RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 COPRSQ9NQ92 184 aa6.91□□□□□ -1.3
COL9A1-206ENST00000470652 DCAF1Q9Y4B6 1507 aa6.91□□□□□ -1.3
COL9A1-206ENST00000470652 LEFTY1O75610 366 aa6.9□□□□□ -1.3
COL9A1-206ENST00000470652 F13A1P00488 732 aa6.9□□□□□ -1.3
COL9A1-206ENST00000470652 FAM160A1Q05DH4 1040 aa6.9□□□□□ -1.3
COL9A1-206ENST00000470652 ARMCX6Q7L4S7 300 aa6.9□□□□□ -1.3
COL9A1-206ENST00000470652 UBE3DQ7Z6J8 389 aa6.9□□□□□ -1.3
COL9A1-206ENST00000470652 VSIG10LQ86VR7 867 aa6.9□□□□□ -1.3
COL9A1-206ENST00000470652 TOP6BLQ8N6T0 577 aa6.9□□□□□ -1.3
COL9A1-206ENST00000470652 MFSD2AQ8NA29 543 aa6.9□□□□□ -1.3
COL9A1-206ENST00000470652 FBRSQ9HAH7 460 aa6.9□□□□□ -1.3
COL9A1-206ENST00000470652 PRDM10Q9NQV6 1147 aa6.9□□□□□ -1.3
COL9A1-206ENST00000470652 METTL5Q9NRN9 209 aaKnown RBP6.9□□□□□ -1.3
COL9A1-206ENST00000470652 BSDC1Q9NW68 430 aaPredicted RBP6.9□□□□□ -1.3
COL9A1-206ENST00000470652 PGRP06401 933 aa6.89□□□□□ -1.31
COL9A1-206ENST00000470652 ZNF76P36508 570 aa6.89□□□□□ -1.31
COL9A1-206ENST00000470652 EIF4A3P38919 411 aaKnown RBP6.89□□□□□ -1.31
COL9A1-206ENST00000470652 MPP2Q14168 576 aa6.89□□□□□ -1.31
COL9A1-206ENST00000470652 SLBPQ14493 270 aaKnown RBP eCLIP6.89□□□□□ -1.31
COL9A1-206ENST00000470652 FBXL19Q6PCT2 694 aa6.89□□□□□ -1.31
COL9A1-206ENST00000470652 NFXL1Q6ZNB6 911 aa6.89□□□□□ -1.31
COL9A1-206ENST00000470652 POU5F2Q8N7G0 328 aa6.89□□□□□ -1.31
COL9A1-206ENST00000470652 MRRFQ96E11 262 aaKnown RBP6.89□□□□□ -1.31
COL9A1-206ENST00000470652 FOXQ1Q9C009 403 aa6.89□□□□□ -1.31
COL9A1-206ENST00000470652 KCNQ5Q9NR82 932 aa6.89□□□□□ -1.31
COL9A1-206ENST00000470652 ADAM30Q9UKF2 790 aa6.89□□□□□ -1.31
COL9A1-206ENST00000470652 SUPT16HQ9Y5B9 1047 aaKnown RBP6.89□□□□□ -1.31
COL9A1-206ENST00000470652 ROBO2Q9HCK4 1378 aa6.89□□□□□ -1.31
COL9A1-206ENST00000470652 JUNBP17275 347 aaPredicted RBP6.88□□□□□ -1.31
COL9A1-206ENST00000470652 GARTP22102 1010 aa6.88□□□□□ -1.31
COL9A1-206ENST00000470652 NKG7Q16617 165 aa6.88□□□□□ -1.31
COL9A1-206ENST00000470652 FAM196AQ6ZSG2 479 aa6.88□□□□□ -1.31
COL9A1-206ENST00000470652 MRPL41Q8IXM3 137 aaKnown RBP6.88□□□□□ -1.31
COL9A1-206ENST00000470652 MKNK2Q9HBH9 465 aa6.88□□□□□ -1.31
COL9A1-206ENST00000470652 ZC3H7BQ9UGR2 993 aaKnown RBP6.88□□□□□ -1.31
COL9A1-206ENST00000470652 GTF2IRD1Q9UHL9 959 aa6.88□□□□□ -1.31
COL9A1-206ENST00000470652 GREM1O60565 184 aa6.87□□□□□ -1.31
COL9A1-206ENST00000470652 CST3P01034 146 aaPredicted RBP6.87□□□□□ -1.31
COL9A1-206ENST00000470652 FANCCQ00597 558 aa6.87□□□□□ -1.31
COL9A1-206ENST00000470652 SLC6A19Q695T7 634 aa6.87□□□□□ -1.31
COL9A1-206ENST00000470652 MCATQ8IVS2 390 aaKnown RBP6.87□□□□□ -1.31
COL9A1-206ENST00000470652 FLCNQ8NFG4 579 aa6.87□□□□□ -1.31
COL9A1-206ENST00000470652 ZNF296Q8WUU4 475 aaPredicted RBP6.87□□□□□ -1.31
COL9A1-206ENST00000470652 RNF34Q969K3 372 aa6.87□□□□□ -1.31
COL9A1-206ENST00000470652 PRR36Q9H6K5 1346 aa6.86□□□□□ -1.31
COL9A1-206ENST00000470652 SCAMP3O14828 347 aaKnown RBP6.86□□□□□ -1.31
COL9A1-206ENST00000470652 RECKO95980 971 aa6.86□□□□□ -1.31
COL9A1-206ENST00000470652 ITGB5P18084 799 aa6.86□□□□□ -1.31
COL9A1-206ENST00000470652 PLCG1P19174 1290 aa6.86□□□□□ -1.31
COL9A1-206ENST00000470652 CWF19L2Q2TBE0 894 aaKnown RBP6.86□□□□□ -1.31
COL9A1-206ENST00000470652 ARHGAP27Q6ZUM4 889 aa6.86□□□□□ -1.31
COL9A1-206ENST00000470652 REC114Q7Z4M0 266 aa6.86□□□□□ -1.31
COL9A1-206ENST00000470652 AGBL5Q8NDL9 886 aa6.86□□□□□ -1.31
COL9A1-206ENST00000470652 NETO1Q8TDF5 533 aa6.86□□□□□ -1.31
COL9A1-206ENST00000470652 TJP2Q9UDY2 1190 aa6.86□□□□□ -1.31
COL9A1-206ENST00000470652 IGF2BP3O00425 579 aaKnown RBP eCLIP6.85□□□□□ -1.31
COL9A1-206ENST00000470652 SLITRK5O94991 958 aa6.85□□□□□ -1.31
COL9A1-206ENST00000470652 EOMESO95936 686 aa6.85□□□□□ -1.31
COL9A1-206ENST00000470652 TMEM201Q5SNT2 666 aa6.85□□□□□ -1.31
COL9A1-206ENST00000470652 PRAMEF13Q5VWM6 474 aa6.85□□□□□ -1.31
COL9A1-206ENST00000470652 ZNF746Q6NUN9 644 aaPredicted RBP6.85□□□□□ -1.31
COL9A1-206ENST00000470652 FAM214BQ7L5A3 538 aa6.85□□□□□ -1.31
COL9A1-206ENST00000470652 ACSF2Q96CM8 615 aaPredicted RBP6.85□□□□□ -1.31
COL9A1-206ENST00000470652 TMEM87BQ96K49 555 aa6.85□□□□□ -1.31
COL9A1-206ENST00000470652 HEXIM2Q96MH2 286 aaKnown RBP6.85□□□□□ -1.31
COL9A1-206ENST00000470652 LRRC3Q9BY71 257 aa6.85□□□□□ -1.31
COL9A1-206ENST00000470652 ADAMTS1Q9UHI8 967 aa6.85□□□□□ -1.31
COL9A1-206ENST00000470652 CORINQ9Y5Q5 1042 aa6.85□□□□□ -1.31
COL9A1-206ENST00000470652 MYO15BQ96JP2 1530 aa6.85□□□□□ -1.31
COL9A1-206ENST00000470652 YARSP54577 528 aaKnown RBP6.84□□□□□ -1.31
COL9A1-206ENST00000470652 OXCT1P55809 520 aa6.84□□□□□ -1.31
COL9A1-206ENST00000470652 LETMD1Q6P1Q0 360 aa6.84□□□□□ -1.31
COL9A1-206ENST00000470652 USP48Q86UV5 1035 aa6.84□□□□□ -1.31
COL9A1-206ENST00000470652 FAM181AQ8N9Y4 354 aa6.84□□□□□ -1.31
COL9A1-206ENST00000470652 FBXO27Q8NI29 283 aa6.84□□□□□ -1.31
COL9A1-206ENST00000470652 MIPEPQ99797 713 aa6.84□□□□□ -1.31
COL9A1-206ENST00000470652 PAK6Q9NQU5 681 aaPredicted RBP6.84□□□□□ -1.31
COL9A1-206ENST00000470652 PRDM5Q9NQX1 630 aaPredicted RBP6.84□□□□□ -1.31
COL9A1-206ENST00000470652 MAPK8IP1Q9UQF2 711 aa6.84□□□□□ -1.31
COL9A1-206ENST00000470652 TLR3O15455 904 aaKnown RBP6.83□□□□□ -1.32
COL9A1-206ENST00000470652 GRIN3BO60391 1043 aa6.83□□□□□ -1.32
COL9A1-206ENST00000470652 CEACAM5P06731 702 aa6.83□□□□□ -1.32
COL9A1-206ENST00000470652 CYP7A1P22680 504 aa6.83□□□□□ -1.32
COL9A1-206ENST00000470652 IFI16Q16666 785 aaKnown RBP6.83□□□□□ -1.32
COL9A1-206ENST00000470652 STK11IPQ8N1F8 1099 aa6.83□□□□□ -1.32
COL9A1-206ENST00000470652 MISP3Q96FF7 219 aa6.83□□□□□ -1.32
COL9A1-206ENST00000470652 SPON2Q9BUD6 331 aa6.83□□□□□ -1.32
COL9A1-206ENST00000470652 NT5C1AQ9BXI3 368 aa6.83□□□□□ -1.32
COL9A1-206ENST00000470652 KIAA1522Q9P206 1035 aaPredicted RBP6.83□□□□□ -1.32
COL9A1-206ENST00000470652 TPX2Q9ULW0 747 aaKnown RBP6.83□□□□□ -1.32
COL9A1-206ENST00000470652 POLR3KQ9Y2Y1 108 aaPredicted RBP6.83□□□□□ -1.32
COL9A1-206ENST00000470652 UNCXA6NJT0 531 aa6.82□□□□□ -1.32
COL9A1-206ENST00000470652 HTR3BO95264 441 aa6.82□□□□□ -1.32
COL9A1-206ENST00000470652 APOBRQ0VD83 1088 aa6.82□□□□□ -1.32
COL9A1-206ENST00000470652 MLECQ14165 292 aa6.82□□□□□ -1.32
COL9A1-206ENST00000470652 KIAA0825Q8IV33 1275 aa6.82□□□□□ -1.32
COL9A1-206ENST00000470652 PLD6Q8N2A8 252 aaKnown RBP6.82□□□□□ -1.32
COL9A1-206ENST00000470652 FAM13CQ8NE31 585 aa6.82□□□□□ -1.32
COL9A1-206ENST00000470652 RIN3Q8TB24 985 aa6.82□□□□□ -1.32
COL9A1-206ENST00000470652 XAGE3Q8WTP9 111 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms