RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 UBE2FQ969M7 185 aa4.65□□□□□ -1.67
CCDC39-203ENST00000473854 CCDC74AQ96AQ1 378 aa4.65□□□□□ -1.67
CCDC39-203ENST00000473854 MCOLN1Q9GZU1 580 aa4.65□□□□□ -1.67
CCDC39-203ENST00000473854 CWC22Q9HCG8 908 aaKnown RBP4.65□□□□□ -1.67
CCDC39-203ENST00000473854 CACNA2D2Q9NY47 1150 aa4.65□□□□□ -1.67
CCDC39-203ENST00000473854 KCTD3Q9Y597 815 aa4.65□□□□□ -1.67
CCDC39-203ENST00000473854 TRIM37O94972 964 aa4.64□□□□□ -1.67
CCDC39-203ENST00000473854 NTF4P34130 210 aa4.64□□□□□ -1.67
CCDC39-203ENST00000473854 HK2P52789 917 aa4.64□□□□□ -1.67
CCDC39-203ENST00000473854 FGD1P98174 961 aa4.64□□□□□ -1.67
CCDC39-203ENST00000473854 RING1Q06587 406 aa4.64□□□□□ -1.67
CCDC39-203ENST00000473854 ZNF252P-AS1Q0IIN9 211 aa4.64□□□□□ -1.67
CCDC39-203ENST00000473854 GRM2Q14416 872 aa4.64□□□□□ -1.67
CCDC39-203ENST00000473854 SKOR2Q2VWA4 1001 aaPredicted RBP4.64□□□□□ -1.67
CCDC39-203ENST00000473854 GGNQ86UU5 652 aa4.64□□□□□ -1.67
CCDC39-203ENST00000473854 OXR1Q8N573 874 aa4.64□□□□□ -1.67
CCDC39-203ENST00000473854 PDZD8Q8NEN9 1154 aa4.64□□□□□ -1.67
CCDC39-203ENST00000473854 CITED4Q96RK1 184 aa4.64□□□□□ -1.67
CCDC39-203ENST00000473854 CBX8Q9HC52 389 aa4.64□□□□□ -1.67
CCDC39-203ENST00000473854 DNAJC25-GNG10A0A024R161 153 aa4.63□□□□□ -1.67
CCDC39-203ENST00000473854 PRR33A8MZF0 331 aa4.63□□□□□ -1.67
CCDC39-203ENST00000473854 TRIM13O60858 407 aa4.63□□□□□ -1.67
CCDC39-203ENST00000473854 SLITRK5O94991 958 aa4.63□□□□□ -1.67
CCDC39-203ENST00000473854 ABL1P00519 1130 aa4.63□□□□□ -1.67
CCDC39-203ENST00000473854 IGHA2P01877 340 aa4.63□□□□□ -1.67
CCDC39-203ENST00000473854 CAP2P40123 477 aa4.63□□□□□ -1.67
CCDC39-203ENST00000473854 FCGRTP55899 365 aa4.63□□□□□ -1.67
CCDC39-203ENST00000473854 NFKB2Q00653 900 aa4.63□□□□□ -1.67
CCDC39-203ENST00000473854 ZXDCQ2QGD7 858 aaPredicted RBP4.63□□□□□ -1.67
CCDC39-203ENST00000473854 SPATS1Q496A3 300 aa4.63□□□□□ -1.67
CCDC39-203ENST00000473854 PIWIL2Q8TC59 973 aaKnown RBP4.63□□□□□ -1.67
CCDC39-203ENST00000473854 ELMO3Q96BJ8 720 aa4.63□□□□□ -1.67
CCDC39-203ENST00000473854 SYTL4Q96C24 671 aaPredicted RBP4.63□□□□□ -1.67
CCDC39-203ENST00000473854 MIPEPQ99797 713 aa4.63□□□□□ -1.67
CCDC39-203ENST00000473854 RNF32Q9H0A6 362 aa4.63□□□□□ -1.67
CCDC39-203ENST00000473854 ZSWIM5Q9P217 1185 aa4.63□□□□□ -1.67
CCDC39-203ENST00000473854 EGFL7Q9UHF1 273 aa4.63□□□□□ -1.67
CCDC39-203ENST00000473854 FITM1A5D6W6 292 aa4.62□□□□□ -1.67
CCDC39-203ENST00000473854 ORC1Q13415 861 aa4.62□□□□□ -1.67
CCDC39-203ENST00000473854 LRRC14Q15048 493 aa4.62□□□□□ -1.67
CCDC39-203ENST00000473854 RALGPS1Q5JS13 557 aa4.62□□□□□ -1.67
CCDC39-203ENST00000473854 ZNF605Q86T29 641 aa4.62□□□□□ -1.67
CCDC39-203ENST00000473854 SP8Q8IXZ3 490 aa4.62□□□□□ -1.67
CCDC39-203ENST00000473854 DHX38Q92620 1227 aaKnown RBP4.62□□□□□ -1.67
CCDC39-203ENST00000473854 XYLT2Q9H1B5 865 aa4.62□□□□□ -1.67
CCDC39-203ENST00000473854 TRIT1Q9H3H1 467 aaKnown RBP4.62□□□□□ -1.67
CCDC39-203ENST00000473854 CSADQ9Y600 493 aa4.62□□□□□ -1.67
CCDC39-203ENST00000473854 DCDC2CA8MYV0 355 aa4.61□□□□□ -1.67
CCDC39-203ENST00000473854 EIF1AYO14602 144 aaKnown RBP4.61□□□□□ -1.67
CCDC39-203ENST00000473854 ERVFC1P60507 584 aa4.61□□□□□ -1.67
CCDC39-203ENST00000473854 SNX17Q15036 470 aa4.61□□□□□ -1.67
CCDC39-203ENST00000473854 NR0B2Q15466 257 aa4.61□□□□□ -1.67
CCDC39-203ENST00000473854 C12orf40Q86WS4 652 aa4.61□□□□□ -1.67
CCDC39-203ENST00000473854 CCDC97Q96F63 343 aaPredicted RBP4.61□□□□□ -1.67
CCDC39-203ENST00000473854 FAM129BQ96TA1 746 aa4.61□□□□□ -1.67
CCDC39-203ENST00000473854 ZNF552Q9H707 407 aaPredicted RBP4.61□□□□□ -1.67
CCDC39-203ENST00000473854 NLRP2Q9NX02 1062 aa4.61□□□□□ -1.67
CCDC39-203ENST00000473854 MYOCOSA0A1B0GUC4 107 aa4.6□□□□□ -1.67
CCDC39-203ENST00000473854 CBX7O95931 251 aa4.6□□□□□ -1.67
CCDC39-203ENST00000473854 ESR1P03372 595 aa4.6□□□□□ -1.67
CCDC39-203ENST00000473854 KRTAP10-2P60368 255 aa4.6□□□□□ -1.67
CCDC39-203ENST00000473854 CHRNEQ04844 493 aa4.6□□□□□ -1.67
CCDC39-203ENST00000473854 LETMD1Q6P1Q0 360 aa4.6□□□□□ -1.67
CCDC39-203ENST00000473854 UBE3DQ7Z6J8 389 aa4.6□□□□□ -1.67
CCDC39-203ENST00000473854 SPPL2CQ8IUH8 684 aa4.6□□□□□ -1.67
CCDC39-203ENST00000473854 STK35Q8TDR2 534 aa4.6□□□□□ -1.67
CCDC39-203ENST00000473854 INTS4Q96HW7 963 aaKnown RBP4.6□□□□□ -1.67
CCDC39-203ENST00000473854 SIGLEC10Q96LC7 697 aa4.6□□□□□ -1.67
CCDC39-203ENST00000473854 TEPSINQ96N21 525 aa4.6□□□□□ -1.67
CCDC39-203ENST00000473854 CEP44Q9C0F1 390 aa4.6□□□□□ -1.67
CCDC39-203ENST00000473854 YBX2Q9Y2T7 364 aaKnown RBP4.6□□□□□ -1.67
CCDC39-203ENST00000473854 ADAMTS20P59510 1910 aa4.6□□□□□ -1.67
CCDC39-203ENST00000473854 ZC3H12DA2A288 527 aaKnown RBP4.59□□□□□ -1.67
CCDC39-203ENST00000473854 PDE6BP35913 854 aa4.59□□□□□ -1.67
CCDC39-203ENST00000473854 ZNF211Q13398 564 aaPredicted RBP4.59□□□□□ -1.67
CCDC39-203ENST00000473854 LLGL2Q6P1M3 1020 aa4.59□□□□□ -1.67
CCDC39-203ENST00000473854 CREG2Q8IUH2 290 aa4.59□□□□□ -1.67
CCDC39-203ENST00000473854 ADAMTS10Q9H324 1103 aa4.59□□□□□ -1.67
CCDC39-203ENST00000473854 PCDHA4Q9UN74 947 aa4.59□□□□□ -1.67
CCDC39-203ENST00000473854 IRAK3Q9Y616 596 aa4.59□□□□□ -1.67
CCDC39-203ENST00000473854 OTOL1A6NHN0 477 aaPredicted RBP4.58□□□□□ -1.68
CCDC39-203ENST00000473854 HRKO00198 91 aa4.58□□□□□ -1.68
CCDC39-203ENST00000473854 ICMTO60725 284 aa4.58□□□□□ -1.68
CCDC39-203ENST00000473854 AFF3P51826 1226 aaKnown RBP4.58□□□□□ -1.68
CCDC39-203ENST00000473854 TNK2Q07912 1038 aa4.58□□□□□ -1.68
CCDC39-203ENST00000473854 HDXQ7Z353 690 aa4.58□□□□□ -1.68
CCDC39-203ENST00000473854 GLYCTKQ8IVS8 523 aa4.58□□□□□ -1.68
CCDC39-203ENST00000473854 DMRTB1Q96MA1 342 aa4.58□□□□□ -1.68
CCDC39-203ENST00000473854 GCM1Q9NP62 436 aa4.58□□□□□ -1.68
CCDC39-203ENST00000473854 ANO2Q9NQ90 1003 aa4.58□□□□□ -1.68
CCDC39-203ENST00000473854 SERPINA10Q9UK55 444 aa4.58□□□□□ -1.68
CCDC39-203ENST00000473854 AKAP2Q9Y2D5 859 aa4.58□□□□□ -1.68
CCDC39-203ENST00000473854 MYRFQ9Y2G1 1151 aa4.58□□□□□ -1.68
CCDC39-203ENST00000473854 TRHRP34981 398 aaPredicted RBP4.57□□□□□ -1.68
CCDC39-203ENST00000473854 ETV3P41162 512 aa4.57□□□□□ -1.68
CCDC39-203ENST00000473854 EFEMP1Q12805 493 aa4.57□□□□□ -1.68
CCDC39-203ENST00000473854 SLBPQ14493 270 aaKnown RBP eCLIP4.57□□□□□ -1.68
CCDC39-203ENST00000473854 OLFML2BQ68BL8 750 aa4.57□□□□□ -1.68
CCDC39-203ENST00000473854 B4GALNT3Q6L9W6 998 aa4.57□□□□□ -1.68
CCDC39-203ENST00000473854 HID1Q8IV36 788 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms