RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 SKAP1Q86WV1 359 aa15.65■□□□□ 0.1
TOP3A-205ENST00000477508 CCDC17Q96LX7 622 aa15.65■□□□□ 0.1
TOP3A-205ENST00000477508 AOC2O75106 756 aa15.64■□□□□ 0.09
TOP3A-205ENST00000477508 PTPRAP18433 802 aa15.64■□□□□ 0.09
TOP3A-205ENST00000477508 GTF2A2P52657 109 aa15.64■□□□□ 0.09
TOP3A-205ENST00000477508 KIF23Q02241 960 aaPredicted RBP15.64■□□□□ 0.09
TOP3A-205ENST00000477508 VPS53Q5VIR6 699 aa15.64■□□□□ 0.09
TOP3A-205ENST00000477508 OTUD5Q96G74 571 aa15.64■□□□□ 0.09
TOP3A-205ENST00000477508 DSCC1Q9BVC3 393 aa15.64■□□□□ 0.09
TOP3A-205ENST00000477508 CABP5Q9NP86 173 aa15.64■□□□□ 0.09
TOP3A-205ENST00000477508 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.64■□□□□ 0.09
TOP3A-205ENST00000477508 ROBO3Q96MS0 1386 aa15.63■□□□□ 0.09
TOP3A-205ENST00000477508 DOCK1Q14185 1865 aa15.63■□□□□ 0.09
TOP3A-205ENST00000477508 CYP2D7A0A087X1C5 515 aa15.63■□□□□ 0.09
TOP3A-205ENST00000477508 USP17L5A8MUK1 530 aa15.63■□□□□ 0.09
TOP3A-205ENST00000477508 CXCL11O14625 94 aa15.63■□□□□ 0.09
TOP3A-205ENST00000477508 FOXP2O15409 715 aa15.63■□□□□ 0.09
TOP3A-205ENST00000477508 FGAP02671 866 aa15.63■□□□□ 0.09
TOP3A-205ENST00000477508 SLURP2P0DP57 97 aa15.63■□□□□ 0.09
TOP3A-205ENST00000477508 SHMT1P34896 483 aa15.63■□□□□ 0.09
TOP3A-205ENST00000477508 CDK8P49336 464 aa15.63■□□□□ 0.09
TOP3A-205ENST00000477508 PDE4BQ07343 736 aa15.63■□□□□ 0.09
TOP3A-205ENST00000477508 SNAPC2Q13487 334 aa15.63■□□□□ 0.09
TOP3A-205ENST00000477508 ABCB5Q2M3G0 1257 aa15.63■□□□□ 0.09
TOP3A-205ENST00000477508 BEGAINQ9BUH8 593 aa15.63■□□□□ 0.09
TOP3A-205ENST00000477508 MKNK2Q9HBH9 465 aa15.63■□□□□ 0.09
TOP3A-205ENST00000477508 AS3MTQ9HBK9 375 aa15.63■□□□□ 0.09
TOP3A-205ENST00000477508 CTNNA3Q9UI47 895 aa15.63■□□□□ 0.09
TOP3A-205ENST00000477508 ANAPC4Q9UJX5 808 aa15.63■□□□□ 0.09
TOP3A-205ENST00000477508 ZHX2Q9Y6X8 837 aa15.63■□□□□ 0.09
TOP3A-205ENST00000477508 THSD7BQ9C0I4 1608 aa15.63■□□□□ 0.09
TOP3A-205ENST00000477508 SGSM2O43147 1006 aa15.62■□□□□ 0.09
TOP3A-205ENST00000477508 CA12O43570 354 aa15.62■□□□□ 0.09
TOP3A-205ENST00000477508 CDC45O75419 566 aa15.62■□□□□ 0.09
TOP3A-205ENST00000477508 TM4SF4P48230 202 aa15.62■□□□□ 0.09
TOP3A-205ENST00000477508 C1QBPQ07021 282 aaKnown RBP15.62■□□□□ 0.09
TOP3A-205ENST00000477508 PPARAQ07869 468 aa15.62■□□□□ 0.09
TOP3A-205ENST00000477508 OTUD7BQ6GQQ9 843 aa15.62■□□□□ 0.09
TOP3A-205ENST00000477508 DYNLL2Q96FJ2 89 aa15.62■□□□□ 0.09
TOP3A-205ENST00000477508 ZBTB21Q9ULJ3 1066 aa15.62■□□□□ 0.09
TOP3A-205ENST00000477508 KCNH4Q9UQ05 1017 aa15.62■□□□□ 0.09
TOP3A-205ENST00000477508 TESPA1A2RU30 521 aaPredicted RBP15.61■□□□□ 0.09
TOP3A-205ENST00000477508 IRF6O14896 467 aa15.61■□□□□ 0.09
TOP3A-205ENST00000477508 GH2P01242 217 aa15.61■□□□□ 0.09
TOP3A-205ENST00000477508 PCP11498 1178 aaKnown RBP15.61■□□□□ 0.09
TOP3A-205ENST00000477508 CETPP11597 493 aa15.61■□□□□ 0.09
TOP3A-205ENST00000477508 GJA5P36382 358 aa15.61■□□□□ 0.09
TOP3A-205ENST00000477508 NT5C2P49902 561 aa15.61■□□□□ 0.09
TOP3A-205ENST00000477508 MKRN3Q13064 507 aaKnown RBP15.61■□□□□ 0.09
TOP3A-205ENST00000477508 RRP1BQ14684 758 aaKnown RBP15.61■□□□□ 0.09
TOP3A-205ENST00000477508 KIAA1211Q6ZU35 1233 aa15.61■□□□□ 0.09
TOP3A-205ENST00000477508 TMEM179Q6ZVK1 233 aa15.61■□□□□ 0.09
TOP3A-205ENST00000477508 ZNF280CQ8ND82 737 aa15.61■□□□□ 0.09
TOP3A-205ENST00000477508 WDR18Q9BV38 432 aa15.61■□□□□ 0.09
TOP3A-205ENST00000477508 AFG3L2Q9Y4W6 797 aa15.61■□□□□ 0.09
TOP3A-205ENST00000477508 LAMB1P07942 1786 aa15.61■□□□□ 0.09
TOP3A-205ENST00000477508 GDF11O95390 407 aa15.6■□□□□ 0.09
TOP3A-205ENST00000477508 ALDH1A1P00352 501 aa15.6■□□□□ 0.09
TOP3A-205ENST00000477508 FASTKD5Q7L8L6 764 aaKnown RBP15.6■□□□□ 0.09
TOP3A-205ENST00000477508 ZNF444Q8N0Y2 327 aaPredicted RBP15.6■□□□□ 0.09
TOP3A-205ENST00000477508 SLC44A5Q8NCS7 719 aa15.6■□□□□ 0.09
TOP3A-205ENST00000477508 MS4A4AQ96JQ5 239 aa15.6■□□□□ 0.09
TOP3A-205ENST00000477508 ESYT1Q9BSJ8 1104 aa15.6■□□□□ 0.09
TOP3A-205ENST00000477508 WBP1LQ9NX94 342 aa15.6■□□□□ 0.09
TOP3A-205ENST00000477508 PCNTO95613 3336 aa15.6■□□□□ 0.09
TOP3A-205ENST00000477508 MYH8P13535 1937 aa15.6■□□□□ 0.09
TOP3A-205ENST00000477508 ATAD5Q96QE3 1844 aa15.59■□□□□ 0.09
TOP3A-205ENST00000477508 MPHOSPH10O00566 681 aaKnown RBP15.59■□□□□ 0.09
TOP3A-205ENST00000477508 ZNF213O14771 459 aa15.59■□□□□ 0.09
TOP3A-205ENST00000477508 EVX2Q03828 476 aa15.59■□□□□ 0.09
TOP3A-205ENST00000477508 ZIC5Q96T25 663 aa15.59■□□□□ 0.09
TOP3A-205ENST00000477508 RNF41Q9H4P4 317 aaPredicted RBP15.59■□□□□ 0.09
TOP3A-205ENST00000477508 ZCCHC17Q9NP64 241 aaKnown RBP15.59■□□□□ 0.09
TOP3A-205ENST00000477508 CCL15-CCL14A0A0B4J2E2 113 aa15.58■□□□□ 0.08
TOP3A-205ENST00000477508 C19orf81C9J6K1 198 aa15.58■□□□□ 0.08
TOP3A-205ENST00000477508 SPP2Q13103 211 aa15.58■□□□□ 0.08
TOP3A-205ENST00000477508 RAB3GAP1Q15042 981 aa15.58■□□□□ 0.08
TOP3A-205ENST00000477508 CCL15Q16663 113 aa15.58■□□□□ 0.08
TOP3A-205ENST00000477508 IMMTQ16891 758 aaKnown RBP15.58■□□□□ 0.08
TOP3A-205ENST00000477508 SAGE1Q9NXZ1 904 aa15.58■□□□□ 0.08
TOP3A-205ENST00000477508 A0A0G2JLL6 359 aaPredicted RBP15.57■□□□□ 0.08
TOP3A-205ENST00000477508 SMIM22K7EJ46 135 aa15.57■□□□□ 0.08
TOP3A-205ENST00000477508 ORC4O43929 436 aa15.57■□□□□ 0.08
TOP3A-205ENST00000477508 FGRP09769 529 aa15.57■□□□□ 0.08
TOP3A-205ENST00000477508 RASA1P20936 1047 aa15.57■□□□□ 0.08
TOP3A-205ENST00000477508 JAG1P78504 1218 aa15.57■□□□□ 0.08
TOP3A-205ENST00000477508 PPP4R3BQ5MIZ7 849 aa15.57■□□□□ 0.08
TOP3A-205ENST00000477508 PRRT2Q7Z6L0 340 aaPredicted RBP15.57■□□□□ 0.08
TOP3A-205ENST00000477508 IFNL1Q8IU54 200 aa15.57■□□□□ 0.08
TOP3A-205ENST00000477508 BRI3BPQ8WY22 251 aa15.57■□□□□ 0.08
TOP3A-205ENST00000477508 IL25Q9H293 177 aa15.57■□□□□ 0.08
TOP3A-205ENST00000477508 KANSL2Q9H9L4 492 aa15.57■□□□□ 0.08
TOP3A-205ENST00000477508 TRIM75PA6NK02 468 aa15.56■□□□□ 0.08
TOP3A-205ENST00000477508 USP17L10C9JJH3 530 aa15.56■□□□□ 0.08
TOP3A-205ENST00000477508 AKR1B1P15121 316 aa15.56■□□□□ 0.08
TOP3A-205ENST00000477508 USP14P54578 494 aa15.56■□□□□ 0.08
TOP3A-205ENST00000477508 BACE1P56817 501 aa15.56■□□□□ 0.08
TOP3A-205ENST00000477508 SEPT2Q15019 361 aa15.56■□□□□ 0.08
TOP3A-205ENST00000477508 SH3D19Q5HYK7 790 aa15.56■□□□□ 0.08
TOP3A-205ENST00000477508 AKNAD1Q5T1N1 836 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms