RNA–Protein interactions for RNA: ENST00000481628.1

CLIP4-210, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-210ENST00000481628 DEFB118Q96PH6 123 aa11.16□□□□□ -0.62
CLIP4-210ENST00000481628 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.16□□□□□ -0.62
CLIP4-210ENST00000481628 PIH1D3Q9NQM4 214 aaKnown RBP11.16□□□□□ -0.62
CLIP4-210ENST00000481628 SNRKQ9NRH2 765 aa11.16□□□□□ -0.62
CLIP4-210ENST00000481628 ZBTB21Q9ULJ3 1066 aa11.16□□□□□ -0.62
CLIP4-210ENST00000481628 NR2E3Q9Y5X4 410 aa11.16□□□□□ -0.62
CLIP4-210ENST00000481628 RANBP2P49792 3224 aaKnown RBP11.16□□□□□ -0.62
CLIP4-210ENST00000481628 USP17L10C9JJH3 530 aa11.15□□□□□ -0.62
CLIP4-210ENST00000481628 RLBP1P12271 317 aa11.15□□□□□ -0.62
CLIP4-210ENST00000481628 IRX3P78415 501 aaPredicted RBP11.15□□□□□ -0.62
CLIP4-210ENST00000481628 MAPKAPK5Q8IW41 473 aa11.15□□□□□ -0.62
CLIP4-210ENST00000481628 GTF3C2Q8WUA4 911 aaPredicted RBP11.15□□□□□ -0.62
CLIP4-210ENST00000481628 SOCS4Q8WXH5 440 aa11.15□□□□□ -0.62
CLIP4-210ENST00000481628 EAF2Q96CJ1 260 aaPredicted RBP11.15□□□□□ -0.62
CLIP4-210ENST00000481628 C12orf42Q96LP6 360 aa11.15□□□□□ -0.62
CLIP4-210ENST00000481628 EHD4Q9H223 541 aa11.15□□□□□ -0.62
CLIP4-210ENST00000481628 TLR7Q9NYK1 1049 aaKnown RBP11.15□□□□□ -0.62
CLIP4-210ENST00000481628 RPTORQ8N122 1335 aa11.14□□□□□ -0.63
CLIP4-210ENST00000481628 HLA-DOAP06340 250 aa11.14□□□□□ -0.63
CLIP4-210ENST00000481628 XRCC5P13010 732 aaKnown RBP11.14□□□□□ -0.63
CLIP4-210ENST00000481628 KCNA4P22459 653 aa11.14□□□□□ -0.63
CLIP4-210ENST00000481628 MNX1P50219 401 aaPredicted RBP11.14□□□□□ -0.63
CLIP4-210ENST00000481628 HERVK_113P62684 666 aa11.14□□□□□ -0.63
CLIP4-210ENST00000481628 OS9Q13438 667 aaPredicted RBP11.14□□□□□ -0.63
CLIP4-210ENST00000481628 SHROOM1Q2M3G4 852 aaPredicted RBP11.14□□□□□ -0.63
CLIP4-210ENST00000481628 TATDN1Q6P1N9 297 aa11.14□□□□□ -0.63
CLIP4-210ENST00000481628 CEP85Q6P2H3 762 aa11.14□□□□□ -0.63
CLIP4-210ENST00000481628 CRACR2BQ8N4Y2 399 aaPredicted RBP11.14□□□□□ -0.63
CLIP4-210ENST00000481628 TRIB2Q92519 343 aa11.14□□□□□ -0.63
CLIP4-210ENST00000481628 USP6NLQ92738 828 aa11.14□□□□□ -0.63
CLIP4-210ENST00000481628 C1orf115Q9H7X2 142 aa11.14□□□□□ -0.63
CLIP4-210ENST00000481628 TXNRD2Q9NNW7 524 aa11.14□□□□□ -0.63
CLIP4-210ENST00000481628 TMOD4Q9NZQ9 345 aa11.14□□□□□ -0.63
CLIP4-210ENST00000481628 PALD1Q9ULE6 856 aa11.14□□□□□ -0.63
CLIP4-210ENST00000481628 GDF11O95390 407 aa11.13□□□□□ -0.63
CLIP4-210ENST00000481628 TFRCP02786 760 aaKnown RBP11.13□□□□□ -0.63
CLIP4-210ENST00000481628 CYP7A1P22680 504 aa11.13□□□□□ -0.63
CLIP4-210ENST00000481628 MAPK4P31152 587 aa11.13□□□□□ -0.63
CLIP4-210ENST00000481628 DYNLL1P63167 89 aaKnown RBP11.13□□□□□ -0.63
CLIP4-210ENST00000481628 DIEXFQ68CQ4 756 aaKnown RBP11.13□□□□□ -0.63
CLIP4-210ENST00000481628 POTEEQ6S8J3 1075 aa11.13□□□□□ -0.63
CLIP4-210ENST00000481628 FTSJ3Q8IY81 847 aaKnown RBP11.13□□□□□ -0.63
CLIP4-210ENST00000481628 TRMT44Q8IYL2 757 aaKnown RBP11.13□□□□□ -0.63
CLIP4-210ENST00000481628 P2RX7Q99572 595 aaKnown RBP11.13□□□□□ -0.63
CLIP4-210ENST00000481628 HMX1Q9NP08 348 aaPredicted RBP11.13□□□□□ -0.63
CLIP4-210ENST00000481628 RBPJLQ9UBG7 517 aa11.13□□□□□ -0.63
CLIP4-210ENST00000481628 OGDHLQ9ULD0 1010 aa11.13□□□□□ -0.63
CLIP4-210ENST00000481628 MYH1P12882 1939 aa11.13□□□□□ -0.63
CLIP4-210ENST00000481628 EVI5O60447 810 aa11.12□□□□□ -0.63
CLIP4-210ENST00000481628 ERVK-9P63128 1117 aa11.12□□□□□ -0.63
CLIP4-210ENST00000481628 ERVK-24P63145 666 aa11.12□□□□□ -0.63
CLIP4-210ENST00000481628 TRIM32Q13049 653 aa11.12□□□□□ -0.63
CLIP4-210ENST00000481628 MORN1Q5T089 497 aa11.12□□□□□ -0.63
CLIP4-210ENST00000481628 USP17L2Q6R6M4 530 aa11.12□□□□□ -0.63
CLIP4-210ENST00000481628 LBX2Q6XYB7 198 aa11.12□□□□□ -0.63
CLIP4-210ENST00000481628 NECAB2Q7Z6G3 386 aa11.12□□□□□ -0.63
CLIP4-210ENST00000481628 ERC1Q8IUD2 1116 aa11.12□□□□□ -0.63
CLIP4-210ENST00000481628 ITPRIPQ8IWB1 547 aa11.12□□□□□ -0.63
CLIP4-210ENST00000481628 GPRC5AQ8NFJ5 357 aa11.12□□□□□ -0.63
CLIP4-210ENST00000481628 DIS3LQ8TF46 1054 aaKnown RBP11.12□□□□□ -0.63
CLIP4-210ENST00000481628 PAWRQ96IZ0 340 aaKnown RBP11.12□□□□□ -0.63
CLIP4-210ENST00000481628 NUDT12Q9BQG2 462 aa11.12□□□□□ -0.63
CLIP4-210ENST00000481628 TRIM34Q9BYJ4 488 aa11.12□□□□□ -0.63
CLIP4-210ENST00000481628 CCDC8Q9H0W5 538 aaPredicted RBP11.12□□□□□ -0.63
CLIP4-210ENST00000481628 EMILIN3Q9NT22 766 aa11.12□□□□□ -0.63
CLIP4-210ENST00000481628 SERPINB13Q9UIV8 391 aa11.12□□□□□ -0.63
CLIP4-210ENST00000481628 TAOK2Q9UL54 1235 aa11.12□□□□□ -0.63
CLIP4-210ENST00000481628 NAV1Q8NEY1 1877 aa11.11□□□□□ -0.63
CLIP4-210ENST00000481628 IDH1O75874 414 aaKnown RBP11.11□□□□□ -0.63
CLIP4-210ENST00000481628 GH2P01242 217 aa11.11□□□□□ -0.63
CLIP4-210ENST00000481628 BMP8BP34820 402 aa11.11□□□□□ -0.63
CLIP4-210ENST00000481628 MAP3K12Q12852 859 aa11.11□□□□□ -0.63
CLIP4-210ENST00000481628 MAGEB6Q8N7X4 407 aa11.11□□□□□ -0.63
CLIP4-210ENST00000481628 GDF15Q99988 308 aa11.11□□□□□ -0.63
CLIP4-210ENST00000481628 RIOK1Q9BRS2 568 aaKnown RBP11.11□□□□□ -0.63
CLIP4-210ENST00000481628 KIAA1683Q9H0B3 1180 aa11.11□□□□□ -0.63
CLIP4-210ENST00000481628 SAP30BPQ9UHR5 308 aaKnown RBP11.11□□□□□ -0.63
CLIP4-210ENST00000481628 ZNF236Q9UL36 1845 aa11.11□□□□□ -0.63
CLIP4-210ENST00000481628 A0A0G2JMZ2 1700 aa11.1□□□□□ -0.63
CLIP4-210ENST00000481628 CNMDO75829 334 aa11.1□□□□□ -0.63
CLIP4-210ENST00000481628 PRKAR2AP13861 404 aaKnown RBP11.1□□□□□ -0.63
CLIP4-210ENST00000481628 USP5P45974 858 aa11.1□□□□□ -0.63
CLIP4-210ENST00000481628 GABPAQ06546 454 aa11.1□□□□□ -0.63
CLIP4-210ENST00000481628 Q3C1V9 767 aa11.1□□□□□ -0.63
CLIP4-210ENST00000481628 GPR142Q7Z601 462 aa11.1□□□□□ -0.63
CLIP4-210ENST00000481628 TTC6Q86TZ1 520 aa11.1□□□□□ -0.63
CLIP4-210ENST00000481628 MIGA1Q8NAN2 632 aa11.1□□□□□ -0.63
CLIP4-210ENST00000481628 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.1□□□□□ -0.63
CLIP4-210ENST00000481628 APBA2Q99767 749 aa11.1□□□□□ -0.63
CLIP4-210ENST00000481628 NBPF3Q9H094 633 aa11.1□□□□□ -0.63
CLIP4-210ENST00000481628 PORCNQ9H237 461 aa11.1□□□□□ -0.63
CLIP4-210ENST00000481628 ANTXR1Q9H6X2 564 aa11.1□□□□□ -0.63
CLIP4-210ENST00000481628 RABGAP1Q9Y3P9 1069 aa11.1□□□□□ -0.63
CLIP4-210ENST00000481628 ZBED9Q6R2W3 1325 aa11.09□□□□□ -0.63
CLIP4-210ENST00000481628 SZT2Q5T011 3432 aa11.09□□□□□ -0.63
CLIP4-210ENST00000481628 USP17L15C9J2P7 530 aa11.09□□□□□ -0.63
CLIP4-210ENST00000481628 USP17L13C9JLJ4 530 aa11.09□□□□□ -0.63
CLIP4-210ENST00000481628 USP17L11C9JVI0 530 aa11.09□□□□□ -0.63
CLIP4-210ENST00000481628 USP17L18D6R9N7 530 aa11.09□□□□□ -0.63
CLIP4-210ENST00000481628 USP17L22D6RA61 530 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms