RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 PAK6Q9NQU5 681 aaPredicted RBP4.45□□□□□ -1.7
CALD1-221ENST00000489019 KBTBD4Q9NVX7 518 aa4.45□□□□□ -1.7
CALD1-221ENST00000489019 TJP2Q9UDY2 1190 aa4.45□□□□□ -1.7
CALD1-221ENST00000489019 PGRP06401 933 aa4.44□□□□□ -1.7
CALD1-221ENST00000489019 ITIH2P19823 946 aa4.44□□□□□ -1.7
CALD1-221ENST00000489019 IFI16Q16666 785 aaKnown RBP4.44□□□□□ -1.7
CALD1-221ENST00000489019 RELL1Q8IUW5 271 aa4.44□□□□□ -1.7
CALD1-221ENST00000489019 GOLM1Q8NBJ4 401 aa4.44□□□□□ -1.7
CALD1-221ENST00000489019 FLCNQ8NFG4 579 aa4.44□□□□□ -1.7
CALD1-221ENST00000489019 FBXO27Q8NI29 283 aa4.44□□□□□ -1.7
CALD1-221ENST00000489019 XAGE3Q8WTP9 111 aa4.44□□□□□ -1.7
CALD1-221ENST00000489019 ACSF2Q96CM8 615 aaPredicted RBP4.44□□□□□ -1.7
CALD1-221ENST00000489019 MIPEPQ99797 713 aa4.44□□□□□ -1.7
CALD1-221ENST00000489019 TNKS2Q9H2K2 1166 aa4.44□□□□□ -1.7
CALD1-221ENST00000489019 ADGRE2Q9UHX3 823 aa4.44□□□□□ -1.7
CALD1-221ENST00000489019 TACC3Q9Y6A5 838 aa4.44□□□□□ -1.7
CALD1-221ENST00000489019 TOP2AP11388 1531 aaKnown RBP4.44□□□□□ -1.7
CALD1-221ENST00000489019 PRR33A8MZF0 331 aa4.43□□□□□ -1.7
CALD1-221ENST00000489019 IGF2BP3O00425 579 aaKnown RBP eCLIP4.43□□□□□ -1.7
CALD1-221ENST00000489019 CST3P01034 146 aaPredicted RBP4.43□□□□□ -1.7
CALD1-221ENST00000489019 NKPD1Q17RQ9 610 aa4.43□□□□□ -1.7
CALD1-221ENST00000489019 FBXL19Q6PCT2 694 aa4.43□□□□□ -1.7
CALD1-221ENST00000489019 NPM2Q86SE8 214 aaKnown RBP4.43□□□□□ -1.7
CALD1-221ENST00000489019 SPACA3Q8IXA5 215 aa4.43□□□□□ -1.7
CALD1-221ENST00000489019 TP53INP2Q8IXH6 220 aa4.43□□□□□ -1.7
CALD1-221ENST00000489019 MRPL41Q8IXM3 137 aaKnown RBP4.43□□□□□ -1.7
CALD1-221ENST00000489019 MFSD2AQ8NA29 543 aa4.43□□□□□ -1.7
CALD1-221ENST00000489019 TMEM87BQ96K49 555 aa4.43□□□□□ -1.7
CALD1-221ENST00000489019 FBXL18Q96ME1 805 aa4.43□□□□□ -1.7
CALD1-221ENST00000489019 BACH2Q9BYV9 841 aa4.43□□□□□ -1.7
CALD1-221ENST00000489019 PRDM5Q9NQX1 630 aaPredicted RBP4.43□□□□□ -1.7
CALD1-221ENST00000489019 GTF2IRD1Q9UHL9 959 aa4.43□□□□□ -1.7
CALD1-221ENST00000489019 SLC5A6Q9Y289 635 aa4.43□□□□□ -1.7
CALD1-221ENST00000489019 POLR3KQ9Y2Y1 108 aaPredicted RBP4.43□□□□□ -1.7
CALD1-221ENST00000489019 BICRAQ9NZM4 1560 aa4.43□□□□□ -1.7
CALD1-221ENST00000489019 RBM47A0AV96 593 aaKnown RBP4.42□□□□□ -1.7
CALD1-221ENST00000489019 UPK3BL1B0FP48 263 aa4.42□□□□□ -1.7
CALD1-221ENST00000489019 UPK3BL2E5RIL1 263 aa4.42□□□□□ -1.7
CALD1-221ENST00000489019 GRIN3BO60391 1043 aa4.42□□□□□ -1.7
CALD1-221ENST00000489019 CD8BP10966 210 aa4.42□□□□□ -1.7
CALD1-221ENST00000489019 ITGAEP38570 1179 aa4.42□□□□□ -1.7
CALD1-221ENST00000489019 IRAK1P51617 712 aa4.42□□□□□ -1.7
CALD1-221ENST00000489019 PRKCQQ04759 706 aa4.42□□□□□ -1.7
CALD1-221ENST00000489019 PDE4BQ07343 736 aa4.42□□□□□ -1.7
CALD1-221ENST00000489019 PWP1Q13610 501 aa4.42□□□□□ -1.7
CALD1-221ENST00000489019 AOC3Q16853 763 aa4.42□□□□□ -1.7
CALD1-221ENST00000489019 MCTP1Q6DN14 999 aa4.42□□□□□ -1.7
CALD1-221ENST00000489019 LETMD1Q6P1Q0 360 aa4.42□□□□□ -1.7
CALD1-221ENST00000489019 ARHGAP27Q6ZUM4 889 aa4.42□□□□□ -1.7
CALD1-221ENST00000489019 CBLL1Q75N03 491 aa4.42□□□□□ -1.7
CALD1-221ENST00000489019 MCATQ8IVS2 390 aaKnown RBP4.42□□□□□ -1.7
CALD1-221ENST00000489019 MISP3Q96FF7 219 aa4.42□□□□□ -1.7
CALD1-221ENST00000489019 KRTAP4-8Q9BYQ9 185 aa4.42□□□□□ -1.7
CALD1-221ENST00000489019 KCNQ5Q9NR82 932 aa4.42□□□□□ -1.7
CALD1-221ENST00000489019 ADAM30Q9UKF2 790 aa4.42□□□□□ -1.7
CALD1-221ENST00000489019 MAPK8IP1Q9UQF2 711 aa4.42□□□□□ -1.7
CALD1-221ENST00000489019 PRR36Q9H6K5 1346 aa4.42□□□□□ -1.7
CALD1-221ENST00000489019 GREM1O60565 184 aa4.41□□□□□ -1.7
CALD1-221ENST00000489019 DNAJA2O60884 412 aa4.41□□□□□ -1.7
CALD1-221ENST00000489019 BPNT1O95861 308 aa4.41□□□□□ -1.7
CALD1-221ENST00000489019 TAL1P17542 331 aaPredicted RBP4.41□□□□□ -1.7
CALD1-221ENST00000489019 PLCG1P19174 1290 aa4.41□□□□□ -1.7
CALD1-221ENST00000489019 EIF4A3P38919 411 aaKnown RBP4.41□□□□□ -1.7
CALD1-221ENST00000489019 CRKP46108 304 aa4.41□□□□□ -1.7
CALD1-221ENST00000489019 MPP2Q14168 576 aa4.41□□□□□ -1.7
CALD1-221ENST00000489019 TMEM201Q5SNT2 666 aa4.41□□□□□ -1.7
CALD1-221ENST00000489019 SNAP47Q5SQN1 464 aa4.41□□□□□ -1.7
CALD1-221ENST00000489019 SLC6A19Q695T7 634 aa4.41□□□□□ -1.7
CALD1-221ENST00000489019 FAM196AQ6ZSG2 479 aa4.41□□□□□ -1.7
CALD1-221ENST00000489019 HS2ST1Q7LGA3 356 aa4.41□□□□□ -1.7
CALD1-221ENST00000489019 REC114Q7Z4M0 266 aa4.41□□□□□ -1.7
CALD1-221ENST00000489019 CDH24Q86UP0 819 aa4.41□□□□□ -1.7
CALD1-221ENST00000489019 STK11IPQ8N1F8 1099 aa4.41□□□□□ -1.7
CALD1-221ENST00000489019 TMEM87AQ8NBN3 555 aa4.41□□□□□ -1.7
CALD1-221ENST00000489019 HRASLS5Q96KN8 279 aa4.41□□□□□ -1.7
CALD1-221ENST00000489019 ADAMTS1Q9UHI8 967 aa4.41□□□□□ -1.7
CALD1-221ENST00000489019 GGT7Q9UJ14 662 aa4.41□□□□□ -1.7
CALD1-221ENST00000489019 VAV3Q9UKW4 847 aa4.41□□□□□ -1.7
CALD1-221ENST00000489019 TPX2Q9ULW0 747 aaKnown RBP4.41□□□□□ -1.7
CALD1-221ENST00000489019 CCDC88BA6NC98 1476 aa4.41□□□□□ -1.7
CALD1-221ENST00000489019 COL17A1Q9UMD9 1497 aaPredicted RBP4.41□□□□□ -1.7
CALD1-221ENST00000489019 TMEM265A0A087WTH1 108 aa4.4□□□□□ -1.71
CALD1-221ENST00000489019 TLR3O15455 904 aaKnown RBP4.4□□□□□ -1.71
CALD1-221ENST00000489019 HTR3BO95264 441 aa4.4□□□□□ -1.71
CALD1-221ENST00000489019 ZNF865P0CJ78 1059 aaPredicted RBP4.4□□□□□ -1.71
CALD1-221ENST00000489019 FANCCQ00597 558 aa4.4□□□□□ -1.71
CALD1-221ENST00000489019 SFRP5Q5T4F7 317 aa4.4□□□□□ -1.71
CALD1-221ENST00000489019 C22orf34Q6ZV56 151 aa4.4□□□□□ -1.71
CALD1-221ENST00000489019 AGBL5Q8NDL9 886 aa4.4□□□□□ -1.71
CALD1-221ENST00000489019 DNAJB8Q8NHS0 232 aa4.4□□□□□ -1.71
CALD1-221ENST00000489019 PPP1R13LQ8WUF5 828 aa4.4□□□□□ -1.71
CALD1-221ENST00000489019 PCGF6Q9BYE7 350 aa4.4□□□□□ -1.71
CALD1-221ENST00000489019 REV1Q9UBZ9 1251 aa4.4□□□□□ -1.71
CALD1-221ENST00000489019 ADAMTS6Q9UKP5 1117 aa4.4□□□□□ -1.71
CALD1-221ENST00000489019 SNX11Q9Y5W9 270 aa4.4□□□□□ -1.71
CALD1-221ENST00000489019 SMARCA2P51531 1590 aa4.4□□□□□ -1.71
CALD1-221ENST00000489019 GNAT3A8MTJ3 354 aa4.39□□□□□ -1.71
CALD1-221ENST00000489019 CHURC1-FNTBB4DL54 471 aa4.39□□□□□ -1.71
CALD1-221ENST00000489019 CBX7O95931 251 aa4.39□□□□□ -1.71
CALD1-221ENST00000489019 RECKO95980 971 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms