RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 TATDN1Q6P1N9 297 aa18.71■□□□□ 0.59
C9orf3-219ENST00000488186 C16orf86Q6ZW13 317 aa18.71■□□□□ 0.59
C9orf3-219ENST00000488186 ZNF444Q8N0Y2 327 aaPredicted RBP18.71■□□□□ 0.59
C9orf3-219ENST00000488186 OTUD5Q96G74 571 aa18.71■□□□□ 0.59
C9orf3-219ENST00000488186 WNK4Q96J92 1243 aa18.71■□□□□ 0.59
C9orf3-219ENST00000488186 DNAJC18Q9H819 358 aa18.71■□□□□ 0.59
C9orf3-219ENST00000488186 GINM1Q9NU53 330 aa18.71■□□□□ 0.59
C9orf3-219ENST00000488186 SNCAIPQ9Y6H5 919 aa18.71■□□□□ 0.59
C9orf3-219ENST00000488186 ASNSP08243 561 aa18.7■□□□□ 0.58
C9orf3-219ENST00000488186 SHMT1P34896 483 aa18.7■□□□□ 0.58
C9orf3-219ENST00000488186 TM4SF4P48230 202 aa18.7■□□□□ 0.58
C9orf3-219ENST00000488186 PPATQ06203 517 aa18.7■□□□□ 0.58
C9orf3-219ENST00000488186 IMMTQ16891 758 aaKnown RBP18.7■□□□□ 0.58
C9orf3-219ENST00000488186 ANO2Q9NQ90 1003 aa18.7■□□□□ 0.58
C9orf3-219ENST00000488186 SPDYE5A6NIY4 337 aa18.69■□□□□ 0.58
C9orf3-219ENST00000488186 FOXP2O15409 715 aa18.69■□□□□ 0.58
C9orf3-219ENST00000488186 AOC2O75106 756 aa18.69■□□□□ 0.58
C9orf3-219ENST00000488186 GH2P01242 217 aa18.69■□□□□ 0.58
C9orf3-219ENST00000488186 PTPRAP18433 802 aa18.69■□□□□ 0.58
C9orf3-219ENST00000488186 KIF23Q02241 960 aaPredicted RBP18.69■□□□□ 0.58
C9orf3-219ENST00000488186 CTDSPL2Q05D32 466 aa18.69■□□□□ 0.58
C9orf3-219ENST00000488186 SLC44A5Q8NCS7 719 aa18.69■□□□□ 0.58
C9orf3-219ENST00000488186 CCDC17Q96LX7 622 aa18.69■□□□□ 0.58
C9orf3-219ENST00000488186 IL25Q9H293 177 aa18.69■□□□□ 0.58
C9orf3-219ENST00000488186 AS3MTQ9HBK9 375 aa18.69■□□□□ 0.58
C9orf3-219ENST00000488186 TOMM22Q9NS69 142 aa18.69■□□□□ 0.58
C9orf3-219ENST00000488186 ZHX2Q9Y6X8 837 aa18.69■□□□□ 0.58
C9orf3-219ENST00000488186 ZMYM6O95789 1325 aa18.69■□□□□ 0.58
C9orf3-219ENST00000488186 MANSC4A6NHS7 340 aaPredicted RBP18.68■□□□□ 0.58
C9orf3-219ENST00000488186 USP17L5A8MUK1 530 aa18.68■□□□□ 0.58
C9orf3-219ENST00000488186 SMIM22K7EJ46 135 aa18.68■□□□□ 0.58
C9orf3-219ENST00000488186 HSPA1AP0DMV8 641 aaKnown RBP18.68■□□□□ 0.58
C9orf3-219ENST00000488186 HSPA1BP0DMV9 641 aaKnown RBP18.68■□□□□ 0.58
C9orf3-219ENST00000488186 HAND2P61296 217 aa18.68■□□□□ 0.58
C9orf3-219ENST00000488186 RAB3GAP1Q15042 981 aa18.68■□□□□ 0.58
C9orf3-219ENST00000488186 CNKSR2Q8WXI2 1034 aa18.68■□□□□ 0.58
C9orf3-219ENST00000488186 SAGE1Q9NXZ1 904 aa18.68■□□□□ 0.58
C9orf3-219ENST00000488186 U3KPZ7 1027 aaPredicted RBP18.68■□□□□ 0.58
C9orf3-219ENST00000488186 PRDM1O75626 825 aa18.67■□□□□ 0.58
C9orf3-219ENST00000488186 PTH1RQ03431 593 aa18.67■□□□□ 0.58
C9orf3-219ENST00000488186 SREBF2Q12772 1141 aa18.67■□□□□ 0.58
C9orf3-219ENST00000488186 PPIL2Q13356 520 aa18.67■□□□□ 0.58
C9orf3-219ENST00000488186 RRP1BQ14684 758 aaKnown RBP18.67■□□□□ 0.58
C9orf3-219ENST00000488186 BEGAINQ9BUH8 593 aa18.67■□□□□ 0.58
C9orf3-219ENST00000488186 TBC1D2Q9BYX2 928 aa18.67■□□□□ 0.58
C9orf3-219ENST00000488186 RNF41Q9H4P4 317 aaPredicted RBP18.67■□□□□ 0.58
C9orf3-219ENST00000488186 ANAPC4Q9UJX5 808 aa18.67■□□□□ 0.58
C9orf3-219ENST00000488186 ZBTB21Q9ULJ3 1066 aa18.67■□□□□ 0.58
C9orf3-219ENST00000488186 TESPA1A2RU30 521 aaPredicted RBP18.66■□□□□ 0.58
C9orf3-219ENST00000488186 GTF2A2P52657 109 aa18.66■□□□□ 0.58
C9orf3-219ENST00000488186 SNAPC2Q13487 334 aa18.66■□□□□ 0.58
C9orf3-219ENST00000488186 MFSD6Q6ZSS7 791 aa18.66■□□□□ 0.58
C9orf3-219ENST00000488186 DDX60LQ5H9U9 1706 aaKnown RBP18.66■□□□□ 0.58
C9orf3-219ENST00000488186 SIPA1L1O43166 1804 aa18.65■□□□□ 0.58
C9orf3-219ENST00000488186 TRIM75PA6NK02 468 aa18.65■□□□□ 0.58
C9orf3-219ENST00000488186 IRF6O14896 467 aa18.65■□□□□ 0.58
C9orf3-219ENST00000488186 TSPY3P0CV98 308 aa18.65■□□□□ 0.58
C9orf3-219ENST00000488186 TSPY8P0CW00 308 aa18.65■□□□□ 0.58
C9orf3-219ENST00000488186 AKR1B1P15121 316 aa18.65■□□□□ 0.58
C9orf3-219ENST00000488186 RRP12Q5JTH9 1297 aaKnown RBP18.65■□□□□ 0.58
C9orf3-219ENST00000488186 TMEM179Q6ZVK1 233 aa18.65■□□□□ 0.58
C9orf3-219ENST00000488186 MAP4K1Q92918 833 aa18.65■□□□□ 0.58
C9orf3-219ENST00000488186 ZIC5Q96T25 663 aa18.65■□□□□ 0.58
C9orf3-219ENST00000488186 CFHR5Q9BXR6 569 aa18.65■□□□□ 0.58
C9orf3-219ENST00000488186 ROBO3Q96MS0 1386 aa18.65■□□□□ 0.58
C9orf3-219ENST00000488186 CXCL11O14625 94 aa18.64■□□□□ 0.57
C9orf3-219ENST00000488186 RANBP6O60518 1105 aaKnown RBP18.64■□□□□ 0.57
C9orf3-219ENST00000488186 REC8O95072 547 aa18.64■□□□□ 0.57
C9orf3-219ENST00000488186 CETPP11597 493 aa18.64■□□□□ 0.57
C9orf3-219ENST00000488186 RASA1P20936 1047 aa18.64■□□□□ 0.57
C9orf3-219ENST00000488186 GJA5P36382 358 aa18.64■□□□□ 0.57
C9orf3-219ENST00000488186 CTCFP49711 727 aaPredicted RBP18.64■□□□□ 0.57
C9orf3-219ENST00000488186 SPP2Q13103 211 aa18.64■□□□□ 0.57
C9orf3-219ENST00000488186 AKNAD1Q5T1N1 836 aa18.64■□□□□ 0.57
C9orf3-219ENST00000488186 CCDC84Q86UT8 332 aaPredicted RBP18.64■□□□□ 0.57
C9orf3-219ENST00000488186 ZNF280CQ8ND82 737 aa18.64■□□□□ 0.57
C9orf3-219ENST00000488186 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.64■□□□□ 0.57
C9orf3-219ENST00000488186 AFG3L2Q9Y4W6 797 aa18.64■□□□□ 0.57
C9orf3-219ENST00000488186 DOCK1Q14185 1865 aa18.63■□□□□ 0.57
C9orf3-219ENST00000488186 CCL15-CCL14A0A0B4J2E2 113 aa18.63■□□□□ 0.57
C9orf3-219ENST00000488186 TSPY2A6NKD2 308 aa18.63■□□□□ 0.57
C9orf3-219ENST00000488186 EIF5BO60841 1220 aaKnown RBP18.63■□□□□ 0.57
C9orf3-219ENST00000488186 ALDH1A1P00352 501 aa18.63■□□□□ 0.57
C9orf3-219ENST00000488186 PCP11498 1178 aaKnown RBP18.63■□□□□ 0.57
C9orf3-219ENST00000488186 JAG1P78504 1218 aa18.63■□□□□ 0.57
C9orf3-219ENST00000488186 TFAP4Q01664 338 aa18.63■□□□□ 0.57
C9orf3-219ENST00000488186 ATP2B2Q01814 1243 aa18.63■□□□□ 0.57
C9orf3-219ENST00000488186 SEPT2Q15019 361 aa18.63■□□□□ 0.57
C9orf3-219ENST00000488186 CCL15Q16663 113 aa18.63■□□□□ 0.57
C9orf3-219ENST00000488186 SHROOM1Q2M3G4 852 aaPredicted RBP18.63■□□□□ 0.57
C9orf3-219ENST00000488186 NOM1Q5C9Z4 860 aaKnown RBP18.63■□□□□ 0.57
C9orf3-219ENST00000488186 OTUD7BQ6GQQ9 843 aa18.63■□□□□ 0.57
C9orf3-219ENST00000488186 MS4A4AQ96JQ5 239 aa18.63■□□□□ 0.57
C9orf3-219ENST00000488186 FEZ1Q99689 392 aa18.63■□□□□ 0.57
C9orf3-219ENST00000488186 LSG1Q9H089 658 aaKnown RBP18.63■□□□□ 0.57
C9orf3-219ENST00000488186 INCENPQ9NQS7 918 aa18.63■□□□□ 0.57
C9orf3-219ENST00000488186 RBM8AQ9Y5S9 174 aaKnown RBP18.63■□□□□ 0.57
C9orf3-219ENST00000488186 TRDNQ13061 729 aa18.62■□□□□ 0.57
C9orf3-219ENST00000488186 FAM47AQ5JRC9 791 aa18.62■□□□□ 0.57
C9orf3-219ENST00000488186 STAG1Q8WVM7 1258 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms