST00000489414 AGTPBP1Q9UPW5 1226 aa9.93□□□□□ -0.82
EXOSC3-206ENST00000489414 PHIPQ8WWQ0 1821 aa9.93□□□□□ -0.82
EXOSC3-206ENST00000489414 SPEF2Q9C093 1822 aa9.92□□□□□ -0.82
EXOSC3-206ENST00000489414 CA3P07451 260 aa9.92□□□□□ -0.82
EXOSC3-206ENST00000489414 RGS2P41220 211 aa9.92□□□□□ -0.82
EXOSC3-206ENST00000489414 PDIA6Q15084 440 aa9.92□□□□□ -0.82
EXOSC3-206ENST00000489414 COPS6Q7L5N1 327 aa9.92□□□□□ -0.82
EXOSC3-206ENST00000489414 ANKRD33Q7Z3H0 272 aa9.92□□□□□ -0.82
EXOSC3-206ENST00000489414 RNF135Q8IUD6 432 aa9.92□□□□□ -0.82
EXOSC3-206ENST00000489414 ANKRD18AQ8IVF6 992 aa9.92□□□□□ -0.82
EXOSC3-206ENST00000489414 KIAA2013Q8IYS2 634 aa9.92□□□□□ -0.82
EXOSC3-206ENST00000489414 NEK9Q8TD19 979 aa9.92□□□□□ -0.82
EXOSC3-206ENST00000489414 CD209Q9NNX6 404 aa9.92□□□□□ -0.82
EXOSC3-206ENST00000489414 MINPP1Q9UNW1 487 aa9.92□□□□□ -0.82
EXOSC3-206ENST00000489414 CNGA1P29973 690 aa9.91□□□□□ -0.82
EXOSC3-206ENST00000489414 MAP2K5Q13163 448 aa9.91□□□□□ -0.82
EXOSC3-206ENST00000489414 MORN1Q5T089 497 aa9.91□□□□□ -0.82
EXOSC3-206ENST00000489414 TREML2Q5T2D2 321 aa9.91□□□□□ -0.82
EXOSC3-206ENST00000489414 TRPV1Q8NER1 839 aa9.91□□□□□ -0.82
EXOSC3-206ENST00000489414 ARNTL2Q8WYA1 636 aa9.91□□□□□ -0.82
EXOSC3-206ENST00000489414 TOX2Q96NM4 488 aa9.91□□□□□ -0.82
EXOSC3-206ENST00000489414 LMCD1Q9NZU5 365 aa9.91□□□□□ -0.82
EXOSC3-206ENST00000489414 MORF4L1Q9UBU8 362 aa9.91□□□□□ -0.82
EXOSC3-206ENST00000489414 AFG3L2Q9Y4W6 797 aa9.91□□□□□ -0.82
EXOSC3-206ENST00000489414 LOC400499M0QZD8 3231 aa9.91□□□□□ -0.82
EXOSC3-206ENST00000489414 OTOGLQ3ZCN5 2332 aa9.9□□□□□ -0.82
EXOSC3-206ENST00000489414 NBPF20Q3BBV1 942 aa9.9□□□□□ -0.82
EXOSC3-206ENST00000489414 RTL5Q5HYW3 569 aaPredicted RBP9.9□□□□□ -0.82
EXOSC3-206ENST00000489414 LCE2DQ5TA82 110 aaPredicted RBP9.9□□□□□ -0.82
EXOSC3-206ENST00000489414 MFSD14CQ5VZR4 134 aa9.9□□□□□ -0.82
EXOSC3-206ENST00000489414 MCM10Q7L590 875 aa9.9□□□□□ -0.82
EXOSC3-206ENST00000489414 FAM83AQ86UY5 434 aa9.9□□□□□ -0.82
EXOSC3-206ENST00000489414 TMEM199Q8N511 208 aa9.9□□□□□ -0.82
EXOSC3-206ENST00000489414 FLRT1Q9NZU1 646 aa9.9□□□□□ -0.82
EXOSC3-206ENST00000489414 PHF24Q9UPV7 400 aa9.9□□□□□ -0.82
EXOSC3-206ENST00000489414 LEMD3Q9Y2U8 911 aa9.9□□□□□ -0.82
EXOSC3-206ENST00000489414 ZHX2Q9Y6X8 837 aa9.9□□□□□ -0.82
EXOSC3-206ENST00000489414 LOC285556D6RIA3 1793 aa9.9□□□□□ -0.82
EXOSC3-206ENST00000489414 ADRB1P08588 477 aa9.89□□□□□ -0.83
EXOSC3-206ENST00000489414 CACNB3P54284 484 aa9.89□□□□□ -0.83
EXOSC3-206ENST00000489414 LRRC41Q15345 812 aa9.89□□□□□ -0.83
EXOSC3-206ENST00000489414 CCDC152Q4G0S7 254 aa9.89□□□□□ -0.83
EXOSC3-206ENST00000489414 TDRD7Q8NHU6 1098 aaKnown RBP9.89□□□□□ -0.83
EXOSC3-206ENST00000489414 KIF12Q96FN5 646 aa9.89□□□□□ -0.83
EXOSC3-206ENST00000489414 FAM163AQ96GL9 167 aaPredicted RBP9.89□□□□□ -0.83
EXOSC3-206ENST00000489414 IL23AQ9NPF7 189 aa9.89□□□□□ -0.83
EXOSC3-206ENST00000489414 SCUBE2Q9NQ36 999 aa9.89□□□□□ -0.83
EXOSC3-206ENST00000489414 ARHGEF15O94989 841 aa9.88□□□□□ -0.83
EXOSC3-206ENST00000489414 CYBAP13498 195 aa9.88□□□□□ -0.83
EXOSC3-206ENST00000489414 ZXDAP98168 799 aa9.88□□□□□ -0.83
EXOSC3-206ENST00000489414 TAP1Q03518 808 aa9.88□□□□□ -0.83
EXOSC3-206ENST00000489414 DMWDQ09019 674 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms