RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 MFSD14CQ5VZR4 134 aa17.52■□□□□ 0.4
ATG9A-220ENST00000475339 PLEKHH3Q7Z736 793 aa17.52■□□□□ 0.4
ATG9A-220ENST00000475339 TIFAQ96CG3 184 aa17.52■□□□□ 0.4
ATG9A-220ENST00000475339 SUCLG2Q96I99 432 aa17.52■□□□□ 0.4
ATG9A-220ENST00000475339 GAS2L1Q99501 681 aaPredicted RBP17.52■□□□□ 0.4
ATG9A-220ENST00000475339 RFX7Q2KHR2 1363 aa17.52■□□□□ 0.39
ATG9A-220ENST00000475339 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.51■□□□□ 0.39
ATG9A-220ENST00000475339 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.51■□□□□ 0.39
ATG9A-220ENST00000475339 MSCO60682 206 aa17.51■□□□□ 0.39
ATG9A-220ENST00000475339 HERVK_113P62684 666 aa17.51■□□□□ 0.39
ATG9A-220ENST00000475339 ALYREFQ86V81 257 aaKnown RBP17.51■□□□□ 0.39
ATG9A-220ENST00000475339 CDCA7LQ96GN5 454 aa17.51■□□□□ 0.39
ATG9A-220ENST00000475339 KIF16BQ96L93 1317 aa17.5■□□□□ 0.39
ATG9A-220ENST00000475339 TCF20Q9UGU0 1960 aaKnown RBP17.5■□□□□ 0.39
ATG9A-220ENST00000475339 FGFR2P21802 821 aa17.5■□□□□ 0.39
ATG9A-220ENST00000475339 ERVK-9P63128 1117 aa17.5■□□□□ 0.39
ATG9A-220ENST00000475339 ERVK-24P63145 666 aa17.5■□□□□ 0.39
ATG9A-220ENST00000475339 MAP2K5Q13163 448 aa17.5■□□□□ 0.39
ATG9A-220ENST00000475339 SNX17Q15036 470 aa17.5■□□□□ 0.39
ATG9A-220ENST00000475339 PUM3Q15397 648 aaKnown RBP17.5■□□□□ 0.39
ATG9A-220ENST00000475339 EDC3Q96F86 508 aaKnown RBP17.5■□□□□ 0.39
ATG9A-220ENST00000475339 SNX27Q96L92 541 aa17.5■□□□□ 0.39
ATG9A-220ENST00000475339 OSBPL5Q9H0X9 879 aaPredicted RBP17.5■□□□□ 0.39
ATG9A-220ENST00000475339 PRDM12Q9H4Q4 367 aa17.5■□□□□ 0.39
ATG9A-220ENST00000475339 EPHX3Q9H6B9 360 aa17.5■□□□□ 0.39
ATG9A-220ENST00000475339 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.5■□□□□ 0.39
ATG9A-220ENST00000475339 NDUFB9Q9Y6M9 179 aa17.5■□□□□ 0.39
ATG9A-220ENST00000475339 RLFQ13129 1914 aa17.5■□□□□ 0.39
ATG9A-220ENST00000475339 TBC1D12O60347 775 aa17.49■□□□□ 0.39
ATG9A-220ENST00000475339 HOXA7P31268 230 aaPredicted RBP17.49■□□□□ 0.39
ATG9A-220ENST00000475339 RRP1BQ14684 758 aaKnown RBP17.49■□□□□ 0.39
ATG9A-220ENST00000475339 TRPV1Q8NER1 839 aa17.49■□□□□ 0.39
ATG9A-220ENST00000475339 KLHDC4Q8TBB5 520 aa17.49■□□□□ 0.39
ATG9A-220ENST00000475339 PAGR1Q9BTK6 254 aa17.49■□□□□ 0.39
ATG9A-220ENST00000475339 UTYO14607 1347 aa17.48■□□□□ 0.39
ATG9A-220ENST00000475339 USP17L5A8MUK1 530 aa17.48■□□□□ 0.39
ATG9A-220ENST00000475339 MYCNP04198 464 aaPredicted RBP17.48■□□□□ 0.39
ATG9A-220ENST00000475339 CYP2C19P33261 490 aa17.48■□□□□ 0.39
ATG9A-220ENST00000475339 MTMR2Q13614 643 aa17.48■□□□□ 0.39
ATG9A-220ENST00000475339 ADGRE1Q14246 886 aa17.48■□□□□ 0.39
ATG9A-220ENST00000475339 ARRDC4Q8NCT1 418 aa17.48■□□□□ 0.39
ATG9A-220ENST00000475339 TBC1D2Q9BYX2 928 aa17.48■□□□□ 0.39
ATG9A-220ENST00000475339 CWC22Q9HCG8 908 aaKnown RBP17.48■□□□□ 0.39
ATG9A-220ENST00000475339 KBTBD13C9JR72 458 aa17.47■□□□□ 0.39
ATG9A-220ENST00000475339 BMP1P13497 986 aa17.47■□□□□ 0.39
ATG9A-220ENST00000475339 CAP2P40123 477 aa17.47■□□□□ 0.39
ATG9A-220ENST00000475339 TLE2Q04725 743 aa17.47■□□□□ 0.39
ATG9A-220ENST00000475339 ANO1Q5XXA6 986 aa17.47■□□□□ 0.39
ATG9A-220ENST00000475339 FERMT2Q96AC1 680 aa17.47■□□□□ 0.39
ATG9A-220ENST00000475339 TMOD4Q9NZQ9 345 aa17.47■□□□□ 0.39
ATG9A-220ENST00000475339 GAKO14976 1311 aa17.47■□□□□ 0.39
ATG9A-220ENST00000475339 NBPF7P0C2Y1 421 aaPredicted RBP17.46■□□□□ 0.39
ATG9A-220ENST00000475339 IGFBP4P22692 258 aa17.46■□□□□ 0.39
ATG9A-220ENST00000475339 PBX2P40425 430 aa17.46■□□□□ 0.39
ATG9A-220ENST00000475339 ADCYAP1R1P41586 468 aa17.46■□□□□ 0.39
ATG9A-220ENST00000475339 BACE1P56817 501 aa17.46■□□□□ 0.39
ATG9A-220ENST00000475339 ATP2B2Q01814 1243 aa17.46■□□□□ 0.39
ATG9A-220ENST00000475339 BICC1Q9H694 974 aaKnown RBP17.46■□□□□ 0.39
ATG9A-220ENST00000475339 AS3MTQ9HBK9 375 aa17.46■□□□□ 0.39
ATG9A-220ENST00000475339 SLC5A1P13866 664 aa17.45■□□□□ 0.38
ATG9A-220ENST00000475339 TMEM31Q5JXX7 168 aa17.45■□□□□ 0.38
ATG9A-220ENST00000475339 TACC3Q9Y6A5 838 aa17.45■□□□□ 0.38
ATG9A-220ENST00000475339 XIRP2A4UGR9 3374 aa17.45■□□□□ 0.38
ATG9A-220ENST00000475339 MYH13Q9UKX3 1938 aa17.45■□□□□ 0.38
ATG9A-220ENST00000475339 CT47B1P0C2W7 299 aaPredicted RBP17.44■□□□□ 0.38
ATG9A-220ENST00000475339 RAG1P15918 1043 aa17.44■□□□□ 0.38
ATG9A-220ENST00000475339 BTDP43251 543 aa17.44■□□□□ 0.38
ATG9A-220ENST00000475339 TFF2Q03403 129 aa17.44■□□□□ 0.38
ATG9A-220ENST00000475339 FPGSQ05932 587 aa17.44■□□□□ 0.38
ATG9A-220ENST00000475339 RABL6Q3YEC7 729 aaPredicted RBP17.44■□□□□ 0.38
ATG9A-220ENST00000475339 WDR78Q5VTH9 848 aa17.44■□□□□ 0.38
ATG9A-220ENST00000475339 C1orf53Q5VUE5 145 aa17.44■□□□□ 0.38
ATG9A-220ENST00000475339 TRMT2AQ8IZ69 625 aaKnown RBP17.44■□□□□ 0.38
ATG9A-220ENST00000475339 NPLOC4Q8TAT6 608 aa17.44■□□□□ 0.38
ATG9A-220ENST00000475339 LPIN2Q92539 896 aa17.44■□□□□ 0.38
ATG9A-220ENST00000475339 WDR18Q9BV38 432 aa17.44■□□□□ 0.38
ATG9A-220ENST00000475339 SALL1Q9NSC2 1324 aa17.44■□□□□ 0.38
ATG9A-220ENST00000475339 GRXCR1A8MXD5 290 aa17.43■□□□□ 0.38
ATG9A-220ENST00000475339 ALDH1L1O75891 902 aa17.43■□□□□ 0.38
ATG9A-220ENST00000475339 CLTBP09497 229 aa17.43■□□□□ 0.38
ATG9A-220ENST00000475339 CYBAP13498 195 aa17.43■□□□□ 0.38
ATG9A-220ENST00000475339 SLC4A10Q6U841 1118 aa17.43■□□□□ 0.38
ATG9A-220ENST00000475339 ANKRD44Q8N8A2 993 aa17.43■□□□□ 0.38
ATG9A-220ENST00000475339 PBX4Q9BYU1 374 aa17.43■□□□□ 0.38
ATG9A-220ENST00000475339 SMC4Q9NTJ3 1288 aa17.43■□□□□ 0.38
ATG9A-220ENST00000475339 CXXC1Q9P0U4 656 aaPredicted RBP17.43■□□□□ 0.38
ATG9A-220ENST00000475339 MYH2Q9UKX2 1941 aa17.43■□□□□ 0.38
ATG9A-220ENST00000475339 SLC15A5A6NIM6 579 aa17.42■□□□□ 0.38
ATG9A-220ENST00000475339 KIAA0355O15063 1070 aa17.42■□□□□ 0.38
ATG9A-220ENST00000475339 GLRX3O76003 335 aaKnown RBP17.42■□□□□ 0.38
ATG9A-220ENST00000475339 HOXC6P09630 235 aa17.42■□□□□ 0.38
ATG9A-220ENST00000475339 PTPREP23469 700 aa17.42■□□□□ 0.38
ATG9A-220ENST00000475339 CCDC129Q6ZRS4 1044 aa17.42■□□□□ 0.38
ATG9A-220ENST00000475339 ZBED9Q6R2W3 1325 aa17.42■□□□□ 0.38
ATG9A-220ENST00000475339 KCNQ1P51787 676 aa17.41■□□□□ 0.38
ATG9A-220ENST00000475339 RHBDL3P58872 404 aa17.41■□□□□ 0.38
ATG9A-220ENST00000475339 ALDH1L2Q3SY69 923 aa17.41■□□□□ 0.38
ATG9A-220ENST00000475339 DZIP1Q86YF9 867 aaKnown RBP17.41■□□□□ 0.38
ATG9A-220ENST00000475339 GTF3C2Q8WUA4 911 aaPredicted RBP17.41■□□□□ 0.38
ATG9A-220ENST00000475339 SSH1Q8WYL5 1049 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms