RNA–Protein interactions for RNA: ENST00000482541.2

CCNC-204, Transcript of cyclin C, humanhuman

TSL 1 (best) BASIC

Gene CCNC, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-204ENST00000482541 TEX11Q8IYF3 940 aa9.46□□□□□ -0.89
CCNC-204ENST00000482541 RHPN1Q8TCX5 695 aa9.46□□□□□ -0.89
CCNC-204ENST00000482541 TBC1D2Q9BYX2 928 aa9.46□□□□□ -0.89
CCNC-204ENST00000482541 AATFQ9NY61 560 aaKnown RBP eCLIP9.46□□□□□ -0.89
CCNC-204ENST00000482541 HERC5Q9UII4 1024 aaKnown RBP9.46□□□□□ -0.89
CCNC-204ENST00000482541 COG6Q9Y2V7 657 aa9.46□□□□□ -0.89
CCNC-204ENST00000482541 A0A0G2JLL6 359 aaPredicted RBP9.45□□□□□ -0.9
CCNC-204ENST00000482541 POTEFA5A3E0 1075 aa9.45□□□□□ -0.9
CCNC-204ENST00000482541 LACTBP83111 547 aaPredicted RBP9.45□□□□□ -0.9
CCNC-204ENST00000482541 MOGSQ13724 837 aa9.45□□□□□ -0.9
CCNC-204ENST00000482541 PRRT2Q7Z6L0 340 aaPredicted RBP9.45□□□□□ -0.9
CCNC-204ENST00000482541 AACSQ86V21 672 aa9.45□□□□□ -0.9
CCNC-204ENST00000482541 FOXP4Q8IVH2 680 aaPredicted RBP9.45□□□□□ -0.9
CCNC-204ENST00000482541 CLASRPQ8N2M8 674 aaKnown RBP9.45□□□□□ -0.9
CCNC-204ENST00000482541 SH3RF3Q8TEJ3 882 aaPredicted RBP9.45□□□□□ -0.9
CCNC-204ENST00000482541 KIF1BPQ96EK5 621 aa9.45□□□□□ -0.9
CCNC-204ENST00000482541 TLR7Q9NYK1 1049 aaKnown RBP9.45□□□□□ -0.9
CCNC-204ENST00000482541 SLC45A1Q9Y2W3 748 aa9.45□□□□□ -0.9
CCNC-204ENST00000482541 RAB11FIP3O75154 756 aa9.45□□□□□ -0.9
CCNC-204ENST00000482541 ZMYND10O75800 440 aa9.45□□□□□ -0.9
CCNC-204ENST00000482541 CAP2P40123 477 aa9.45□□□□□ -0.9
CCNC-204ENST00000482541 PRMT2P55345 433 aa9.45□□□□□ -0.9
CCNC-204ENST00000482541 MAP3K12Q12852 859 aa9.45□□□□□ -0.9
CCNC-204ENST00000482541 TTF1Q15361 905 aaPredicted RBP9.45□□□□□ -0.9
CCNC-204ENST00000482541 GPAT2Q6NUI2 795 aa9.45□□□□□ -0.9
CCNC-204ENST00000482541 ADGRA1Q86SQ6 560 aa9.45□□□□□ -0.9
CCNC-204ENST00000482541 NBPF11Q86T75 865 aa9.45□□□□□ -0.9
CCNC-204ENST00000482541 SIRT2Q8IXJ6 389 aa9.45□□□□□ -0.9
CCNC-204ENST00000482541 PIH1D3Q9NQM4 214 aaKnown RBP9.45□□□□□ -0.9
CCNC-204ENST00000482541 IDH1O75874 414 aaKnown RBP9.44□□□□□ -0.9
CCNC-204ENST00000482541 SLURP2P0DP57 97 aa9.44□□□□□ -0.9
CCNC-204ENST00000482541 C7P10643 843 aa9.44□□□□□ -0.9
CCNC-204ENST00000482541 CYP7A1P22680 504 aa9.44□□□□□ -0.9
CCNC-204ENST00000482541 CAP1Q01518 475 aa9.44□□□□□ -0.9
CCNC-204ENST00000482541 METTL16Q86W50 562 aaKnown RBP9.44□□□□□ -0.9
CCNC-204ENST00000482541 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.44□□□□□ -0.9
CCNC-204ENST00000482541 TGFBRAP1Q8WUH2 860 aa9.44□□□□□ -0.9
CCNC-204ENST00000482541 ARMC5Q96C12 935 aa9.44□□□□□ -0.9
CCNC-204ENST00000482541 PARK7Q99497 189 aaKnown RBP9.44□□□□□ -0.9
CCNC-204ENST00000482541 SLC24A3Q9HC58 644 aa9.44□□□□□ -0.9
CCNC-204ENST00000482541 IL1RAPL2Q9NP60 686 aa9.44□□□□□ -0.9
CCNC-204ENST00000482541 DOCK1Q14185 1865 aa9.43□□□□□ -0.9
CCNC-204ENST00000482541 MYO5AQ9Y4I1 1855 aaKnown RBP9.43□□□□□ -0.9
CCNC-204ENST00000482541 HOXD10P28358 340 aa9.43□□□□□ -0.9
CCNC-204ENST00000482541 GINM1Q9NU53 330 aa9.43□□□□□ -0.9
CCNC-204ENST00000482541 CPA4Q9UI42 421 aa9.43□□□□□ -0.9
CCNC-204ENST00000482541 ADGRA2Q96PE1 1338 aa9.43□□□□□ -0.9
CCNC-204ENST00000482541 MAST2Q6P0Q8 1798 aa9.43□□□□□ -0.9
CCNC-204ENST00000482541 FAM196BA6NMK8 535 aa9.42□□□□□ -0.9
CCNC-204ENST00000482541 USP17L5A8MUK1 530 aa9.42□□□□□ -0.9
CCNC-204ENST00000482541 IFIT2P09913 472 aaKnown RBP9.42□□□□□ -0.9
CCNC-204ENST00000482541 FLT1P17948 1338 aa9.42□□□□□ -0.9
CCNC-204ENST00000482541 MAPKAPK5Q8IW41 473 aa9.42□□□□□ -0.9
CCNC-204ENST00000482541 MAGEB6Q8N7X4 407 aa9.42□□□□□ -0.9
CCNC-204ENST00000482541 PROCA1Q8NCQ7 364 aaPredicted RBP9.42□□□□□ -0.9
CCNC-204ENST00000482541 ZNF280CQ8ND82 737 aa9.42□□□□□ -0.9
CCNC-204ENST00000482541 ANTXR1Q9H6X2 564 aa9.42□□□□□ -0.9
CCNC-204ENST00000482541 AS3MTQ9HBK9 375 aa9.42□□□□□ -0.9
CCNC-204ENST00000482541 PALD1Q9ULE6 856 aa9.42□□□□□ -0.9
CCNC-204ENST00000482541 PHIPQ8WWQ0 1821 aa9.42□□□□□ -0.9
CCNC-204ENST00000482541 TRIM75PA6NK02 468 aa9.42□□□□□ -0.9
CCNC-204ENST00000482541 HLA-DOAP06340 250 aa9.42□□□□□ -0.9
CCNC-204ENST00000482541 ASNSP08243 561 aa9.42□□□□□ -0.9
CCNC-204ENST00000482541 CYP2C8P10632 490 aa9.42□□□□□ -0.9
CCNC-204ENST00000482541 BCRP11274 1271 aa9.42□□□□□ -0.9
CCNC-204ENST00000482541 PSMC4P43686 418 aa9.42□□□□□ -0.9
CCNC-204ENST00000482541 SPP2Q13103 211 aa9.42□□□□□ -0.9
CCNC-204ENST00000482541 SLC9C1Q4G0N8 1177 aa9.42□□□□□ -0.9
CCNC-204ENST00000482541 GADL1Q6ZQY3 521 aa9.42□□□□□ -0.9
CCNC-204ENST00000482541 CRACR2BQ8N4Y2 399 aaPredicted RBP9.42□□□□□ -0.9
CCNC-204ENST00000482541 ARHGAP39Q9C0H5 1083 aa9.42□□□□□ -0.9
CCNC-204ENST00000482541 METRNQ9UJH8 293 aa9.42□□□□□ -0.9
CCNC-204ENST00000482541 AGTPBP1Q9UPW5 1226 aa9.42□□□□□ -0.9
CCNC-204ENST00000482541 PTCH2Q9Y6C5 1203 aa9.42□□□□□ -0.9
CCNC-204ENST00000482541 FOCADQ5VW36 1801 aa9.41□□□□□ -0.9
CCNC-204ENST00000482541 PTPRFP10586 1907 aa9.41□□□□□ -0.9
CCNC-204ENST00000482541 APBB1O00213 710 aa9.41□□□□□ -0.9
CCNC-204ENST00000482541 FMNL1O95466 1100 aaPredicted RBP9.41□□□□□ -0.9
CCNC-204ENST00000482541 USP5P45974 858 aa9.41□□□□□ -0.9
CCNC-204ENST00000482541 DYNLL1P63167 89 aaKnown RBP9.41□□□□□ -0.9
CCNC-204ENST00000482541 RRP1BQ14684 758 aaKnown RBP9.41□□□□□ -0.9
CCNC-204ENST00000482541 SH3D19Q5HYK7 790 aa9.41□□□□□ -0.9
CCNC-204ENST00000482541 TTC6Q86TZ1 520 aa9.41□□□□□ -0.9
CCNC-204ENST00000482541 GPIHBP1Q8IV16 184 aa9.41□□□□□ -0.9
CCNC-204ENST00000482541 ZNF333Q96JL9 665 aa9.41□□□□□ -0.9
CCNC-204ENST00000482541 WDR18Q9BV38 432 aa9.41□□□□□ -0.9
CCNC-204ENST00000482541 TRIM34Q9BYJ4 488 aa9.41□□□□□ -0.9
CCNC-204ENST00000482541 SRRDQ9UH36 339 aa9.41□□□□□ -0.9
CCNC-204ENST00000482541 PNMA3Q9UL41 463 aa9.41□□□□□ -0.9
CCNC-204ENST00000482541 NDUFB9Q9Y6M9 179 aa9.41□□□□□ -0.9
CCNC-204ENST00000482541 CDK5RAP2Q96SN8 1893 aa9.41□□□□□ -0.9
CCNC-204ENST00000482541 C19orf81C9J6K1 198 aa9.4□□□□□ -0.9
CCNC-204ENST00000482541 CTGFP29279 349 aa9.4□□□□□ -0.9
CCNC-204ENST00000482541 FCGRTP55899 365 aa9.4□□□□□ -0.9
CCNC-204ENST00000482541 PABPC4Q13310 644 aaKnown RBP eCLIP9.4□□□□□ -0.92e-6■□□□□ 9.8
CCNC-204ENST00000482541 SLC9C2Q5TAH2 1124 aa9.4□□□□□ -0.9
CCNC-204ENST00000482541 C20orf194Q5TEA3 1177 aa9.4□□□□□ -0.9
CCNC-204ENST00000482541 CCDC84Q86UT8 332 aaPredicted RBP9.4□□□□□ -0.9
CCNC-204ENST00000482541 MIGA1Q8NAN2 632 aa9.4□□□□□ -0.9
CCNC-204ENST00000482541 SMCR8Q8TEV9 937 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms