RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 CTR9Q6PD62 1173 aa12.56□□□□□ -0.4
SMARCD3-208ENST00000472789 ZNF589Q86UQ0 364 aaPredicted RBP12.56□□□□□ -0.4
SMARCD3-208ENST00000472789 ERO1BQ86YB8 467 aa12.56□□□□□ -0.4
SMARCD3-208ENST00000472789 SCYL3Q8IZE3 742 aa12.56□□□□□ -0.4
SMARCD3-208ENST00000472789 IFNL3Q8IZI9 196 aa12.56□□□□□ -0.4
SMARCD3-208ENST00000472789 IL27Q8NEV9 243 aa12.56□□□□□ -0.4
SMARCD3-208ENST00000472789 EHD4Q9H223 541 aa12.56□□□□□ -0.4
SMARCD3-208ENST00000472789 EPB41L4AQ9HCS5 686 aaPredicted RBP12.56□□□□□ -0.4
SMARCD3-208ENST00000472789 RBM19Q9Y4C8 960 aaKnown RBP12.56□□□□□ -0.4
SMARCD3-208ENST00000472789 BAZ2AQ9UIF9 1905 aaKnown RBP12.55□□□□□ -0.4
SMARCD3-208ENST00000472789 SPDYE5A6NIY4 337 aa12.55□□□□□ -0.4
SMARCD3-208ENST00000472789 MPHOSPH10O00566 681 aaKnown RBP12.55□□□□□ -0.4
SMARCD3-208ENST00000472789 SEC24BO95487 1268 aa12.55□□□□□ -0.4
SMARCD3-208ENST00000472789 CAP2P40123 477 aa12.55□□□□□ -0.4
SMARCD3-208ENST00000472789 MAP3K10Q02779 954 aa12.55□□□□□ -0.4
SMARCD3-208ENST00000472789 DGKZQ13574 1117 aa12.55□□□□□ -0.4
SMARCD3-208ENST00000472789 C12orf60Q5U649 245 aa12.55□□□□□ -0.4
SMARCD3-208ENST00000472789 VPS53Q5VIR6 699 aa12.55□□□□□ -0.4
SMARCD3-208ENST00000472789 GIMAP6Q6P9H5 292 aa12.55□□□□□ -0.4
SMARCD3-208ENST00000472789 CCDC84Q86UT8 332 aaPredicted RBP12.55□□□□□ -0.4
SMARCD3-208ENST00000472789 SLC44A5Q8NCS7 719 aa12.55□□□□□ -0.4
SMARCD3-208ENST00000472789 DNAJC18Q9H819 358 aa12.55□□□□□ -0.4
SMARCD3-208ENST00000472789 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.55□□□□□ -0.4
SMARCD3-208ENST00000472789 ZHX2Q9Y6X8 837 aa12.55□□□□□ -0.4
SMARCD3-208ENST00000472789 OTOFQ9HC10 1997 aa12.55□□□□□ -0.4
SMARCD3-208ENST00000472789 MKI67P46013 3256 aaKnown RBP12.55□□□□□ -0.4
SMARCD3-208ENST00000472789 ZBTB48P10074 688 aaPredicted RBP12.54□□□□□ -0.4
SMARCD3-208ENST00000472789 GJA5P36382 358 aa12.54□□□□□ -0.4
SMARCD3-208ENST00000472789 RBM25P49756 843 aaKnown RBP12.54□□□□□ -0.4
SMARCD3-208ENST00000472789 RRP1BQ14684 758 aaKnown RBP12.54□□□□□ -0.4
SMARCD3-208ENST00000472789 CERKLQ49MI3 558 aaPredicted RBP12.54□□□□□ -0.4
SMARCD3-208ENST00000472789 NOL9Q5SY16 702 aaKnown RBP12.54□□□□□ -0.4
SMARCD3-208ENST00000472789 TBC1D32Q96NH3 1257 aa12.54□□□□□ -0.4
SMARCD3-208ENST00000472789 USP26Q9BXU7 913 aa12.54□□□□□ -0.4
SMARCD3-208ENST00000472789 CABP5Q9NP86 173 aa12.54□□□□□ -0.4
SMARCD3-208ENST00000472789 PCDH10Q9P2E7 1040 aa12.54□□□□□ -0.4
SMARCD3-208ENST00000472789 SMIM22K7EJ46 135 aa12.53□□□□□ -0.4
SMARCD3-208ENST00000472789 GH2P01242 217 aa12.53□□□□□ -0.4
SMARCD3-208ENST00000472789 SLC3A2P08195 630 aaKnown RBP12.53□□□□□ -0.4
SMARCD3-208ENST00000472789 HSPD1P10809 573 aaKnown RBP12.53□□□□□ -0.4
SMARCD3-208ENST00000472789 PTPRAP18433 802 aa12.53□□□□□ -0.4
SMARCD3-208ENST00000472789 SHMT1P34896 483 aa12.53□□□□□ -0.4
SMARCD3-208ENST00000472789 CDK8P49336 464 aa12.53□□□□□ -0.4
SMARCD3-208ENST00000472789 GTF2A2P52657 109 aa12.53□□□□□ -0.4
SMARCD3-208ENST00000472789 PPATQ06203 517 aa12.53□□□□□ -0.4
SMARCD3-208ENST00000472789 SREBF2Q12772 1141 aa12.53□□□□□ -0.4
SMARCD3-208ENST00000472789 PPIL2Q13356 520 aa12.53□□□□□ -0.4
SMARCD3-208ENST00000472789 ABCB5Q2M3G0 1257 aa12.53□□□□□ -0.4
SMARCD3-208ENST00000472789 SHROOM1Q2M3G4 852 aaPredicted RBP12.53□□□□□ -0.4
SMARCD3-208ENST00000472789 SBK1Q52WX2 424 aa12.53□□□□□ -0.4
SMARCD3-208ENST00000472789 RNF20Q5VTR2 975 aa12.53□□□□□ -0.4
SMARCD3-208ENST00000472789 METTL16Q86W50 562 aaKnown RBP12.53□□□□□ -0.4
SMARCD3-208ENST00000472789 MKNK2Q9HBH9 465 aa12.53□□□□□ -0.4
SMARCD3-208ENST00000472789 SWAP70Q9UH65 585 aa12.53□□□□□ -0.4
SMARCD3-208ENST00000472789 HTTP42858 3142 aa12.52□□□□□ -0.4
SMARCD3-208ENST00000472789 CCL15-CCL14A0A0B4J2E2 113 aa12.52□□□□□ -0.41
SMARCD3-208ENST00000472789 MANSC4A6NHS7 340 aaPredicted RBP12.52□□□□□ -0.41
SMARCD3-208ENST00000472789 TRIM75PA6NK02 468 aa12.52□□□□□ -0.41
SMARCD3-208ENST00000472789 USP17L5A8MUK1 530 aa12.52□□□□□ -0.41
SMARCD3-208ENST00000472789 IRF6O14896 467 aa12.52□□□□□ -0.41
SMARCD3-208ENST00000472789 ASNSP08243 561 aa12.52□□□□□ -0.41
SMARCD3-208ENST00000472789 GABPAQ06546 454 aa12.52□□□□□ -0.41
SMARCD3-208ENST00000472789 PPARAQ07869 468 aa12.52□□□□□ -0.41
SMARCD3-208ENST00000472789 SNAPC2Q13487 334 aa12.52□□□□□ -0.41
SMARCD3-208ENST00000472789 RAB3GAP1Q15042 981 aa12.52□□□□□ -0.41
SMARCD3-208ENST00000472789 CCL15Q16663 113 aa12.52□□□□□ -0.41
SMARCD3-208ENST00000472789 C16orf86Q6ZW13 317 aa12.52□□□□□ -0.41
SMARCD3-208ENST00000472789 TOMM22Q9NS69 142 aa12.52□□□□□ -0.41
SMARCD3-208ENST00000472789 ZBTB21Q9ULJ3 1066 aa12.52□□□□□ -0.41
SMARCD3-208ENST00000472789 SIPA1L1O43166 1804 aa12.52□□□□□ -0.41
SMARCD3-208ENST00000472789 CENPFP49454 3210 aa12.52□□□□□ -0.41
SMARCD3-208ENST00000472789 DDX60LQ5H9U9 1706 aaKnown RBP12.51□□□□□ -0.41
SMARCD3-208ENST00000472789 FOXP2O15409 715 aa12.51□□□□□ -0.41
SMARCD3-208ENST00000472789 PRDM1O75626 825 aa12.51□□□□□ -0.41
SMARCD3-208ENST00000472789 FGAP02671 866 aa12.51□□□□□ -0.41
SMARCD3-208ENST00000472789 CETPP11597 493 aa12.51□□□□□ -0.41
SMARCD3-208ENST00000472789 ZKSCAN1P17029 563 aaPredicted RBP12.51□□□□□ -0.41
SMARCD3-208ENST00000472789 ANAPC15P60006 121 aa12.51□□□□□ -0.41
SMARCD3-208ENST00000472789 HAND2P61296 217 aa12.51□□□□□ -0.41
SMARCD3-208ENST00000472789 JAG1P78504 1218 aa12.51□□□□□ -0.41
SMARCD3-208ENST00000472789 CTDSPL2Q05D32 466 aa12.51□□□□□ -0.41
SMARCD3-208ENST00000472789 PDE4BQ07343 736 aa12.51□□□□□ -0.41
SMARCD3-208ENST00000472789 TATDN1Q6P1N9 297 aa12.51□□□□□ -0.41
SMARCD3-208ENST00000472789 REM2Q8IYK8 340 aaPredicted RBP12.51□□□□□ -0.41
SMARCD3-208ENST00000472789 IL25Q9H293 177 aa12.51□□□□□ -0.41
SMARCD3-208ENST00000472789 AS3MTQ9HBK9 375 aa12.51□□□□□ -0.41
SMARCD3-208ENST00000472789 ZNF287Q9HBT7 754 aa12.51□□□□□ -0.41
SMARCD3-208ENST00000472789 CTNNA3Q9UI47 895 aa12.51□□□□□ -0.41
SMARCD3-208ENST00000472789 U3KPZ7 1027 aaPredicted RBP12.51□□□□□ -0.41
SMARCD3-208ENST00000472789 AKR1B1P15121 316 aa12.5□□□□□ -0.41
SMARCD3-208ENST00000472789 SPP2Q13103 211 aa12.5□□□□□ -0.41
SMARCD3-208ENST00000472789 ALX1Q15699 326 aa12.5□□□□□ -0.41
SMARCD3-208ENST00000472789 OTUD7BQ6GQQ9 843 aa12.5□□□□□ -0.41
SMARCD3-208ENST00000472789 GADL1Q6ZQY3 521 aa12.5□□□□□ -0.41
SMARCD3-208ENST00000472789 ZNF444Q8N0Y2 327 aaPredicted RBP12.5□□□□□ -0.41
SMARCD3-208ENST00000472789 MAP4K1Q92918 833 aa12.5□□□□□ -0.41
SMARCD3-208ENST00000472789 CCDC17Q96LX7 622 aa12.5□□□□□ -0.41
SMARCD3-208ENST00000472789 FEZ1Q99689 392 aa12.5□□□□□ -0.41
SMARCD3-208ENST00000472789 DSCC1Q9BVC3 393 aa12.5□□□□□ -0.41
SMARCD3-208ENST00000472789 GINM1Q9NU53 330 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms