RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 TP53INP1Q96A56 240 aa8.75□□□□□ -1.01
TMEM39A-209ENST00000486235 SLC52A2Q9HAB3 445 aa8.75□□□□□ -1.01
TMEM39A-209ENST00000486235 LGR6Q9HBX8 967 aa8.75□□□□□ -1.01
TMEM39A-209ENST00000486235 NARFQ9UHQ1 456 aa8.75□□□□□ -1.01
TMEM39A-209ENST00000486235 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.75□□□□□ -1.01
TMEM39A-209ENST00000486235 H0YIN7 160 aa8.74□□□□□ -1.01
TMEM39A-209ENST00000486235 RGS9O75916 674 aaPredicted RBP8.74□□□□□ -1.01
TMEM39A-209ENST00000486235 CANXP27824 592 aaKnown RBP8.74□□□□□ -1.01
TMEM39A-209ENST00000486235 AKAP4Q5JQC9 854 aa8.74□□□□□ -1.01
TMEM39A-209ENST00000486235 NBPF11Q86T75 865 aa8.74□□□□□ -1.01
TMEM39A-209ENST00000486235 ZNF622Q969S3 477 aaKnown RBP eCLIP8.74□□□□□ -1.01
TMEM39A-209ENST00000486235 LENG1Q96BZ8 264 aaPredicted RBP8.74□□□□□ -1.01
TMEM39A-209ENST00000486235 HINFPQ9BQA5 517 aa8.74□□□□□ -1.01
TMEM39A-209ENST00000486235 RNMTO43148 476 aaKnown RBP8.73□□□□□ -1.01
TMEM39A-209ENST00000486235 IL13P35225 146 aa8.73□□□□□ -1.01
TMEM39A-209ENST00000486235 CCINQ13939 588 aa8.73□□□□□ -1.01
TMEM39A-209ENST00000486235 TFIP11Q9UBB9 837 aaKnown RBP8.73□□□□□ -1.01
TMEM39A-209ENST00000486235 AFDNP55196 1824 aaKnown RBP8.73□□□□□ -1.01
TMEM39A-209ENST00000486235 TIAM2Q8IVF5 1701 aa8.72□□□□□ -1.01
TMEM39A-209ENST00000486235 HMOX1P09601 288 aa8.72□□□□□ -1.01
TMEM39A-209ENST00000486235 H2AFB1P0C5Y9 115 aa8.72□□□□□ -1.01
TMEM39A-209ENST00000486235 H2AFB2P0C5Z0 115 aa8.72□□□□□ -1.01
TMEM39A-209ENST00000486235 CPB1P15086 417 aa8.72□□□□□ -1.01
TMEM39A-209ENST00000486235 SEC13P55735 322 aa8.72□□□□□ -1.01
TMEM39A-209ENST00000486235 NRG1Q02297 640 aaPredicted RBP8.72□□□□□ -1.01
TMEM39A-209ENST00000486235 KRT25Q7Z3Z0 450 aa8.72□□□□□ -1.01
TMEM39A-209ENST00000486235 FAM35AQ86V20 835 aa8.72□□□□□ -1.01
TMEM39A-209ENST00000486235 FMR1NBQ8N0W7 255 aaPredicted RBP8.72□□□□□ -1.01
TMEM39A-209ENST00000486235 PCGF6Q9BYE7 350 aa8.72□□□□□ -1.01
TMEM39A-209ENST00000486235 SCN11AQ9UI33 1791 aa8.71□□□□□ -1.01
TMEM39A-209ENST00000486235 HIF1AQ16665 826 aa8.71□□□□□ -1.02
TMEM39A-209ENST00000486235 TBC1D9BQ66K14 1250 aa8.71□□□□□ -1.02
TMEM39A-209ENST00000486235 STAG2Q8N3U4 1231 aa8.71□□□□□ -1.02
TMEM39A-209ENST00000486235 KLK14Q9P0G3 267 aa8.71□□□□□ -1.02
TMEM39A-209ENST00000486235 NRXN2Q9P2S2 1712 aa8.71□□□□□ -1.02
TMEM39A-209ENST00000486235 DLEC1Q9Y238 1755 aa8.71□□□□□ -1.02
TMEM39A-209ENST00000486235 MRC1P22897 1456 aa8.7□□□□□ -1.02
TMEM39A-209ENST00000486235 FOXN1O15353 648 aa8.7□□□□□ -1.02
TMEM39A-209ENST00000486235 DDNO94850 711 aaPredicted RBP8.7□□□□□ -1.02
TMEM39A-209ENST00000486235 HSPA5P11021 654 aaKnown RBP8.7□□□□□ -1.02
TMEM39A-209ENST00000486235 MLLT1Q03111 559 aaPredicted RBP8.7□□□□□ -1.02
TMEM39A-209ENST00000486235 PLAURQ03405 335 aa8.7□□□□□ -1.02
TMEM39A-209ENST00000486235 MTHFSDQ2M296 383 aaKnown RBP8.7□□□□□ -1.02
TMEM39A-209ENST00000486235 PRR5LQ6MZQ0 368 aa8.7□□□□□ -1.02
TMEM39A-209ENST00000486235 TTC5Q8N0Z6 440 aa8.7□□□□□ -1.02
TMEM39A-209ENST00000486235 TAOK3Q9H2K8 898 aa8.7□□□□□ -1.02
TMEM39A-209ENST00000486235 CCDC88AQ3V6T2 1871 aa8.7□□□□□ -1.02
TMEM39A-209ENST00000486235 A0A087WZG4 1122 aa8.69□□□□□ -1.02
TMEM39A-209ENST00000486235 TGFBR3LH3BV60 316 aa8.69□□□□□ -1.02
TMEM39A-209ENST00000486235 NPHP1O15259 732 aa8.69□□□□□ -1.02
TMEM39A-209ENST00000486235 STARD3NLO95772 234 aa8.69□□□□□ -1.02
TMEM39A-209ENST00000486235 GRNP28799 593 aaKnown RBP8.69□□□□□ -1.02
TMEM39A-209ENST00000486235 PDE6BP35913 854 aa8.69□□□□□ -1.02
TMEM39A-209ENST00000486235 EIF5P55010 431 aaKnown RBP8.69□□□□□ -1.02
TMEM39A-209ENST00000486235 FLIIQ13045 1269 aa8.69□□□□□ -1.02
TMEM39A-209ENST00000486235 RTN1Q16799 776 aa8.69□□□□□ -1.02
TMEM39A-209ENST00000486235 BRIP1Q9BX63 1249 aa8.69□□□□□ -1.02
TMEM39A-209ENST00000486235 DMGDHQ9UI17 866 aaKnown RBP8.69□□□□□ -1.02
TMEM39A-209ENST00000486235 KNSTRNQ9Y448 316 aa8.69□□□□□ -1.02
TMEM39A-209ENST00000486235 NPM2Q86SE8 214 aaKnown RBP8.68□□□□□ -1.02
TMEM39A-209ENST00000486235 CNBD1Q8NA66 436 aa8.68□□□□□ -1.02
TMEM39A-209ENST00000486235 ZNF496Q96IT1 587 aaPredicted RBP8.68□□□□□ -1.02
TMEM39A-209ENST00000486235 ZFATQ9P243 1243 aa8.68□□□□□ -1.02
TMEM39A-209ENST00000486235 CNTNAP1P78357 1384 aa8.68□□□□□ -1.02
TMEM39A-209ENST00000486235 PCNTO95613 3336 aa8.68□□□□□ -1.02
TMEM39A-209ENST00000486235 COL11A2P13942 1736 aaPredicted RBP8.68□□□□□ -1.02
TMEM39A-209ENST00000486235 ANKRD31Q8N7Z5 1873 aa8.68□□□□□ -1.02
TMEM39A-209ENST00000486235 ZBTB42B2RXF5 422 aa8.67□□□□□ -1.02
TMEM39A-209ENST00000486235 HYAL3O43820 417 aaPredicted RBP8.67□□□□□ -1.02
TMEM39A-209ENST00000486235 TARSP26639 723 aaKnown RBP8.67□□□□□ -1.02
TMEM39A-209ENST00000486235 IREB2P48200 963 aaKnown RBP8.67□□□□□ -1.02
TMEM39A-209ENST00000486235 IDH3AP50213 366 aa8.67□□□□□ -1.02
TMEM39A-209ENST00000486235 DPYDQ12882 1025 aa8.67□□□□□ -1.02
TMEM39A-209ENST00000486235 CRTC2Q53ET0 693 aaPredicted RBP8.67□□□□□ -1.02
TMEM39A-209ENST00000486235 EAPPQ56P03 285 aaPredicted RBP8.67□□□□□ -1.02
TMEM39A-209ENST00000486235 PERM1Q5SV97 790 aa8.67□□□□□ -1.02
TMEM39A-209ENST00000486235 IER5Q5VY09 327 aa8.67□□□□□ -1.02
TMEM39A-209ENST00000486235 PRPF40BQ6NWY9 871 aaKnown RBP8.67□□□□□ -1.02
TMEM39A-209ENST00000486235 GLMNQ92990 594 aa8.67□□□□□ -1.02
TMEM39A-209ENST00000486235 SSBP4Q9BWG4 385 aaPredicted RBP8.67□□□□□ -1.02
TMEM39A-209ENST00000486235 EFCC1Q9HA90 598 aa8.67□□□□□ -1.02
TMEM39A-209ENST00000486235 LTBP3Q9NS15 1303 aa8.67□□□□□ -1.02
TMEM39A-209ENST00000486235 MAFBQ9Y5Q3 323 aaPredicted RBP8.67□□□□□ -1.02
TMEM39A-209ENST00000486235 HEG1Q9ULI3 1381 aa8.66□□□□□ -1.02
TMEM39A-209ENST00000486235 PASKQ96RG2 1323 aa8.66□□□□□ -1.02
TMEM39A-209ENST00000486235 SASH3O75995 380 aa8.66□□□□□ -1.02
TMEM39A-209ENST00000486235 A1BGP04217 495 aa8.66□□□□□ -1.02
TMEM39A-209ENST00000486235 PIP4K2AP48426 406 aaPredicted RBP8.66□□□□□ -1.02
TMEM39A-209ENST00000486235 CTCFP49711 727 aaPredicted RBP8.66□□□□□ -1.02
TMEM39A-209ENST00000486235 ST5P78524 1137 aa8.66□□□□□ -1.02
TMEM39A-209ENST00000486235 LRP8Q14114 963 aa8.66□□□□□ -1.02
TMEM39A-209ENST00000486235 STYK1Q6J9G0 422 aa8.66□□□□□ -1.02
TMEM39A-209ENST00000486235 ELMSAN1Q6PJG2 1045 aa8.66□□□□□ -1.02
TMEM39A-209ENST00000486235 HFE2Q6ZVN8 426 aa8.66□□□□□ -1.02
TMEM39A-209ENST00000486235 LDHDQ86WU2 507 aa8.66□□□□□ -1.02
TMEM39A-209ENST00000486235 WFDC12Q8WWY7 111 aa8.66□□□□□ -1.02
TMEM39A-209ENST00000486235 CLUAP1Q96AJ1 413 aa8.66□□□□□ -1.02
TMEM39A-209ENST00000486235 SETDB2Q96T68 719 aa8.66□□□□□ -1.02
TMEM39A-209ENST00000486235 LPIN3Q9BQK8 851 aa8.66□□□□□ -1.02
TMEM39A-209ENST00000486235 TAF1DQ9H5J8 278 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms