RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 SLBPQ14493 270 aaKnown RBP eCLIP3.06□□□□□ -1.92
NUCKS1-202ENST00000464938 UVSSAQ2YD98 709 aa3.06□□□□□ -1.92
NUCKS1-202ENST00000464938 LRRFIP1Q32MZ4 808 aaKnown RBP3.06□□□□□ -1.92
NUCKS1-202ENST00000464938 AKAP4Q5JQC9 854 aa3.06□□□□□ -1.92
NUCKS1-202ENST00000464938 PPM1JQ5JR12 505 aa3.06□□□□□ -1.92
NUCKS1-202ENST00000464938 CDCP2Q5VXM1 449 aa3.06□□□□□ -1.92
NUCKS1-202ENST00000464938 INTS3Q68E01 1043 aaKnown RBP3.06□□□□□ -1.92
NUCKS1-202ENST00000464938 INTS5Q6P9B9 1019 aaKnown RBP3.06□□□□□ -1.92
NUCKS1-202ENST00000464938 NFXL1Q6ZNB6 911 aa3.06□□□□□ -1.92
NUCKS1-202ENST00000464938 MCATQ8IVS2 390 aaKnown RBP3.06□□□□□ -1.92
NUCKS1-202ENST00000464938 MRPL41Q8IXM3 137 aaKnown RBP3.06□□□□□ -1.92
NUCKS1-202ENST00000464938 TAB3Q8N5C8 712 aaPredicted RBP3.06□□□□□ -1.92
NUCKS1-202ENST00000464938 C12orf50Q8NA57 414 aaPredicted RBP3.06□□□□□ -1.92
NUCKS1-202ENST00000464938 ZNF507Q8TCN5 953 aa3.06□□□□□ -1.92
NUCKS1-202ENST00000464938 UBXN4Q92575 508 aa3.06□□□□□ -1.92
NUCKS1-202ENST00000464938 ACSBG1Q96GR2 724 aa3.06□□□□□ -1.92
NUCKS1-202ENST00000464938 SRRTQ9BXP5 876 aaKnown RBP3.06□□□□□ -1.92
NUCKS1-202ENST00000464938 CEP41Q9BYV8 373 aa3.06□□□□□ -1.92
NUCKS1-202ENST00000464938 TANGO6Q9C0B7 1094 aa3.06□□□□□ -1.92
NUCKS1-202ENST00000464938 ATXN3LQ9H3M9 355 aa3.06□□□□□ -1.92
NUCKS1-202ENST00000464938 RAD18Q9NS91 495 aa3.06□□□□□ -1.92
NUCKS1-202ENST00000464938 FAM105AQ9NUU6 356 aa3.06□□□□□ -1.92
NUCKS1-202ENST00000464938 PPT2Q9UMR5 302 aa3.06□□□□□ -1.92
NUCKS1-202ENST00000464938 PCDHB14Q9Y5E9 798 aa3.06□□□□□ -1.92
NUCKS1-202ENST00000464938 CORINQ9Y5Q5 1042 aa3.06□□□□□ -1.92
NUCKS1-202ENST00000464938 ACTL7BQ9Y614 415 aa3.06□□□□□ -1.92
NUCKS1-202ENST00000464938 SLC22A31A6NKX4 558 aa3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 KLF4O43474 513 aa3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 ATP2B1P20020 1258 aa3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 GRK4P32298 578 aa3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 ETFBP38117 255 aa3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 ASPAP45381 313 aa3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 CASP7P55210 303 aa3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 PDE4BQ07343 736 aa3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 NFIAQ12857 509 aa3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 TTLL4Q14679 1199 aa3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 DIEXFQ68CQ4 756 aaKnown RBP3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 SLC6A19Q695T7 634 aa3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 CDPF1Q6NVV7 123 aa3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 SPOCD1Q6ZMY3 1216 aa3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 UBE3DQ7Z6J8 389 aa3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 HID1Q8IV36 788 aa3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 SLFN12Q8IYM2 578 aa3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 FAM169BQ8N8A8 192 aa3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 C19orf47Q8N9M1 422 aaKnown RBP3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 OR6P1Q8NGX9 317 aa3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 ISL2Q96A47 359 aa3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 ELMO3Q96BJ8 720 aa3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 ACSF2Q96CM8 615 aaPredicted RBP3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 ATG4CQ96DT6 458 aa3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 MYRFLQ96LU7 910 aa3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 ANTXR1Q9H6X2 564 aa3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 CNNM2Q9H8M5 875 aa3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 FBRSQ9HAH7 460 aa3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 REV1Q9UBZ9 1251 aa3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 TJP2Q9UDY2 1190 aa3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 CSADQ9Y600 493 aa3.05□□□□□ -1.92
NUCKS1-202ENST00000464938 CHURC1-FNTBB4DL54 471 aa3.04□□□□□ -1.92
NUCKS1-202ENST00000464938 TNFRSF10CO14798 259 aa3.04□□□□□ -1.92
NUCKS1-202ENST00000464938 GRIN3BO60391 1043 aa3.04□□□□□ -1.92
NUCKS1-202ENST00000464938 WNT11O96014 354 aa3.04□□□□□ -1.92
NUCKS1-202ENST00000464938 CST3P01034 146 aaPredicted RBP3.04□□□□□ -1.92
NUCKS1-202ENST00000464938 ITGB5P18084 799 aa3.04□□□□□ -1.92
NUCKS1-202ENST00000464938 MCM4P33991 863 aa3.04□□□□□ -1.92
NUCKS1-202ENST00000464938 EIF6P56537 245 aaKnown RBP3.04□□□□□ -1.92
NUCKS1-202ENST00000464938 NKG7Q16617 165 aa3.04□□□□□ -1.92
NUCKS1-202ENST00000464938 NBPF6Q5VWK0 638 aa3.04□□□□□ -1.92
NUCKS1-202ENST00000464938 KRTAP5-3Q6L8H2 238 aa3.04□□□□□ -1.92
NUCKS1-202ENST00000464938 FDX2Q6P4F2 183 aa3.04□□□□□ -1.92
NUCKS1-202ENST00000464938 GK5Q6ZS86 529 aa3.04□□□□□ -1.92
NUCKS1-202ENST00000464938 FAM214BQ7L5A3 538 aa3.04□□□□□ -1.92
NUCKS1-202ENST00000464938 DYMQ7RTS9 669 aa3.04□□□□□ -1.92
NUCKS1-202ENST00000464938 LSRQ86X29 649 aaPredicted RBP3.04□□□□□ -1.92
NUCKS1-202ENST00000464938 FAM20CQ8IXL6 584 aa3.04□□□□□ -1.92
NUCKS1-202ENST00000464938 SMYD4Q8IYR2 804 aaPredicted RBP3.04□□□□□ -1.92
NUCKS1-202ENST00000464938 ABI1Q8IZP0 508 aa3.04□□□□□ -1.92
NUCKS1-202ENST00000464938 KCT2Q8NC54 265 aa3.04□□□□□ -1.92
NUCKS1-202ENST00000464938 TMEM40Q8WWA1 233 aa3.04□□□□□ -1.92
NUCKS1-202ENST00000464938 DHX38Q92620 1227 aaKnown RBP3.04□□□□□ -1.92
NUCKS1-202ENST00000464938 TMEM87BQ96K49 555 aa3.04□□□□□ -1.92
NUCKS1-202ENST00000464938 NBPF4Q96M43 638 aa3.04□□□□□ -1.92
NUCKS1-202ENST00000464938 ZNF408Q9H9D4 720 aa3.04□□□□□ -1.92
NUCKS1-202ENST00000464938 GMIPQ9P107 970 aa3.04□□□□□ -1.92
NUCKS1-202ENST00000464938 PRKAG3Q9UGI9 489 aa3.04□□□□□ -1.92
NUCKS1-202ENST00000464938 PCOLCE2Q9UKZ9 415 aa3.04□□□□□ -1.92
NUCKS1-202ENST00000464938 PRAMEF27A3QJZ7 478 aa3.03□□□□□ -1.92
NUCKS1-202ENST00000464938 UPK3BL1B0FP48 263 aa3.03□□□□□ -1.92
NUCKS1-202ENST00000464938 UPK3BL2E5RIL1 263 aa3.03□□□□□ -1.92
NUCKS1-202ENST00000464938 DYNC1LI2O43237 492 aaPredicted RBP3.03□□□□□ -1.92
NUCKS1-202ENST00000464938 PGRP06401 933 aa3.03□□□□□ -1.92
NUCKS1-202ENST00000464938 ACRP10323 421 aa3.03□□□□□ -1.92
NUCKS1-202ENST00000464938 NME1P15531 152 aaKnown RBP3.03□□□□□ -1.92
NUCKS1-202ENST00000464938 GLB1P16278 677 aa3.03□□□□□ -1.92
NUCKS1-202ENST00000464938 PLCG1P19174 1290 aa3.03□□□□□ -1.92
NUCKS1-202ENST00000464938 CCNFP41002 786 aa3.03□□□□□ -1.92
NUCKS1-202ENST00000464938 SERINC3Q13530 473 aa3.03□□□□□ -1.92
NUCKS1-202ENST00000464938 SGO2Q562F6 1265 aa3.03□□□□□ -1.92
NUCKS1-202ENST00000464938 SOGA3Q5TF21 947 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms