RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 PARP4Q9UKK3 1724 aaKnown RBP14.13□□□□□ -0.15
CCDC78-213ENST00000482878 WDR17Q8IZU2 1322 aa14.13□□□□□ -0.15
CCDC78-213ENST00000482878 VWA3AA6NCI4 1184 aa14.13□□□□□ -0.15
CCDC78-213ENST00000482878 PDE6AP16499 860 aa14.13□□□□□ -0.15
CCDC78-213ENST00000482878 GUCY1A2P33402 732 aa14.13□□□□□ -0.15
CCDC78-213ENST00000482878 PHKA1P46020 1223 aa14.13□□□□□ -0.15
CCDC78-213ENST00000482878 KIF6Q6ZMV9 814 aa14.13□□□□□ -0.15
CCDC78-213ENST00000482878 PARP3Q9Y6F1 533 aa14.13□□□□□ -0.15
CCDC78-213ENST00000482878 BTBD18B2RXH4 712 aa14.12□□□□□ -0.15
CCDC78-213ENST00000482878 MAP2K2P36507 400 aa14.12□□□□□ -0.15
CCDC78-213ENST00000482878 BRINP3Q76B58 766 aa14.12□□□□□ -0.15
CCDC78-213ENST00000482878 SGMS1Q86VZ5 419 aa14.12□□□□□ -0.15
CCDC78-213ENST00000482878 VGLL2Q8N8G2 317 aa14.12□□□□□ -0.15
CCDC78-213ENST00000482878 TACC3Q9Y6A5 838 aa14.12□□□□□ -0.15
CCDC78-213ENST00000482878 TNS2Q63HR2 1409 aa14.12□□□□□ -0.15
CCDC78-213ENST00000482878 TOB1P50616 345 aaPredicted RBP14.12□□□□□ -0.15
CCDC78-213ENST00000482878 FMR1Q06787 632 aaKnown RBP eCLIP14.12□□□□□ -0.15
CCDC78-213ENST00000482878 HLFQ16534 295 aa14.12□□□□□ -0.15
CCDC78-213ENST00000482878 MCTP2Q6DN12 878 aa14.12□□□□□ -0.15
CCDC78-213ENST00000482878 KRI1Q8N9T8 703 aaKnown RBP14.12□□□□□ -0.15
CCDC78-213ENST00000482878 STRBPQ96SI9 672 aaKnown RBP14.12□□□□□ -0.15
CCDC78-213ENST00000482878 ZSWIM5Q9P217 1185 aa14.12□□□□□ -0.15
CCDC78-213ENST00000482878 FAN1Q9Y2M0 1017 aa14.12□□□□□ -0.15
CCDC78-213ENST00000482878 PPP2R2CQ9Y2T4 447 aa14.12□□□□□ -0.15
CCDC78-213ENST00000482878 ATRNO75882 1429 aa14.12□□□□□ -0.15
CCDC78-213ENST00000482878 TCRBV5S4A2TA0A5A2 114 aa14.11□□□□□ -0.15
CCDC78-213ENST00000482878 EIF3JO75822 258 aaKnown RBP14.11□□□□□ -0.15
CCDC78-213ENST00000482878 TTF1Q15361 905 aaPredicted RBP14.11□□□□□ -0.15
CCDC78-213ENST00000482878 FAM212AQ96EL1 285 aa14.11□□□□□ -0.15
CCDC78-213ENST00000482878 MAN1B1Q9UKM7 699 aa14.11□□□□□ -0.15
CCDC78-213ENST00000482878 UBR2Q8IWV8 1755 aa14.11□□□□□ -0.15
CCDC78-213ENST00000482878 TDO2P48775 406 aa14.11□□□□□ -0.15
CCDC78-213ENST00000482878 CTDSPL2Q05D32 466 aa14.11□□□□□ -0.15
CCDC78-213ENST00000482878 ZNF827Q17R98 1081 aa14.11□□□□□ -0.15
CCDC78-213ENST00000482878 NOSTRINQ8IVI9 506 aa14.11□□□□□ -0.15
CCDC78-213ENST00000482878 CNPY4Q8N129 248 aa14.11□□□□□ -0.15
CCDC78-213ENST00000482878 ZNF512BQ96KM6 892 aaPredicted RBP14.11□□□□□ -0.15
CCDC78-213ENST00000482878 FUT8Q9BYC5 575 aa14.11□□□□□ -0.15
CCDC78-213ENST00000482878 EPB41L4AQ9HCS5 686 aaPredicted RBP14.11□□□□□ -0.15
CCDC78-213ENST00000482878 KCNJ14Q9UNX9 436 aa14.11□□□□□ -0.15
CCDC78-213ENST00000482878 ARHGAP6O43182 974 aa14.11□□□□□ -0.15
CCDC78-213ENST00000482878 SSRP1Q08945 709 aaKnown RBP14.11□□□□□ -0.15
CCDC78-213ENST00000482878 TBX2Q13207 712 aaPredicted RBP14.11□□□□□ -0.15
CCDC78-213ENST00000482878 CCDC24Q8N4L8 307 aa14.11□□□□□ -0.15
CCDC78-213ENST00000482878 AIDAQ96BJ3 306 aa14.11□□□□□ -0.15
CCDC78-213ENST00000482878 PSD3Q9NYI0 1048 aa14.11□□□□□ -0.15
CCDC78-213ENST00000482878 TRMT112Q9UI30 125 aaKnown RBP14.11□□□□□ -0.15
CCDC78-213ENST00000482878 SLC12A7Q9Y666 1083 aa14.11□□□□□ -0.15
CCDC78-213ENST00000482878 IFIT3O14879 490 aaKnown RBP14.1□□□□□ -0.15
CCDC78-213ENST00000482878 TRMT44Q8IYL2 757 aaKnown RBP14.1□□□□□ -0.15
CCDC78-213ENST00000482878 PDILTQ8N807 584 aa14.1□□□□□ -0.15
CCDC78-213ENST00000482878 WDR24Q96S15 920 aa14.1□□□□□ -0.15
CCDC78-213ENST00000482878 SNAP23O00161 211 aa14.1□□□□□ -0.15
CCDC78-213ENST00000482878 ZSCAN12O43309 604 aa14.1□□□□□ -0.15
CCDC78-213ENST00000482878 ADKP55263 362 aaKnown RBP14.1□□□□□ -0.15
CCDC78-213ENST00000482878 NLRP10Q86W26 655 aa14.1□□□□□ -0.15
CCDC78-213ENST00000482878 FCHSD1Q86WN1 690 aa14.1□□□□□ -0.15
CCDC78-213ENST00000482878 GRAMD1CQ8IYS0 662 aa14.1□□□□□ -0.15
CCDC78-213ENST00000482878 GOLGA1Q92805 767 aa14.1□□□□□ -0.15
CCDC78-213ENST00000482878 BAG1Q99933 345 aaPredicted RBP14.1□□□□□ -0.15
CCDC78-213ENST00000482878 NFE2L3Q9Y4A8 694 aa14.1□□□□□ -0.15
CCDC78-213ENST00000482878 ANKRD18BA2A2Z9 1011 aa14.1□□□□□ -0.15
CCDC78-213ENST00000482878 POLR2DO15514 142 aaKnown RBP14.1□□□□□ -0.15
CCDC78-213ENST00000482878 MYO1BO43795 1136 aa14.1□□□□□ -0.15
CCDC78-213ENST00000482878 PDE8BO95263 885 aa14.1□□□□□ -0.15
CCDC78-213ENST00000482878 FMNL1O95466 1100 aaPredicted RBP14.1□□□□□ -0.15
CCDC78-213ENST00000482878 CTSWP56202 376 aa14.1□□□□□ -0.15
CCDC78-213ENST00000482878 POSTNQ15063 836 aa14.1□□□□□ -0.15
CCDC78-213ENST00000482878 JAKMIP3Q5VZ66 844 aa14.1□□□□□ -0.15
CCDC78-213ENST00000482878 MMS22LQ6ZRQ5 1243 aa14.1□□□□□ -0.15
CCDC78-213ENST00000482878 TOGARAM2Q6ZUX3 1019 aa14.1□□□□□ -0.15
CCDC78-213ENST00000482878 DIS3L2Q8IYB7 885 aaKnown RBP14.1□□□□□ -0.15
CCDC78-213ENST00000482878 CCDC82Q8N4S0 544 aa14.1□□□□□ -0.15
CCDC78-213ENST00000482878 MED15Q96RN5 788 aa14.1□□□□□ -0.15
CCDC78-213ENST00000482878 KCNG1Q9UIX4 513 aa14.1□□□□□ -0.15
CCDC78-213ENST00000482878 FBXO2Q9UK22 296 aaPredicted RBP14.1□□□□□ -0.15
CCDC78-213ENST00000482878 LIFRP42702 1097 aa14.09□□□□□ -0.15
CCDC78-213ENST00000482878 RRP12Q5JTH9 1297 aaKnown RBP14.09□□□□□ -0.15
CCDC78-213ENST00000482878 CMTR1Q8N1G2 835 aaKnown RBP14.09□□□□□ -0.15
CCDC78-213ENST00000482878 TC2NQ8N9U0 490 aa14.09□□□□□ -0.15
CCDC78-213ENST00000482878 SERTAD1Q9UHV2 236 aa14.09□□□□□ -0.15
CCDC78-213ENST00000482878 MMP1P03956 469 aa14.09□□□□□ -0.15
CCDC78-213ENST00000482878 ZNF18P17022 549 aa14.09□□□□□ -0.15
CCDC78-213ENST00000482878 ATP6V1AP38606 617 aa14.09□□□□□ -0.15
CCDC78-213ENST00000482878 WWC2Q6AWC2 1192 aa14.09□□□□□ -0.15
CCDC78-213ENST00000482878 GIGYF2Q6Y7W6 1299 aaKnown RBP14.09□□□□□ -0.15
CCDC78-213ENST00000482878 SMIM5Q71RC9 77 aa14.09□□□□□ -0.15
CCDC78-213ENST00000482878 IFNL3Q8IZI9 196 aa14.09□□□□□ -0.15
CCDC78-213ENST00000482878 ZKSCAN3Q9BRR0 538 aa14.09□□□□□ -0.15
CCDC78-213ENST00000482878 UBXN6Q9BZV1 441 aa14.09□□□□□ -0.15
CCDC78-213ENST00000482878 PUF60Q9UHX1 559 aaKnown RBP14.09□□□□□ -0.15
CCDC78-213ENST00000482878 N4BP1O75113 896 aaKnown RBP14.09□□□□□ -0.15
CCDC78-213ENST00000482878 PTPREP23469 700 aa14.09□□□□□ -0.15
CCDC78-213ENST00000482878 SUFUQ9UMX1 484 aa14.09□□□□□ -0.15
CCDC78-213ENST00000482878 MAP3K15Q6ZN16 1313 aa14.08□□□□□ -0.15
CCDC78-213ENST00000482878 CDHR2Q9BYE9 1310 aa14.08□□□□□ -0.15
CCDC78-213ENST00000482878 STK36Q9NRP7 1315 aa14.08□□□□□ -0.15
CCDC78-213ENST00000482878 IFNAR1P17181 557 aa14.08□□□□□ -0.16
CCDC78-213ENST00000482878 ARID4AP29374 1257 aaPredicted RBP14.08□□□□□ -0.16
CCDC78-213ENST00000482878 NR5A1Q13285 461 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms