RNA–Protein interactions for RNA: ENST00000473062.1

CLCC1-208, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-208ENST00000473062 ZNRF3Q9ULT6 936 aa5.36□□□□□ -1.55
CLCC1-208ENST00000473062 EFR3BQ9Y2G0 817 aa5.36□□□□□ -1.55
CLCC1-208ENST00000473062 PCDHB14Q9Y5E9 798 aa5.36□□□□□ -1.55
CLCC1-208ENST00000473062 NFICP08651 508 aa5.35□□□□□ -1.55
CLCC1-208ENST00000473062 ETV3P41162 512 aa5.35□□□□□ -1.55
CLCC1-208ENST00000473062 EIF6P56537 245 aaKnown RBP5.35□□□□□ -1.55
CLCC1-208ENST00000473062 SOGA3Q5TF21 947 aa5.35□□□□□ -1.55
CLCC1-208ENST00000473062 FBXW10Q5XX13 1052 aa5.35□□□□□ -1.55
CLCC1-208ENST00000473062 RNF43Q68DV7 783 aa5.35□□□□□ -1.55
CLCC1-208ENST00000473062 MPRIPQ6WCQ1 1025 aa5.35□□□□□ -1.55
CLCC1-208ENST00000473062 MCATQ8IVS2 390 aaKnown RBP5.35□□□□□ -1.55
CLCC1-208ENST00000473062 SLFN12Q8IYM2 578 aa5.35□□□□□ -1.55
CLCC1-208ENST00000473062 FAM13CQ8NE31 585 aa5.35□□□□□ -1.55
CLCC1-208ENST00000473062 SREK1Q8WXA9 508 aaKnown RBP5.35□□□□□ -1.55
CLCC1-208ENST00000473062 TMEM87BQ96K49 555 aa5.35□□□□□ -1.55
CLCC1-208ENST00000473062 TM9SF2Q99805 663 aa5.35□□□□□ -1.55
CLCC1-208ENST00000473062 SRRTQ9BXP5 876 aaKnown RBP5.35□□□□□ -1.55
CLCC1-208ENST00000473062 C7orf69Q9H7B7 122 aa5.35□□□□□ -1.55
CLCC1-208ENST00000473062 TPSG1Q9NRR2 321 aa5.35□□□□□ -1.55
CLCC1-208ENST00000473062 ATG3Q9NT62 314 aa5.35□□□□□ -1.55
CLCC1-208ENST00000473062 REV1Q9UBZ9 1251 aa5.35□□□□□ -1.55
CLCC1-208ENST00000473062 GTF2IRD1Q9UHL9 959 aa5.35□□□□□ -1.55
CLCC1-208ENST00000473062 R3HCC1Q9Y3T6 440 aaKnown RBP5.35□□□□□ -1.55
CLCC1-208ENST00000473062 MEIS3P2A8K0S8 358 aa5.34□□□□□ -1.55
CLCC1-208ENST00000473062 CST3P01034 146 aaPredicted RBP5.34□□□□□ -1.55
CLCC1-208ENST00000473062 RAG1P15918 1043 aa5.34□□□□□ -1.55
CLCC1-208ENST00000473062 ATF4P18848 351 aaPredicted RBP5.34□□□□□ -1.55
CLCC1-208ENST00000473062 ATP2B1P20020 1258 aa5.34□□□□□ -1.55
CLCC1-208ENST00000473062 DNAJA1P31689 397 aaKnown RBP5.34□□□□□ -1.55
CLCC1-208ENST00000473062 CRKP46108 304 aa5.34□□□□□ -1.55
CLCC1-208ENST00000473062 NASPP49321 788 aaPredicted RBP5.34□□□□□ -1.55
CLCC1-208ENST00000473062 CDPF1Q6NVV7 123 aa5.34□□□□□ -1.55
CLCC1-208ENST00000473062 GK5Q6ZS86 529 aa5.34□□□□□ -1.55
CLCC1-208ENST00000473062 ARMCX6Q7L4S7 300 aa5.34□□□□□ -1.55
CLCC1-208ENST00000473062 TAB3Q8N5C8 712 aaPredicted RBP5.34□□□□□ -1.55
CLCC1-208ENST00000473062 RBBP8NLQ8NC74 664 aaPredicted RBP5.34□□□□□ -1.55
CLCC1-208ENST00000473062 CYB5D2Q8WUJ1 264 aa5.34□□□□□ -1.55
CLCC1-208ENST00000473062 TMEM40Q8WWA1 233 aa5.34□□□□□ -1.55
CLCC1-208ENST00000473062 DHRS1Q96LJ7 313 aa5.34□□□□□ -1.55
CLCC1-208ENST00000473062 GMLQ99445 158 aa5.34□□□□□ -1.55
CLCC1-208ENST00000473062 TANGO6Q9C0B7 1094 aa5.34□□□□□ -1.55
CLCC1-208ENST00000473062 GRIN3BO60391 1043 aa5.33□□□□□ -1.56
CLCC1-208ENST00000473062 NEFMP07197 916 aa5.33□□□□□ -1.56
CLCC1-208ENST00000473062 GRIK1P39086 918 aa5.33□□□□□ -1.56
CLCC1-208ENST00000473062 TNNI2P48788 182 aa5.33□□□□□ -1.56
CLCC1-208ENST00000473062 RNF4P78317 190 aa5.33□□□□□ -1.56
CLCC1-208ENST00000473062 NFIAQ12857 509 aa5.33□□□□□ -1.56
CLCC1-208ENST00000473062 ZAR1Q86SH2 424 aa5.33□□□□□ -1.56
CLCC1-208ENST00000473062 PHACTR4Q8IZ21 702 aa5.33□□□□□ -1.56
CLCC1-208ENST00000473062 C19orf47Q8N9M1 422 aaKnown RBP5.33□□□□□ -1.56
CLCC1-208ENST00000473062 FBXO27Q8NI29 283 aa5.33□□□□□ -1.56
CLCC1-208ENST00000473062 TBC1D32Q96NH3 1257 aa5.33□□□□□ -1.56
CLCC1-208ENST00000473062 HIRIP3Q9BW71 556 aaPredicted RBP5.33□□□□□ -1.56
CLCC1-208ENST00000473062 PRDM10Q9NQV6 1147 aa5.33□□□□□ -1.56
CLCC1-208ENST00000473062 GINM1Q9NU53 330 aa5.33□□□□□ -1.56
CLCC1-208ENST00000473062 PRKAG2Q9UGJ0 569 aa5.33□□□□□ -1.56
CLCC1-208ENST00000473062 KLHL3Q9UH77 587 aa5.33□□□□□ -1.56
CLCC1-208ENST00000473062 POLR3KQ9Y2Y1 108 aaPredicted RBP5.33□□□□□ -1.56
CLCC1-208ENST00000473062 IGLV1-40P01703 118 aa5.32□□□□□ -1.56
CLCC1-208ENST00000473062 PROCP04070 461 aa5.32□□□□□ -1.56
CLCC1-208ENST00000473062 FSTP19883 344 aa5.32□□□□□ -1.56
CLCC1-208ENST00000473062 NTF4P34130 210 aa5.32□□□□□ -1.56
CLCC1-208ENST00000473062 DOC2BQ14184 412 aa5.32□□□□□ -1.56
CLCC1-208ENST00000473062 BBS9Q3SYG4 887 aa5.32□□□□□ -1.56
CLCC1-208ENST00000473062 CDCP2Q5VXM1 449 aa5.32□□□□□ -1.56
CLCC1-208ENST00000473062 INTS3Q68E01 1043 aaKnown RBP5.32□□□□□ -1.56
CLCC1-208ENST00000473062 KRTAP5-3Q6L8H2 238 aa5.32□□□□□ -1.56
CLCC1-208ENST00000473062 ARHGAP27Q6ZUM4 889 aa5.32□□□□□ -1.56
CLCC1-208ENST00000473062 NLRC3Q7RTR2 1065 aa5.32□□□□□ -1.56
CLCC1-208ENST00000473062 CCDC74BQ96LY2 380 aa5.32□□□□□ -1.56
CLCC1-208ENST00000473062 OSBPL1AQ9BXW6 950 aa5.32□□□□□ -1.56
CLCC1-208ENST00000473062 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.32□□□□□ -1.56
CLCC1-208ENST00000473062 STK10O94804 968 aaKnown RBP5.31□□□□□ -1.56
CLCC1-208ENST00000473062 GBP1P32455 592 aa5.31□□□□□ -1.56
CLCC1-208ENST00000473062 NBPF6Q5VWK0 638 aa5.31□□□□□ -1.56
CLCC1-208ENST00000473062 PRAMEF13Q5VWM6 474 aa5.31□□□□□ -1.56
CLCC1-208ENST00000473062 LETMD1Q6P1Q0 360 aa5.31□□□□□ -1.56
CLCC1-208ENST00000473062 OGFOD3Q6PK18 319 aa5.31□□□□□ -1.56
CLCC1-208ENST00000473062 CKAP2LQ8IYA6 745 aa5.31□□□□□ -1.56
CLCC1-208ENST00000473062 ACSF2Q96CM8 615 aaPredicted RBP5.31□□□□□ -1.56
CLCC1-208ENST00000473062 NBPF4Q96M43 638 aa5.31□□□□□ -1.56
CLCC1-208ENST00000473062 DRC1Q96MC2 740 aa5.31□□□□□ -1.56
CLCC1-208ENST00000473062 KRTAP9-8Q9BYQ0 159 aa5.31□□□□□ -1.56
CLCC1-208ENST00000473062 PRDM5Q9NQX1 630 aaPredicted RBP5.31□□□□□ -1.56
CLCC1-208ENST00000473062 PPP1R1BQ9UD71 204 aaPredicted RBP5.31□□□□□ -1.56
CLCC1-208ENST00000473062 TJP2Q9UDY2 1190 aa5.31□□□□□ -1.56
CLCC1-208ENST00000473062 MAPK8IP1Q9UQF2 711 aa5.31□□□□□ -1.56
CLCC1-208ENST00000473062 HMX2A2RU54 273 aa5.3□□□□□ -1.56
CLCC1-208ENST00000473062 GNAT3A8MTJ3 354 aa5.3□□□□□ -1.56
CLCC1-208ENST00000473062 IGF2BP3O00425 579 aaKnown RBP eCLIP5.3□□□□□ -1.56
CLCC1-208ENST00000473062 U2SURPO15042 1029 aaKnown RBP5.3□□□□□ -1.56
CLCC1-208ENST00000473062 DYRK3O43781 588 aa5.3□□□□□ -1.56
CLCC1-208ENST00000473062 FGRP09769 529 aa5.3□□□□□ -1.56
CLCC1-208ENST00000473062 NAT2P11245 290 aa5.3□□□□□ -1.56
CLCC1-208ENST00000473062 GUCY2CP25092 1073 aa5.3□□□□□ -1.56
CLCC1-208ENST00000473062 KIR3DL1P43629 444 aa5.3□□□□□ -1.56
CLCC1-208ENST00000473062 CDK8P49336 464 aa5.3□□□□□ -1.56
CLCC1-208ENST00000473062 CLCQ05315 142 aa5.3□□□□□ -1.56
CLCC1-208ENST00000473062 SLBPQ14493 270 aaKnown RBP eCLIP5.3□□□□□ -1.56
CLCC1-208ENST00000473062 OVOS1Q6IE37 1185 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms