RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 ZSCAN10Q96SZ4 725 aaPredicted RBP7.19□□□□□ -1.26
NHLRC3-205ENST00000485407 RSRP1Q9BUV0 290 aa7.19□□□□□ -1.26
NHLRC3-205ENST00000485407 GINM1Q9NU53 330 aa7.19□□□□□ -1.26
NHLRC3-205ENST00000485407 PPP4R2Q9NY27 417 aa7.19□□□□□ -1.26
NHLRC3-205ENST00000485407 SNTG2Q9NY99 539 aa7.19□□□□□ -1.26
NHLRC3-205ENST00000485407 STRIP2Q9ULQ0 834 aa7.19□□□□□ -1.26
NHLRC3-205ENST00000485407 NUDCQ9Y266 331 aa7.19□□□□□ -1.26
NHLRC3-205ENST00000485407 USP20Q9Y2K6 914 aa7.19□□□□□ -1.26
NHLRC3-205ENST00000485407 KDRP35968 1356 aa7.19□□□□□ -1.26
NHLRC3-205ENST00000485407 TGFBR3LH3BV60 316 aa7.18□□□□□ -1.26
NHLRC3-205ENST00000485407 ZIC2O95409 532 aaPredicted RBP7.18□□□□□ -1.26
NHLRC3-205ENST00000485407 PARNO95453 639 aaKnown RBP7.18□□□□□ -1.26
NHLRC3-205ENST00000485407 EIF4A3P38919 411 aaKnown RBP7.18□□□□□ -1.26
NHLRC3-205ENST00000485407 RAB33AQ14088 237 aa7.18□□□□□ -1.26
NHLRC3-205ENST00000485407 CCDC85BQ15834 202 aaPredicted RBP7.18□□□□□ -1.26
NHLRC3-205ENST00000485407 AMOTQ4VCS5 1084 aa7.18□□□□□ -1.26
NHLRC3-205ENST00000485407 PDE12Q6L8Q7 609 aaKnown RBP7.18□□□□□ -1.26
NHLRC3-205ENST00000485407 XKR5Q6UX68 686 aa7.18□□□□□ -1.26
NHLRC3-205ENST00000485407 ZNF295-AS1Q8N0V1 137 aa7.18□□□□□ -1.26
NHLRC3-205ENST00000485407 ANAPC16Q96DE5 110 aa7.18□□□□□ -1.26
NHLRC3-205ENST00000485407 ELP3Q9H9T3 547 aa7.18□□□□□ -1.26
NHLRC3-205ENST00000485407 SUGT1Q9Y2Z0 365 aa7.18□□□□□ -1.26
NHLRC3-205ENST00000485407 LRRC37A3O60309 1634 aa7.18□□□□□ -1.26
NHLRC3-205ENST00000485407 KLF4O43474 513 aa7.17□□□□□ -1.26
NHLRC3-205ENST00000485407 WIPF1O43516 503 aa7.17□□□□□ -1.26
NHLRC3-205ENST00000485407 CDC45O75419 566 aa7.17□□□□□ -1.26
NHLRC3-205ENST00000485407 RGS19P49795 217 aa7.17□□□□□ -1.26
NHLRC3-205ENST00000485407 IDH3AP50213 366 aa7.17□□□□□ -1.26
NHLRC3-205ENST00000485407 PLEKHG4Q58EX7 1191 aa7.17□□□□□ -1.26
NHLRC3-205ENST00000485407 MARCH10Q8NA82 808 aaPredicted RBP7.17□□□□□ -1.26
NHLRC3-205ENST00000485407 SLC16A10Q8TF71 515 aa7.17□□□□□ -1.26
NHLRC3-205ENST00000485407 ZNF296Q8WUU4 475 aaPredicted RBP7.17□□□□□ -1.26
NHLRC3-205ENST00000485407 AIDAQ96BJ3 306 aa7.17□□□□□ -1.26
NHLRC3-205ENST00000485407 ITPKCQ96DU7 683 aa7.17□□□□□ -1.26
NHLRC3-205ENST00000485407 PSMD1Q99460 953 aa7.17□□□□□ -1.26
NHLRC3-205ENST00000485407 PRKRIP1Q9H875 184 aaPredicted RBP7.17□□□□□ -1.26
NHLRC3-205ENST00000485407 ZFAND3Q9H8U3 227 aa7.17□□□□□ -1.26
NHLRC3-205ENST00000485407 MYBBP1AQ9BQG0 1328 aaKnown RBP7.17□□□□□ -1.26
NHLRC3-205ENST00000485407 PCDH11XQ9BZA7 1347 aa7.17□□□□□ -1.26
NHLRC3-205ENST00000485407 PCDH11YQ9BZA8 1340 aa7.17□□□□□ -1.26
NHLRC3-205ENST00000485407 MEGF6O75095 1541 aa7.17□□□□□ -1.26
NHLRC3-205ENST00000485407 SBF2Q86WG5 1849 aa7.16□□□□□ -1.26
NHLRC3-205ENST00000485407 FAM221BA6H8Z2 402 aa7.16□□□□□ -1.26
NHLRC3-205ENST00000485407 HSP90AB1P08238 724 aaKnown RBP7.16□□□□□ -1.26
NHLRC3-205ENST00000485407 HMGB2P26583 209 aaKnown RBP7.16□□□□□ -1.26
NHLRC3-205ENST00000485407 PLA2G4AP47712 749 aa7.16□□□□□ -1.26
NHLRC3-205ENST00000485407 FSTL1Q12841 308 aa7.16□□□□□ -1.26
NHLRC3-205ENST00000485407 CBLBQ13191 982 aa7.16□□□□□ -1.26
NHLRC3-205ENST00000485407 GRM2Q14416 872 aa7.16□□□□□ -1.26
NHLRC3-205ENST00000485407 PLEKHO1Q53GL0 409 aaPredicted RBP7.16□□□□□ -1.26
NHLRC3-205ENST00000485407 SULT6B1Q6IMI4 303 aa7.16□□□□□ -1.26
NHLRC3-205ENST00000485407 PTF1AQ7RTS3 328 aa7.16□□□□□ -1.26
NHLRC3-205ENST00000485407 GALNT12Q8IXK2 581 aa7.16□□□□□ -1.26
NHLRC3-205ENST00000485407 RHBDD1Q8TEB9 315 aa7.16□□□□□ -1.26
NHLRC3-205ENST00000485407 SH3TC2Q8TF17 1288 aa7.16□□□□□ -1.26
NHLRC3-205ENST00000485407 EAF1Q96JC9 268 aaPredicted RBP7.16□□□□□ -1.26
NHLRC3-205ENST00000485407 SUSD3Q96L08 255 aa7.16□□□□□ -1.26
NHLRC3-205ENST00000485407 TMEM74Q96NL1 305 aa7.16□□□□□ -1.26
NHLRC3-205ENST00000485407 PNNQ9H307 717 aaKnown RBP7.16□□□□□ -1.26
NHLRC3-205ENST00000485407 SUV39H2Q9H5I1 410 aa7.16□□□□□ -1.26
NHLRC3-205ENST00000485407 FANCLQ9NW38 375 aa7.16□□□□□ -1.26
NHLRC3-205ENST00000485407 TMEM63CQ9P1W3 806 aa7.16□□□□□ -1.26
NHLRC3-205ENST00000485407 NXF1Q9UBU9 619 aaKnown RBP7.16□□□□□ -1.26
NHLRC3-205ENST00000485407 RTCBQ9Y3I0 505 aaKnown RBP7.16□□□□□ -1.26
NHLRC3-205ENST00000485407 PRKAB1Q9Y478 270 aa7.16□□□□□ -1.26
NHLRC3-205ENST00000485407 COL3A1P02461 1466 aaPredicted RBP7.16□□□□□ -1.26
NHLRC3-205ENST00000485407 PDE4DIPQ5VU43 2346 aa7.16□□□□□ -1.26
NHLRC3-205ENST00000485407 PKD1L3Q7Z443 1732 aa7.15□□□□□ -1.26
NHLRC3-205ENST00000485407 PTGIRP43119 386 aa7.15□□□□□ -1.26
NHLRC3-205ENST00000485407 SOX9P48436 509 aa7.15□□□□□ -1.26
NHLRC3-205ENST00000485407 ARSDP51689 593 aa7.15□□□□□ -1.26
NHLRC3-205ENST00000485407 CNGB1Q14028 1251 aaPredicted RBP7.15□□□□□ -1.26
NHLRC3-205ENST00000485407 SCARF1Q14162 830 aa7.15□□□□□ -1.26
NHLRC3-205ENST00000485407 MAP3K11Q16584 847 aa7.15□□□□□ -1.26
NHLRC3-205ENST00000485407 PLEKHG6Q3KR16 790 aa7.15□□□□□ -1.26
NHLRC3-205ENST00000485407 GNASQ5JWF2 1037 aa7.15□□□□□ -1.26
NHLRC3-205ENST00000485407 NBPF10Q6P3W6 841 aaKnown RBP7.15□□□□□ -1.26
NHLRC3-205ENST00000485407 IFNL2Q8IZJ0 200 aa7.15□□□□□ -1.26
NHLRC3-205ENST00000485407 USHBP1Q8N6Y0 703 aa7.15□□□□□ -1.26
NHLRC3-205ENST00000485407 ZNF280CQ8ND82 737 aa7.15□□□□□ -1.26
NHLRC3-205ENST00000485407 DDX54Q8TDD1 881 aaKnown RBP7.15□□□□□ -1.26
NHLRC3-205ENST00000485407 TRIM56Q9BRZ2 755 aaKnown RBP7.15□□□□□ -1.26
NHLRC3-205ENST00000485407 CHPF2Q9P2E5 772 aa7.15□□□□□ -1.26
NHLRC3-205ENST00000485407 COL24A1Q17RW2 1714 aa7.15□□□□□ -1.27
NHLRC3-205ENST00000485407 CYP27B1O15528 508 aa7.14□□□□□ -1.27
NHLRC3-205ENST00000485407 ANP32CO43423 234 aa7.14□□□□□ -1.27
NHLRC3-205ENST00000485407 COL9A2Q14055 689 aaPredicted RBP7.14□□□□□ -1.27
NHLRC3-205ENST00000485407 RASA3Q14644 834 aa7.14□□□□□ -1.27
NHLRC3-205ENST00000485407 KDF1Q8NAX2 398 aaPredicted RBP7.14□□□□□ -1.27
NHLRC3-205ENST00000485407 APPBP2Q92624 585 aa7.14□□□□□ -1.27
NHLRC3-205ENST00000485407 EHD4Q9H223 541 aa7.14□□□□□ -1.27
NHLRC3-205ENST00000485407 PRDM10Q9NQV6 1147 aa7.14□□□□□ -1.27
NHLRC3-205ENST00000485407 DDX56Q9NY93 547 aaKnown RBP7.14□□□□□ -1.27
NHLRC3-205ENST00000485407 PRKAG3Q9UGI9 489 aa7.14□□□□□ -1.27
NHLRC3-205ENST00000485407 G3BP2Q9UN86 482 aaKnown RBP7.14□□□□□ -1.27
NHLRC3-205ENST00000485407 EREGO14944 169 aa7.13□□□□□ -1.27
NHLRC3-205ENST00000485407 S100BP04271 92 aaPredicted RBP7.13□□□□□ -1.27
NHLRC3-205ENST00000485407 U2AF1L5P0DN76 240 aaPredicted RBP7.13□□□□□ -1.27
NHLRC3-205ENST00000485407 RLBP1P12271 317 aa7.13□□□□□ -1.27
NHLRC3-205ENST00000485407 PHKG2P15735 406 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms