RNA–Protein interactions for RNA: ENST00000489030.1

USP11-210, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-210ENST00000489030 RAI14Q9P0K7 980 aa14.09□□□□□ -0.15
USP11-210ENST00000489030 MORF4L1Q9UBU8 362 aa14.09□□□□□ -0.15
USP11-210ENST00000489030 OGDHLQ9ULD0 1010 aa14.09□□□□□ -0.15
USP11-210ENST00000489030 HDAC5Q9UQL6 1122 aa14.09□□□□□ -0.15
USP11-210ENST00000489030 ATAD5Q96QE3 1844 aa14.08□□□□□ -0.15
USP11-210ENST00000489030 GDF11O95390 407 aa14.08□□□□□ -0.16
USP11-210ENST00000489030 PRKAR2AP13861 404 aaKnown RBP14.08□□□□□ -0.16
USP11-210ENST00000489030 NBPF3Q9H094 633 aa14.08□□□□□ -0.16
USP11-210ENST00000489030 PORCNQ9H237 461 aa14.08□□□□□ -0.16
USP11-210ENST00000489030 RBPJLQ9UBG7 517 aa14.08□□□□□ -0.16
USP11-210ENST00000489030 COL2A1P02458 1487 aaPredicted RBP14.07□□□□□ -0.16
USP11-210ENST00000489030 PNMA6EA0A0J9YXQ4 647 aa14.07□□□□□ -0.16
USP11-210ENST00000489030 GNAI3P08754 354 aa14.07□□□□□ -0.16
USP11-210ENST00000489030 ARID4AP29374 1257 aaPredicted RBP14.07□□□□□ -0.16
USP11-210ENST00000489030 CCND3P30281 292 aaPredicted RBP14.07□□□□□ -0.16
USP11-210ENST00000489030 MAPKAPK5Q8IW41 473 aa14.07□□□□□ -0.16
USP11-210ENST00000489030 ANKLE1Q8NAG6 615 aa14.07□□□□□ -0.16
USP11-210ENST00000489030 USP6NLQ92738 828 aa14.07□□□□□ -0.16
USP11-210ENST00000489030 AATFQ9NY61 560 aaKnown RBP eCLIP14.07□□□□□ -0.16
USP11-210ENST00000489030 COL6A1P12109 1028 aa14.06□□□□□ -0.16
USP11-210ENST00000489030 BACE1P56817 501 aa14.06□□□□□ -0.16
USP11-210ENST00000489030 HERVK_113P62684 666 aa14.06□□□□□ -0.16
USP11-210ENST00000489030 IRX3P78415 501 aaPredicted RBP14.06□□□□□ -0.16
USP11-210ENST00000489030 CACNB2Q08289 660 aaPredicted RBP14.06□□□□□ -0.16
USP11-210ENST00000489030 MTX1Q13505 466 aa14.06□□□□□ -0.16
USP11-210ENST00000489030 AAMPQ13685 434 aa14.06□□□□□ -0.16
USP11-210ENST00000489030 LRRC26Q2I0M4 334 aa14.06□□□□□ -0.16
USP11-210ENST00000489030 LHX8Q68G74 356 aa14.06□□□□□ -0.16
USP11-210ENST00000489030 TGFBRAP1Q8WUH2 860 aa14.06□□□□□ -0.16
USP11-210ENST00000489030 CRBNQ96SW2 442 aa14.06□□□□□ -0.16
USP11-210ENST00000489030 WDR18Q9BV38 432 aa14.06□□□□□ -0.16
USP11-210ENST00000489030 MTMR10Q9NXD2 777 aa14.06□□□□□ -0.16
USP11-210ENST00000489030 AKAP2Q9Y2D5 859 aa14.06□□□□□ -0.16
USP11-210ENST00000489030 CNMDO75829 334 aa14.05□□□□□ -0.16
USP11-210ENST00000489030 IRX6P78412 446 aaPredicted RBP14.05□□□□□ -0.16
USP11-210ENST00000489030 GSTO1P78417 241 aa14.05□□□□□ -0.16
USP11-210ENST00000489030 LRIT3Q3SXY7 679 aa14.05□□□□□ -0.16
USP11-210ENST00000489030 EMILIN3Q9NT22 766 aa14.05□□□□□ -0.16
USP11-210ENST00000489030 FLRT1Q9NZU1 646 aa14.05□□□□□ -0.16
USP11-210ENST00000489030 SAP30BPQ9UHR5 308 aaKnown RBP14.05□□□□□ -0.16
USP11-210ENST00000489030 PALD1Q9ULE6 856 aa14.05□□□□□ -0.16
USP11-210ENST00000489030 NDUFB9Q9Y6M9 179 aa14.05□□□□□ -0.16
USP11-210ENST00000489030 LDHCP07864 332 aa14.04□□□□□ -0.16
USP11-210ENST00000489030 HOXA7P31268 230 aaPredicted RBP14.04□□□□□ -0.16
USP11-210ENST00000489030 DYNLL1P63167 89 aaKnown RBP14.04□□□□□ -0.16
USP11-210ENST00000489030 MDM2Q00987 491 aaPredicted RBP14.04□□□□□ -0.16
USP11-210ENST00000489030 MORN1Q5T089 497 aa14.04□□□□□ -0.16
USP11-210ENST00000489030 TDHQ8IZJ6 230 aa14.04□□□□□ -0.16
USP11-210ENST00000489030 GPRC5AQ8NFJ5 357 aa14.04□□□□□ -0.16
USP11-210ENST00000489030 NUDT12Q9BQG2 462 aa14.04□□□□□ -0.16
USP11-210ENST00000489030 PAGR1Q9BTK6 254 aa14.04□□□□□ -0.16
USP11-210ENST00000489030 UBE2OQ9C0C9 1292 aaKnown RBP14.04□□□□□ -0.16
USP11-210ENST00000489030 PIH1D3Q9NQM4 214 aaKnown RBP14.04□□□□□ -0.16
USP11-210ENST00000489030 LRP2BPQ9P2M1 347 aa14.04□□□□□ -0.16
USP11-210ENST00000489030 PI4KBQ9UBF8 816 aa14.04□□□□□ -0.16
USP11-210ENST00000489030 HERC5Q9UII4 1024 aaKnown RBP14.04□□□□□ -0.16
USP11-210ENST00000489030 FLT1P17948 1338 aa14.04□□□□□ -0.16
USP11-210ENST00000489030 CAPN2P17655 700 aa14.03□□□□□ -0.16
USP11-210ENST00000489030 ERVK-9P63128 1117 aa14.03□□□□□ -0.16
USP11-210ENST00000489030 ERVK-24P63145 666 aa14.03□□□□□ -0.16
USP11-210ENST00000489030 PABPC4Q13310 644 aaKnown RBP eCLIP14.03□□□□□ -0.16
USP11-210ENST00000489030 GORABQ5T7V8 394 aa14.03□□□□□ -0.16
USP11-210ENST00000489030 GPR142Q7Z601 462 aa14.03□□□□□ -0.16
USP11-210ENST00000489030 METTL16Q86W50 562 aaKnown RBP14.03□□□□□ -0.16
USP11-210ENST00000489030 DBNDD2Q9BQY9 259 aa14.03□□□□□ -0.16
USP11-210ENST00000489030 AS3MTQ9HBK9 375 aa14.03□□□□□ -0.16
USP11-210ENST00000489030 TMOD4Q9NZQ9 345 aa14.03□□□□□ -0.16
USP11-210ENST00000489030 ZBTB21Q9ULJ3 1066 aa14.03□□□□□ -0.16
USP11-210ENST00000489030 MAP4K4O95819 1239 aaPredicted RBP14.02□□□□□ -0.17
USP11-210ENST00000489030 GNAI2P04899 355 aa14.02□□□□□ -0.17
USP11-210ENST00000489030 CYP2E1P05181 493 aaPredicted RBP14.02□□□□□ -0.17
USP11-210ENST00000489030 XRCC5P13010 732 aaKnown RBP14.02□□□□□ -0.17
USP11-210ENST00000489030 ZKSCAN1P17029 563 aaPredicted RBP14.02□□□□□ -0.17
USP11-210ENST00000489030 ZYXQ15942 572 aaKnown RBP14.02□□□□□ -0.17
USP11-210ENST00000489030 ERICH6BQ5W0A0 696 aa14.02□□□□□ -0.17
USP11-210ENST00000489030 NAA16Q6N069 864 aaPredicted RBP14.02□□□□□ -0.17
USP11-210ENST00000489030 EXOC6Q8TAG9 804 aa14.02□□□□□ -0.17
USP11-210ENST00000489030 TBC1D2Q9BYX2 928 aa14.02□□□□□ -0.17
USP11-210ENST00000489030 ZBTB40Q9NUA8 1239 aa14.02□□□□□ -0.17
USP11-210ENST00000489030 STXBP5LQ9Y2K9 1186 aa14.02□□□□□ -0.17
USP11-210ENST00000489030 USP17L10C9JJH3 530 aa14.01□□□□□ -0.17
USP11-210ENST00000489030 GH2P01242 217 aa14.01□□□□□ -0.17
USP11-210ENST00000489030 ASNSP08243 561 aa14.01□□□□□ -0.17
USP11-210ENST00000489030 ZAP70P43403 619 aa14.01□□□□□ -0.17
USP11-210ENST00000489030 PPP4CP60510 307 aa14.01□□□□□ -0.17
USP11-210ENST00000489030 EVX2Q03828 476 aa14.01□□□□□ -0.17
USP11-210ENST00000489030 GPR153Q6NV75 609 aa14.01□□□□□ -0.17
USP11-210ENST00000489030 SOCS4Q8WXH5 440 aa14.01□□□□□ -0.17
USP11-210ENST00000489030 GUCD1Q96NT3 240 aa14.01□□□□□ -0.17
USP11-210ENST00000489030 TLR7Q9NYK1 1049 aaKnown RBP14.01□□□□□ -0.17
USP11-210ENST00000489030 CDK5RAP2Q96SN8 1893 aa14.01□□□□□ -0.17
USP11-210ENST00000489030 MYO5AQ9Y4I1 1855 aaKnown RBP14.01□□□□□ -0.17
USP11-210ENST00000489030 C19orf81C9J6K1 198 aa14□□□□□ -0.17
USP11-210ENST00000489030 MAPK4P31152 587 aa14□□□□□ -0.17
USP11-210ENST00000489030 TNNI3KQ59H18 835 aa14□□□□□ -0.17
USP11-210ENST00000489030 PLEKHH3Q7Z736 793 aa14□□□□□ -0.17
USP11-210ENST00000489030 TRPV1Q8NER1 839 aa14□□□□□ -0.17
USP11-210ENST00000489030 ACER1Q8TDN7 264 aa14□□□□□ -0.17
USP11-210ENST00000489030 FAM161BQ96MY7 647 aa14□□□□□ -0.17
USP11-210ENST00000489030 APBA2Q99767 749 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms