RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 JMYQ8N9B5 988 aa8.27□□□□□ -1.09
PBRM1-220ENST00000480064 C8orf48Q96LL4 319 aa8.27□□□□□ -1.09
PBRM1-220ENST00000480064 CBX8Q9HC52 389 aa8.27□□□□□ -1.09
PBRM1-220ENST00000480064 PCDHB14Q9Y5E9 798 aa8.27□□□□□ -1.09
PBRM1-220ENST00000480064 SLC12A7Q9Y666 1083 aa8.27□□□□□ -1.09
PBRM1-220ENST00000480064 FAM221AA4D161 298 aa8.26□□□□□ -1.09
PBRM1-220ENST00000480064 PLIN1O60240 522 aa8.26□□□□□ -1.09
PBRM1-220ENST00000480064 CDKN1CP49918 316 aaPredicted RBP8.26□□□□□ -1.09
PBRM1-220ENST00000480064 ZNF157P51786 506 aaPredicted RBP8.26□□□□□ -1.09
PBRM1-220ENST00000480064 AXDND1Q5T1B0 1012 aaPredicted RBP8.26□□□□□ -1.09
PBRM1-220ENST00000480064 LLGL2Q6P1M3 1020 aa8.26□□□□□ -1.09
PBRM1-220ENST00000480064 SMC5Q8IY18 1101 aa8.26□□□□□ -1.09
PBRM1-220ENST00000480064 TMEM102Q8N9M5 508 aaPredicted RBP8.26□□□□□ -1.09
PBRM1-220ENST00000480064 PMM1Q92871 262 aa8.26□□□□□ -1.09
PBRM1-220ENST00000480064 RELTQ969Z4 430 aa8.26□□□□□ -1.09
PBRM1-220ENST00000480064 NSUN5Q96P11 429 aaKnown RBP8.26□□□□□ -1.09
PBRM1-220ENST00000480064 SLC26A8Q96RN1 970 aa8.26□□□□□ -1.09
PBRM1-220ENST00000480064 CAAP1Q9H8G2 361 aa8.26□□□□□ -1.09
PBRM1-220ENST00000480064 DLL1O00548 723 aa8.25□□□□□ -1.09
PBRM1-220ENST00000480064 IRS4O14654 1257 aaPredicted RBP8.25□□□□□ -1.09
PBRM1-220ENST00000480064 TRPA1O75762 1119 aa8.25□□□□□ -1.09
PBRM1-220ENST00000480064 HOXD8P13378 290 aaPredicted RBP8.25□□□□□ -1.09
PBRM1-220ENST00000480064 NME2P22392 152 aa8.25□□□□□ -1.09
PBRM1-220ENST00000480064 PMLP29590 882 aa8.25□□□□□ -1.09
PBRM1-220ENST00000480064 STAT3P40763 770 aa8.25□□□□□ -1.09
PBRM1-220ENST00000480064 EVA1CP58658 441 aa8.25□□□□□ -1.09
PBRM1-220ENST00000480064 MLECQ14165 292 aa8.25□□□□□ -1.09
PBRM1-220ENST00000480064 C21orf62-AS1Q17RA5 79 aa8.25□□□□□ -1.09
PBRM1-220ENST00000480064 LRRFIP1Q32MZ4 808 aaKnown RBP8.25□□□□□ -1.09
PBRM1-220ENST00000480064 TM4SF20Q53R12 229 aa8.25□□□□□ -1.09
PBRM1-220ENST00000480064 BRDTQ58F21 947 aaPredicted RBP8.25□□□□□ -1.09
PBRM1-220ENST00000480064 ZC3H12BQ5HYM0 836 aaKnown RBP8.25□□□□□ -1.09
PBRM1-220ENST00000480064 CCSAPQ6IQ19 270 aaPredicted RBP8.25□□□□□ -1.09
PBRM1-220ENST00000480064 GDF6Q6KF10 455 aaPredicted RBP8.25□□□□□ -1.09
PBRM1-220ENST00000480064 LRRC47Q8N1G4 583 aaKnown RBP8.25□□□□□ -1.09
PBRM1-220ENST00000480064 NINJ1Q92982 152 aa8.25□□□□□ -1.09
PBRM1-220ENST00000480064 EMILIN2Q9BXX0 1053 aa8.25□□□□□ -1.09
PBRM1-220ENST00000480064 IQCA1LA6NCM1 817 aa8.24□□□□□ -1.09
PBRM1-220ENST00000480064 PDE2AO00408 941 aaPredicted RBP8.24□□□□□ -1.09
PBRM1-220ENST00000480064 NFKB2Q00653 900 aa8.24□□□□□ -1.09
PBRM1-220ENST00000480064 FAAP100Q0VG06 881 aa8.24□□□□□ -1.09
PBRM1-220ENST00000480064 FAM50AQ14320 339 aaKnown RBP8.24□□□□□ -1.09
PBRM1-220ENST00000480064 JAMLQ86YT9 394 aa8.24□□□□□ -1.09
PBRM1-220ENST00000480064 SULF2Q8IWU5 870 aa8.24□□□□□ -1.09
PBRM1-220ENST00000480064 IL22RA1Q8N6P7 574 aa8.24□□□□□ -1.09
PBRM1-220ENST00000480064 MEGF10Q96KG7 1140 aa8.24□□□□□ -1.09
PBRM1-220ENST00000480064 TM9SF2Q99805 663 aa8.24□□□□□ -1.09
PBRM1-220ENST00000480064 KRTAP4-8Q9BYQ9 185 aa8.24□□□□□ -1.09
PBRM1-220ENST00000480064 CPEP16870 476 aa8.23□□□□□ -1.09
PBRM1-220ENST00000480064 GUCY2CP25092 1073 aa8.23□□□□□ -1.09
PBRM1-220ENST00000480064 EPHB1P54762 984 aa8.23□□□□□ -1.09
PBRM1-220ENST00000480064 RPL6Q02878 288 aaKnown RBP8.23□□□□□ -1.09
PBRM1-220ENST00000480064 BIRC2Q13490 618 aa8.23□□□□□ -1.09
PBRM1-220ENST00000480064 NCAPHQ15003 741 aa8.23□□□□□ -1.09
PBRM1-220ENST00000480064 COL13A1Q5TAT6 717 aaPredicted RBP8.23□□□□□ -1.09
PBRM1-220ENST00000480064 HGSNATQ68CP4 663 aa8.23□□□□□ -1.09
PBRM1-220ENST00000480064 TTC6Q86TZ1 520 aa8.23□□□□□ -1.09
PBRM1-220ENST00000480064 THNSL2Q86YJ6 484 aa8.23□□□□□ -1.09
PBRM1-220ENST00000480064 CEP120Q8N960 986 aa8.23□□□□□ -1.09
PBRM1-220ENST00000480064 PSMG3-AS1Q96PY0 264 aa8.23□□□□□ -1.09
PBRM1-220ENST00000480064 CLEC4MQ9H2X3 399 aaPredicted RBP8.23□□□□□ -1.09
PBRM1-220ENST00000480064 EHMT1Q9H9B1 1298 aa8.23□□□□□ -1.09
PBRM1-220ENST00000480064 CCDC163A0A0D9SF12 145 aa8.22□□□□□ -1.09
PBRM1-220ENST00000480064 A0A1W2PQH9 124 aa8.22□□□□□ -1.09
PBRM1-220ENST00000480064 FAM177BA6PVY3 158 aa8.22□□□□□ -1.09
PBRM1-220ENST00000480064 AGRPO00253 132 aa8.22□□□□□ -1.09
PBRM1-220ENST00000480064 KIF3BO15066 747 aa8.22□□□□□ -1.09
PBRM1-220ENST00000480064 GRIN3BO60391 1043 aa8.22□□□□□ -1.09
PBRM1-220ENST00000480064 PDE8AO60658 829 aa8.22□□□□□ -1.09
PBRM1-220ENST00000480064 RHBDL3P58872 404 aa8.22□□□□□ -1.09
PBRM1-220ENST00000480064 OS9Q13438 667 aaPredicted RBP8.22□□□□□ -1.09
PBRM1-220ENST00000480064 LRP8Q14114 963 aa8.22□□□□□ -1.09
PBRM1-220ENST00000480064 LONRF2Q1L5Z9 754 aa8.22□□□□□ -1.09
PBRM1-220ENST00000480064 RUFY4Q6ZNE9 571 aa8.22□□□□□ -1.09
PBRM1-220ENST00000480064 NBPF11Q86T75 865 aa8.22□□□□□ -1.09
PBRM1-220ENST00000480064 DDX42Q86XP3 938 aaKnown RBP eCLIP8.22□□□□□ -1.09
PBRM1-220ENST00000480064 ATL2Q8NHH9 583 aa8.22□□□□□ -1.09
PBRM1-220ENST00000480064 NXPE3Q969Y0 559 aa8.22□□□□□ -1.09
PBRM1-220ENST00000480064 HHIPQ96QV1 700 aa8.22□□□□□ -1.09
PBRM1-220ENST00000480064 SPATA9Q9BWV2 254 aa8.22□□□□□ -1.09
PBRM1-220ENST00000480064 AKTIPQ9H8T0 292 aa8.22□□□□□ -1.09
PBRM1-220ENST00000480064 THRAP3Q9Y2W1 955 aaKnown RBP8.22□□□□□ -1.09
PBRM1-220ENST00000480064 ALDH1L1O75891 902 aa8.21□□□□□ -1.1
PBRM1-220ENST00000480064 PPP2R5AQ15172 486 aa8.21□□□□□ -1.1
PBRM1-220ENST00000480064 VHLLQ6RSH7 139 aa8.21□□□□□ -1.1
PBRM1-220ENST00000480064 TMEM130Q8N3G9 435 aa8.21□□□□□ -1.1
PBRM1-220ENST00000480064 DDX54Q8TDD1 881 aaKnown RBP8.21□□□□□ -1.1
PBRM1-220ENST00000480064 IPO9Q96P70 1041 aaKnown RBP8.21□□□□□ -1.1
PBRM1-220ENST00000480064 MRPL18Q9H0U6 180 aaKnown RBP8.21□□□□□ -1.1
PBRM1-220ENST00000480064 TRIM33Q9UPN9 1127 aa8.21□□□□□ -1.1
PBRM1-220ENST00000480064 KCNQ2O43526 872 aa8.2□□□□□ -1.1
PBRM1-220ENST00000480064 ATE1O95260 518 aa8.2□□□□□ -1.1
PBRM1-220ENST00000480064 PABPC4Q13310 644 aaKnown RBP eCLIP8.2□□□□□ -1.1
PBRM1-220ENST00000480064 SETDB1Q15047 1291 aa8.2□□□□□ -1.1
PBRM1-220ENST00000480064 MRM1Q6IN84 353 aaKnown RBP8.2□□□□□ -1.1
PBRM1-220ENST00000480064 MAP4K3Q8IVH8 894 aa8.2□□□□□ -1.1
PBRM1-220ENST00000480064 CACTIN-AS1Q8N1I8 211 aa8.2□□□□□ -1.1
PBRM1-220ENST00000480064 DCAF11Q8TEB1 546 aa8.2□□□□□ -1.1
PBRM1-220ENST00000480064 GAL3ST3Q96A11 431 aa8.2□□□□□ -1.1
PBRM1-220ENST00000480064 EPN3Q9H201 632 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms