RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 IFIT1BQ5T764 474 aaKnown RBP12.14□□□□□ -0.47
COL12A1-206ENST00000474564 CPLX2Q6PUV4 134 aaKnown RBP12.14□□□□□ -0.47
COL12A1-206ENST00000474564 STOX1Q6ZVD7 989 aa12.14□□□□□ -0.47
COL12A1-206ENST00000474564 TMEM179Q6ZVK1 233 aa12.14□□□□□ -0.47
COL12A1-206ENST00000474564 CATIPQ7Z7H3 387 aa12.14□□□□□ -0.47
COL12A1-206ENST00000474564 DGKHQ86XP1 1220 aa12.14□□□□□ -0.47
COL12A1-206ENST00000474564 MB21D2Q8IYB1 491 aaPredicted RBP12.14□□□□□ -0.47
COL12A1-206ENST00000474564 FBXL16Q8N461 479 aa12.14□□□□□ -0.47
COL12A1-206ENST00000474564 NEDD1Q8NHV4 660 aa12.14□□□□□ -0.47
COL12A1-206ENST00000474564 ZNF526Q8TF50 670 aaPredicted RBP12.14□□□□□ -0.47
COL12A1-206ENST00000474564 KAT14Q9H8E8 782 aa12.14□□□□□ -0.47
COL12A1-206ENST00000474564 KANSL2Q9H9L4 492 aa12.14□□□□□ -0.47
COL12A1-206ENST00000474564 GPBP1L1Q9HC44 474 aaPredicted RBP12.14□□□□□ -0.47
COL12A1-206ENST00000474564 TCP11L1Q9NUJ3 509 aa12.14□□□□□ -0.47
COL12A1-206ENST00000474564 PGAP2Q9UHJ9 254 aa12.14□□□□□ -0.47
COL12A1-206ENST00000474564 SLC12A7Q9Y666 1083 aa12.14□□□□□ -0.47
COL12A1-206ENST00000474564 CNTNAP1P78357 1384 aa12.14□□□□□ -0.47
COL12A1-206ENST00000474564 NAV1Q8NEY1 1877 aa12.13□□□□□ -0.47
COL12A1-206ENST00000474564 CCDC196A0A1B0GTZ2 297 aa12.13□□□□□ -0.47
COL12A1-206ENST00000474564 K7ELQ4 463 aaPredicted RBP12.13□□□□□ -0.47
COL12A1-206ENST00000474564 RASA1P20936 1047 aa12.13□□□□□ -0.47
COL12A1-206ENST00000474564 IREB2P48200 963 aaKnown RBP12.13□□□□□ -0.47
COL12A1-206ENST00000474564 AK2P54819 239 aa12.13□□□□□ -0.47
COL12A1-206ENST00000474564 TTLL12Q14166 644 aaPredicted RBP12.13□□□□□ -0.47
COL12A1-206ENST00000474564 PPP2R5BQ15173 497 aa12.13□□□□□ -0.47
COL12A1-206ENST00000474564 FAM47AQ5JRC9 791 aa12.13□□□□□ -0.47
COL12A1-206ENST00000474564 TATDN1Q6P1N9 297 aa12.13□□□□□ -0.47
COL12A1-206ENST00000474564 MIGA2Q7L4E1 593 aa12.13□□□□□ -0.47
COL12A1-206ENST00000474564 CHST3Q7LGC8 479 aa12.13□□□□□ -0.47
COL12A1-206ENST00000474564 ARMC9Q7Z3E5 817 aa12.13□□□□□ -0.47
COL12A1-206ENST00000474564 METTL16Q86W50 562 aaKnown RBP12.13□□□□□ -0.47
COL12A1-206ENST00000474564 BRF1Q92994 677 aa12.13□□□□□ -0.47
COL12A1-206ENST00000474564 NBPF3Q9H094 633 aa12.13□□□□□ -0.47
COL12A1-206ENST00000474564 SLKQ9H2G2 1235 aaPredicted RBP12.13□□□□□ -0.47
COL12A1-206ENST00000474564 SH2D4AQ9H788 454 aa12.13□□□□□ -0.47
COL12A1-206ENST00000474564 PICK1Q9NRD5 415 aa12.13□□□□□ -0.47
COL12A1-206ENST00000474564 SCN4AP35499 1836 aa12.13□□□□□ -0.47
COL12A1-206ENST00000474564 CTNND1O60716 968 aaKnown RBP12.12□□□□□ -0.47
COL12A1-206ENST00000474564 ASNSP08243 561 aa12.12□□□□□ -0.47
COL12A1-206ENST00000474564 CPA1P15085 419 aa12.12□□□□□ -0.47
COL12A1-206ENST00000474564 NOL8Q76FK4 1167 aaKnown RBP12.12□□□□□ -0.47
COL12A1-206ENST00000474564 SH3BP5LQ7L8J4 393 aa12.12□□□□□ -0.47
COL12A1-206ENST00000474564 SLC44A5Q8NCS7 719 aa12.12□□□□□ -0.47
COL12A1-206ENST00000474564 ZNF274Q96GC6 653 aaPredicted RBP12.12□□□□□ -0.47
COL12A1-206ENST00000474564 ARHGEF10LQ9HCE6 1279 aa12.12□□□□□ -0.47
COL12A1-206ENST00000474564 INCENPQ9NQS7 918 aa12.12□□□□□ -0.47
COL12A1-206ENST00000474564 STX8Q9UNK0 236 aa12.12□□□□□ -0.47
COL12A1-206ENST00000474564 KIF3AQ9Y496 699 aa12.12□□□□□ -0.47
COL12A1-206ENST00000474564 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.12□□□□□ -0.47
COL12A1-206ENST00000474564 TAF6LQ9Y6J9 622 aa12.12□□□□□ -0.47
COL12A1-206ENST00000474564 ASTN2O75129 1339 aaPredicted RBP12.11□□□□□ -0.47
COL12A1-206ENST00000474564 TNKSO95271 1327 aa12.11□□□□□ -0.47
COL12A1-206ENST00000474564 WDR90Q96KV7 1748 aa12.11□□□□□ -0.47
COL12A1-206ENST00000474564 ECM29Q5VYK3 1845 aa12.11□□□□□ -0.47
COL12A1-206ENST00000474564 MYH1P12882 1939 aa12.11□□□□□ -0.47
COL12A1-206ENST00000474564 CPLX1O14810 134 aa12.11□□□□□ -0.47
COL12A1-206ENST00000474564 TTLL1O95922 423 aa12.11□□□□□ -0.47
COL12A1-206ENST00000474564 TOP1P11387 765 aaKnown RBP12.11□□□□□ -0.47
COL12A1-206ENST00000474564 KIF5BP33176 963 aa12.11□□□□□ -0.47
COL12A1-206ENST00000474564 SHMT1P34896 483 aa12.11□□□□□ -0.47
COL12A1-206ENST00000474564 ATP2B2Q01814 1243 aa12.11□□□□□ -0.47
COL12A1-206ENST00000474564 MAP3K10Q02779 954 aa12.11□□□□□ -0.47
COL12A1-206ENST00000474564 RAB3GAP1Q15042 981 aa12.11□□□□□ -0.47
COL12A1-206ENST00000474564 NBPF12Q5TAG4 269 aaPredicted RBP12.11□□□□□ -0.47
COL12A1-206ENST00000474564 CYB5R4Q7L1T6 521 aa12.11□□□□□ -0.47
COL12A1-206ENST00000474564 ZKSCAN3Q9BRR0 538 aa12.11□□□□□ -0.47
COL12A1-206ENST00000474564 TBC1D2Q9BYX2 928 aa12.11□□□□□ -0.47
COL12A1-206ENST00000474564 AS3MTQ9HBK9 375 aa12.11□□□□□ -0.47
COL12A1-206ENST00000474564 CSADQ9Y600 493 aa12.11□□□□□ -0.47
COL12A1-206ENST00000474564 LAMA4Q16363 1823 aa12.11□□□□□ -0.47
COL12A1-206ENST00000474564 BAZ2AQ9UIF9 1905 aaKnown RBP12.1□□□□□ -0.47
COL12A1-206ENST00000474564 KLF18A0A0U1RQI7 1052 aa12.1□□□□□ -0.47
COL12A1-206ENST00000474564 SH2B2O14492 632 aaPredicted RBP12.1□□□□□ -0.47
COL12A1-206ENST00000474564 ZBTB43O43298 467 aa12.1□□□□□ -0.47
COL12A1-206ENST00000474564 CDKL5O76039 1030 aa12.1□□□□□ -0.47
COL12A1-206ENST00000474564 CAP2P40123 477 aa12.1□□□□□ -0.47
COL12A1-206ENST00000474564 SLC4A3P48751 1232 aa12.1□□□□□ -0.47
COL12A1-206ENST00000474564 RCAN1P53805 252 aa12.1□□□□□ -0.47
COL12A1-206ENST00000474564 CTCFLQ8NI51 663 aaPredicted RBP12.1□□□□□ -0.47
COL12A1-206ENST00000474564 IGDCC4Q8TDY8 1250 aa12.1□□□□□ -0.47
COL12A1-206ENST00000474564 TCEANC2Q96MN5 208 aa12.1□□□□□ -0.47
COL12A1-206ENST00000474564 TEPSINQ96N21 525 aa12.1□□□□□ -0.47
COL12A1-206ENST00000474564 LRRC2Q9BYS8 371 aa12.1□□□□□ -0.47
COL12A1-206ENST00000474564 ADAMTSL1Q8N6G6 1762 aa12.1□□□□□ -0.47
COL12A1-206ENST00000474564 FOCADQ5VW36 1801 aa12.09□□□□□ -0.47
COL12A1-206ENST00000474564 GOLGA8BA8MQT2 603 aa12.09□□□□□ -0.47
COL12A1-206ENST00000474564 POTECB2RU33 542 aa12.09□□□□□ -0.47
COL12A1-206ENST00000474564 ADM5C9JUS6 153 aa12.09□□□□□ -0.47
COL12A1-206ENST00000474564 DDAH1O94760 285 aa12.09□□□□□ -0.47
COL12A1-206ENST00000474564 GH2P01242 217 aa12.09□□□□□ -0.47
COL12A1-206ENST00000474564 AKR1B1P15121 316 aa12.09□□□□□ -0.47
COL12A1-206ENST00000474564 GNAQP50148 359 aa12.09□□□□□ -0.47
COL12A1-206ENST00000474564 ANTXR2P58335 489 aa12.09□□□□□ -0.47
COL12A1-206ENST00000474564 MAP3K9P80192 1104 aa12.09□□□□□ -0.47
COL12A1-206ENST00000474564 ICA1Q05084 483 aa12.09□□□□□ -0.47
COL12A1-206ENST00000474564 APOBRQ0VD83 1088 aa12.09□□□□□ -0.47
COL12A1-206ENST00000474564 CHADLQ6NUI6 762 aa12.09□□□□□ -0.47
COL12A1-206ENST00000474564 SGMS1Q86VZ5 419 aa12.09□□□□□ -0.47
COL12A1-206ENST00000474564 C2orf69Q8N8R5 385 aa12.09□□□□□ -0.47
COL12A1-206ENST00000474564 ENAHQ8N8S7 591 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms