RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 TGFBRAP1Q8WUH2 860 aa25.14■■□□□ 1.62
VPS36-203ENST00000475375 TXNRD2Q9NNW7 524 aa25.14■■□□□ 1.62
VPS36-203ENST00000475375 DDX60LQ5H9U9 1706 aaKnown RBP25.14■■□□□ 1.61
VPS36-203ENST00000475375 C19orf81C9J6K1 198 aa25.13■■□□□ 1.61
VPS36-203ENST00000475375 ZKSCAN1P17029 563 aaPredicted RBP25.13■■□□□ 1.61
VPS36-203ENST00000475375 HOXA7P31268 230 aaPredicted RBP25.13■■□□□ 1.61
VPS36-203ENST00000475375 TTC39AQ5SRH9 613 aa25.13■■□□□ 1.61
VPS36-203ENST00000475375 ARHGAP45Q92619 1136 aa25.13■■□□□ 1.61
VPS36-203ENST00000475375 UBE2OQ9C0C9 1292 aaKnown RBP25.13■■□□□ 1.61
VPS36-203ENST00000475375 CWC22Q9HCG8 908 aaKnown RBP25.13■■□□□ 1.61
VPS36-203ENST00000475375 USP17L10C9JJH3 530 aa25.12■■□□□ 1.61
VPS36-203ENST00000475375 GDF11O95390 407 aa25.12■■□□□ 1.61
VPS36-203ENST00000475375 GNAI2P04899 355 aa25.12■■□□□ 1.61
VPS36-203ENST00000475375 XRCC5P13010 732 aaKnown RBP25.12■■□□□ 1.61
VPS36-203ENST00000475375 MAPK4P31152 587 aa25.12■■□□□ 1.61
VPS36-203ENST00000475375 JAG1P78504 1218 aa25.12■■□□□ 1.61
VPS36-203ENST00000475375 MAP3K21Q5TCX8 1036 aa25.12■■□□□ 1.61
VPS36-203ENST00000475375 PAGR1Q9BTK6 254 aa25.12■■□□□ 1.61
VPS36-203ENST00000475375 SHROOM1Q2M3G4 852 aaPredicted RBP25.11■■□□□ 1.61
VPS36-203ENST00000475375 GPR153Q6NV75 609 aa25.11■■□□□ 1.61
VPS36-203ENST00000475375 Q7L0L9 218 aa25.11■■□□□ 1.61
VPS36-203ENST00000475375 FOXP4Q8IVH2 680 aaPredicted RBP25.11■■□□□ 1.61
VPS36-203ENST00000475375 TRMT44Q8IYL2 757 aaKnown RBP25.11■■□□□ 1.61
VPS36-203ENST00000475375 TDHQ8IZJ6 230 aa25.11■■□□□ 1.61
VPS36-203ENST00000475375 SAP30BPQ9UHR5 308 aaKnown RBP25.11■■□□□ 1.61
VPS36-203ENST00000475375 PALD1Q9ULE6 856 aa25.11■■□□□ 1.61
VPS36-203ENST00000475375 FLT1P17948 1338 aa25.11■■□□□ 1.61
VPS36-203ENST00000475375 PLXNB2O15031 1838 aa25.1■■□□□ 1.61
VPS36-203ENST00000475375 PNMA6EA0A0J9YXQ4 647 aa25.1■■□□□ 1.61
VPS36-203ENST00000475375 CACNB2Q08289 660 aaPredicted RBP25.1■■□□□ 1.61
VPS36-203ENST00000475375 DNAJC18Q9H819 358 aa25.1■■□□□ 1.61
VPS36-203ENST00000475375 RBPJLQ9UBG7 517 aa25.1■■□□□ 1.61
VPS36-203ENST00000475375 ZBTB21Q9ULJ3 1066 aa25.1■■□□□ 1.61
VPS36-203ENST00000475375 PFASO15067 1338 aa25.1■■□□□ 1.61
VPS36-203ENST00000475375 RGS2P41220 211 aa25.09■■□□□ 1.61
VPS36-203ENST00000475375 ERVK-9P63128 1117 aa25.09■■□□□ 1.61
VPS36-203ENST00000475375 ERVK-24P63145 666 aa25.09■■□□□ 1.61
VPS36-203ENST00000475375 OS9Q13438 667 aaPredicted RBP25.09■■□□□ 1.61
VPS36-203ENST00000475375 LRIT3Q3SXY7 679 aa25.09■■□□□ 1.61
VPS36-203ENST00000475375 CCDC158Q5M9N0 1113 aa25.09■■□□□ 1.61
VPS36-203ENST00000475375 HLA-DOAP06340 250 aa25.08■■□□□ 1.61
VPS36-203ENST00000475375 GPR142Q7Z601 462 aa25.08■■□□□ 1.61
VPS36-203ENST00000475375 PLEKHH3Q7Z736 793 aa25.08■■□□□ 1.61
VPS36-203ENST00000475375 GTF3C2Q8WUA4 911 aaPredicted RBP25.08■■□□□ 1.61
VPS36-203ENST00000475375 PORCNQ9H237 461 aa25.08■■□□□ 1.61
VPS36-203ENST00000475375 GINM1Q9NU53 330 aa25.08■■□□□ 1.61
VPS36-203ENST00000475375 IPO8O15397 1037 aaKnown RBP25.07■■□□□ 1.6
VPS36-203ENST00000475375 CCND3P30281 292 aaPredicted RBP25.07■■□□□ 1.6
VPS36-203ENST00000475375 PPP4CP60510 307 aa25.07■■□□□ 1.6
VPS36-203ENST00000475375 CCL14Q16627 93 aa25.07■■□□□ 1.6
VPS36-203ENST00000475375 Q3C1V9 767 aa25.07■■□□□ 1.6
VPS36-203ENST00000475375 ATF7IPQ6VMQ6 1270 aa25.07■■□□□ 1.6
VPS36-203ENST00000475375 ADGRA1Q86SQ6 560 aa25.07■■□□□ 1.6
VPS36-203ENST00000475375 FRAT1Q92837 279 aaPredicted RBP25.07■■□□□ 1.6
VPS36-203ENST00000475375 APBA2Q99767 749 aa25.07■■□□□ 1.6
VPS36-203ENST00000475375 SIPA1L1O43166 1804 aa25.07■■□□□ 1.6
VPS36-203ENST00000475375 ZYXQ15942 572 aaKnown RBP25.06■■□□□ 1.6
VPS36-203ENST00000475375 TNNI3KQ59H18 835 aa25.06■■□□□ 1.6
VPS36-203ENST00000475375 USP17L2Q6R6M4 530 aa25.06■■□□□ 1.6
VPS36-203ENST00000475375 FEZ1Q99689 392 aa25.06■■□□□ 1.6
VPS36-203ENST00000475375 DBNDD2Q9BQY9 259 aa25.06■■□□□ 1.6
VPS36-203ENST00000475375 FPGT-TNNI3KV9GXZ4 949 aa25.06■■□□□ 1.6
VPS36-203ENST00000475375 TRIM27P14373 513 aa25.05■■□□□ 1.6
VPS36-203ENST00000475375 MORN1Q5T089 497 aa25.05■■□□□ 1.6
VPS36-203ENST00000475375 WDR78Q5VTH9 848 aa25.05■■□□□ 1.6
VPS36-203ENST00000475375 METTL16Q86W50 562 aaKnown RBP25.05■■□□□ 1.6
VPS36-203ENST00000475375 USP6NLQ92738 828 aa25.05■■□□□ 1.6
VPS36-203ENST00000475375 CLUAP1Q96AJ1 413 aa25.05■■□□□ 1.6
VPS36-203ENST00000475375 EMILIN3Q9NT22 766 aa25.05■■□□□ 1.6
VPS36-203ENST00000475375 STXBP5LQ9Y2K9 1186 aa25.05■■□□□ 1.6
VPS36-203ENST00000475375 MAST2Q6P0Q8 1798 aa25.05■■□□□ 1.6
VPS36-203ENST00000475375 CUL9Q8IWT3 2517 aa25.05■■□□□ 1.6
VPS36-203ENST00000475375 GH2P01242 217 aa25.04■■□□□ 1.6
VPS36-203ENST00000475375 CYP2E1P05181 493 aaPredicted RBP25.04■■□□□ 1.6
VPS36-203ENST00000475375 COL6A1P12109 1028 aa25.04■■□□□ 1.6
VPS36-203ENST00000475375 MDM2Q00987 491 aaPredicted RBP25.04■■□□□ 1.6
VPS36-203ENST00000475375 LRRC26Q2I0M4 334 aa25.04■■□□□ 1.6
VPS36-203ENST00000475375 TNNQ9UQP3 1299 aa25.04■■□□□ 1.6
VPS36-203ENST00000475375 GLRX3O76003 335 aaKnown RBP25.03■■□□□ 1.6
VPS36-203ENST00000475375 DYNLL1P63167 89 aaKnown RBP25.03■■□□□ 1.6
VPS36-203ENST00000475375 GPR108Q9NPR9 543 aa25.03■■□□□ 1.6
VPS36-203ENST00000475375 MTMR10Q9NXD2 777 aa25.03■■□□□ 1.6
VPS36-203ENST00000475375 NDUFB9Q9Y6M9 179 aa25.03■■□□□ 1.6
VPS36-203ENST00000475375 CYP7A1P22680 504 aa25.02■■□□□ 1.6
VPS36-203ENST00000475375 ZAP70P43403 619 aa25.02■■□□□ 1.6
VPS36-203ENST00000475375 CCNA1P78396 465 aa25.02■■□□□ 1.6
VPS36-203ENST00000475375 MAP2K5Q13163 448 aa25.02■■□□□ 1.6
VPS36-203ENST00000475375 MFSD14CQ5VZR4 134 aa25.02■■□□□ 1.6
VPS36-203ENST00000475375 LHX8Q68G74 356 aa25.02■■□□□ 1.6
VPS36-203ENST00000475375 PIH1D3Q9NQM4 214 aaKnown RBP25.02■■□□□ 1.6
VPS36-203ENST00000475375 EDC3Q96F86 508 aaKnown RBP25.01■■□□□ 1.59
VPS36-203ENST00000475375 RABGAP1Q9Y3P9 1069 aa25.01■■□□□ 1.59
VPS36-203ENST00000475375 USP17L15C9J2P7 530 aa25■■□□□ 1.59
VPS36-203ENST00000475375 USP17L13C9JLJ4 530 aa25■■□□□ 1.59
VPS36-203ENST00000475375 USP17L11C9JVI0 530 aa25■■□□□ 1.59
VPS36-203ENST00000475375 USP17L18D6R9N7 530 aa25■■□□□ 1.59
VPS36-203ENST00000475375 USP17L22D6RA61 530 aa25■■□□□ 1.59
VPS36-203ENST00000475375 USP17L17D6RBQ6 530 aa25■■□□□ 1.59
VPS36-203ENST00000475375 USP17L19D6RCP7 530 aa25■■□□□ 1.59
VPS36-203ENST00000475375 USP17L20D6RJB6 530 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms