RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 GOLIM4O00461 696 aa8.3□□□□□ -1.08
BRCA1-216ENST00000484087 PPP1R12BO60237 982 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-216ENST00000484087 TBC1D8O95759 1140 aa8.3□□□□□ -1.08
BRCA1-216ENST00000484087 HOXB3P14651 431 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-216ENST00000484087 CHMLP26374 656 aa8.3□□□□□ -1.08
BRCA1-216ENST00000484087 CTCFP49711 727 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-216ENST00000484087 MAP3K11Q16584 847 aa8.3□□□□□ -1.08
BRCA1-216ENST00000484087 SHROOM1Q2M3G4 852 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-216ENST00000484087 SUPT20HL1Q3ZLR7 823 aa8.3□□□□□ -1.08
BRCA1-216ENST00000484087 SPRYD7Q5W111 196 aa8.3□□□□□ -1.08
BRCA1-216ENST00000484087 NAA16Q6N069 864 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-216ENST00000484087 KIAA1211Q6ZU35 1233 aa8.3□□□□□ -1.08
BRCA1-216ENST00000484087 MAPKAPK5Q8IW41 473 aa8.3□□□□□ -1.08
BRCA1-216ENST00000484087 MAGEB6Q8N7X4 407 aa8.3□□□□□ -1.08
BRCA1-216ENST00000484087 IL27Q8NEV9 243 aa8.3□□□□□ -1.08
BRCA1-216ENST00000484087 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.3□□□□□ -1.08
BRCA1-216ENST00000484087 FAM151AQ8WW52 585 aa8.3□□□□□ -1.08
BRCA1-216ENST00000484087 SNX21Q969T3 373 aa8.3□□□□□ -1.08
BRCA1-216ENST00000484087 CCDC102AQ96A19 550 aa8.3□□□□□ -1.08
BRCA1-216ENST00000484087 EVI5LQ96CN4 794 aa8.3□□□□□ -1.08
BRCA1-216ENST00000484087 OPTNQ96CV9 577 aa8.3□□□□□ -1.08
BRCA1-216ENST00000484087 ESYT1Q9BSJ8 1104 aa8.3□□□□□ -1.08
BRCA1-216ENST00000484087 BEGAINQ9BUH8 593 aa8.3□□□□□ -1.08
BRCA1-216ENST00000484087 TBC1D2Q9BYX2 928 aa8.3□□□□□ -1.08
BRCA1-216ENST00000484087 BOLA2Q9H3K6 86 aa8.3□□□□□ -1.08
BRCA1-216ENST00000484087 DIAPH3Q9NSV4 1193 aa8.3□□□□□ -1.08
BRCA1-216ENST00000484087 SNCAIPQ9Y6H5 919 aa8.3□□□□□ -1.08
BRCA1-216ENST00000484087 RPAP1Q9BWH6 1393 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-216ENST00000484087 GPR75-ASB3A0A0A6YYF3 556 aa8.29□□□□□ -1.08
BRCA1-216ENST00000484087 MAP4K4O95819 1239 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-216ENST00000484087 IREB2P48200 963 aaKnown RBP8.29□□□□□ -1.08
BRCA1-216ENST00000484087 SPTY2D1Q68D10 685 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-216ENST00000484087 FAM83AQ86UY5 434 aa8.29□□□□□ -1.08
BRCA1-216ENST00000484087 ZSCAN29Q8IWY8 852 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-216ENST00000484087 TEX11Q8IYF3 940 aa8.29□□□□□ -1.08
BRCA1-216ENST00000484087 ANKRD13AQ8IZ07 590 aa8.29□□□□□ -1.08
BRCA1-216ENST00000484087 TNS4Q8IZW8 715 aa8.29□□□□□ -1.08
BRCA1-216ENST00000484087 RNF166Q96A37 237 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-216ENST00000484087 SLC10A4Q96EP9 437 aa8.29□□□□□ -1.08
BRCA1-216ENST00000484087 MRIQ9BWK5 157 aa8.29□□□□□ -1.08
BRCA1-216ENST00000484087 ANO2Q9NQ90 1003 aa8.29□□□□□ -1.08
BRCA1-216ENST00000484087 SAP30BPQ9UHR5 308 aaKnown RBP8.29□□□□□ -1.08
BRCA1-216ENST00000484087 BOLA1Q9Y3E2 137 aa8.29□□□□□ -1.08
BRCA1-216ENST00000484087 HSP90AA1P07900 732 aaKnown RBP8.28□□□□□ -1.08
BRCA1-216ENST00000484087 CYP7A1P22680 504 aa8.28□□□□□ -1.08
BRCA1-216ENST00000484087 DGKZQ13574 1117 aa8.28□□□□□ -1.08
BRCA1-216ENST00000484087 RRP1BQ14684 758 aaKnown RBP8.28□□□□□ -1.08
BRCA1-216ENST00000484087 TGFBRAP1Q8WUH2 860 aa8.28□□□□□ -1.08
BRCA1-216ENST00000484087 PTPN18Q99952 460 aa8.28□□□□□ -1.08
BRCA1-216ENST00000484087 FLT1P17948 1338 aa8.28□□□□□ -1.08
BRCA1-216ENST00000484087 MYH8P13535 1937 aa8.27□□□□□ -1.09
BRCA1-216ENST00000484087 SMIM22K7EJ46 135 aa8.27□□□□□ -1.09
BRCA1-216ENST00000484087 ATP5JP18859 108 aa8.27□□□□□ -1.09
BRCA1-216ENST00000484087 ANAPC15P60006 121 aa8.27□□□□□ -1.09
BRCA1-216ENST00000484087 MAP3K9P80192 1104 aa8.27□□□□□ -1.09
BRCA1-216ENST00000484087 ZNF512BQ96KM6 892 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-216ENST00000484087 IDI2Q9BXS1 227 aa8.27□□□□□ -1.09
BRCA1-216ENST00000484087 OSBPL5Q9H0X9 879 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-216ENST00000484087 ZNF532Q9HCE3 1301 aa8.27□□□□□ -1.09
BRCA1-216ENST00000484087 IRF6O14896 467 aa8.26□□□□□ -1.09
BRCA1-216ENST00000484087 PDE6AP16499 860 aa8.26□□□□□ -1.09
BRCA1-216ENST00000484087 GSTO1P78417 241 aa8.26□□□□□ -1.09
BRCA1-216ENST00000484087 JAG1P78504 1218 aa8.26□□□□□ -1.09
BRCA1-216ENST00000484087 CAP1Q01518 475 aa8.26□□□□□ -1.09
BRCA1-216ENST00000484087 FKBP1CQ5VVH2 108 aa8.26□□□□□ -1.09
BRCA1-216ENST00000484087 FAM43AQ8N2R8 423 aa8.26□□□□□ -1.09
BRCA1-216ENST00000484087 LCORLQ8N3X6 602 aa8.26□□□□□ -1.09
BRCA1-216ENST00000484087 BRI3BPQ8WY22 251 aa8.26□□□□□ -1.09
BRCA1-216ENST00000484087 FSD1Q9BTV5 496 aa8.26□□□□□ -1.09
BRCA1-216ENST00000484087 ZNF341Q9BYN7 854 aa8.26□□□□□ -1.09
BRCA1-216ENST00000484087 DNAJC18Q9H819 358 aa8.26□□□□□ -1.09
BRCA1-216ENST00000484087 PALD1Q9ULE6 856 aa8.26□□□□□ -1.09
BRCA1-216ENST00000484087 CSADQ9Y600 493 aa8.26□□□□□ -1.09
BRCA1-216ENST00000484087 RAD50Q92878 1312 aa8.26□□□□□ -1.09
BRCA1-216ENST00000484087 CCL15-CCL14A0A0B4J2E2 113 aa8.26□□□□□ -1.09
BRCA1-216ENST00000484087 SPDYE5A6NIY4 337 aa8.26□□□□□ -1.09
BRCA1-216ENST00000484087 PHF20L1A8MW92 1017 aa8.26□□□□□ -1.09
BRCA1-216ENST00000484087 K7ELQ4 463 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-216ENST00000484087 SGSM2O43147 1006 aa8.26□□□□□ -1.09
BRCA1-216ENST00000484087 PRKAB2O43741 272 aa8.26□□□□□ -1.09
BRCA1-216ENST00000484087 ENTPD3O75355 529 aa8.26□□□□□ -1.09
BRCA1-216ENST00000484087 HOXB1P14653 301 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-216ENST00000484087 MCM2P49736 904 aa8.26□□□□□ -1.09
BRCA1-216ENST00000484087 CCL15Q16663 113 aa8.26□□□□□ -1.09
BRCA1-216ENST00000484087 LRRFIP1Q32MZ4 808 aaKnown RBP8.26□□□□□ -1.09
BRCA1-216ENST00000484087 SLC9C2Q5TAH2 1124 aa8.26□□□□□ -1.09
BRCA1-216ENST00000484087 CWC27Q6UX04 472 aaKnown RBP8.26□□□□□ -1.09
BRCA1-216ENST00000484087 TICAM2Q86XR7 235 aa8.26□□□□□ -1.09
BRCA1-216ENST00000484087 SLF2Q8IX21 1173 aa8.26□□□□□ -1.09
BRCA1-216ENST00000484087 SDR42E1Q8WUS8 393 aa8.26□□□□□ -1.09
BRCA1-216ENST00000484087 MS4A4AQ96JQ5 239 aa8.26□□□□□ -1.09
BRCA1-216ENST00000484087 SLKQ9H2G2 1235 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-216ENST00000484087 ARMT1Q9H993 441 aa8.26□□□□□ -1.09
BRCA1-216ENST00000484087 PRDM10Q9NQV6 1147 aa8.26□□□□□ -1.09
BRCA1-216ENST00000484087 PAG1Q9NWQ8 432 aa8.26□□□□□ -1.09
BRCA1-216ENST00000484087 LOC285556D6RIA3 1793 aa8.25□□□□□ -1.09
BRCA1-216ENST00000484087 TCRBV5S4A2TA0A5A2 114 aa8.25□□□□□ -1.09
BRCA1-216ENST00000484087 GDF11O95390 407 aa8.25□□□□□ -1.09
BRCA1-216ENST00000484087 LDHCP07864 332 aa8.25□□□□□ -1.09
BRCA1-216ENST00000484087 ZBTB48P10074 688 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms