RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 USP6NLQ92738 828 aa19.33■□□□□ 0.68
SND1-203ENST00000463020 YTHDC1Q96MU7 727 aaKnown RBP19.33■□□□□ 0.68
SND1-203ENST00000463020 HERC5Q9UII4 1024 aaKnown RBP19.33■□□□□ 0.68
SND1-203ENST00000463020 VCANP13611 3396 aa19.33■□□□□ 0.68
SND1-203ENST00000463020 MYO5AQ9Y4I1 1855 aaKnown RBP19.33■□□□□ 0.68
SND1-203ENST00000463020 LDHCP07864 332 aa19.32■□□□□ 0.68
SND1-203ENST00000463020 CACNB2Q08289 660 aaPredicted RBP19.32■□□□□ 0.68
SND1-203ENST00000463020 PABPC4Q13310 644 aaKnown RBP eCLIP19.32■□□□□ 0.68
SND1-203ENST00000463020 GORABQ5T7V8 394 aa19.32■□□□□ 0.68
SND1-203ENST00000463020 DEFB123Q8N688 67 aa19.32■□□□□ 0.68
SND1-203ENST00000463020 TGFBRAP1Q8WUH2 860 aa19.32■□□□□ 0.68
SND1-203ENST00000463020 LRP2BPQ9P2M1 347 aa19.32■□□□□ 0.68
SND1-203ENST00000463020 SAP30BPQ9UHR5 308 aaKnown RBP19.32■□□□□ 0.68
SND1-203ENST00000463020 PALD1Q9ULE6 856 aa19.32■□□□□ 0.68
SND1-203ENST00000463020 FOCADQ5VW36 1801 aa19.31■□□□□ 0.68
SND1-203ENST00000463020 GNAI3P08754 354 aa19.31■□□□□ 0.68
SND1-203ENST00000463020 COL6A1P12109 1028 aa19.31■□□□□ 0.68
SND1-203ENST00000463020 CAPN2P17655 700 aa19.31■□□□□ 0.68
SND1-203ENST00000463020 HOXA7P31268 230 aaPredicted RBP19.31■□□□□ 0.68
SND1-203ENST00000463020 DYNLL1P63167 89 aaKnown RBP19.31■□□□□ 0.68
SND1-203ENST00000463020 IRX3P78415 501 aaPredicted RBP19.31■□□□□ 0.68
SND1-203ENST00000463020 LHX8Q68G74 356 aa19.31■□□□□ 0.68
SND1-203ENST00000463020 METTL16Q86W50 562 aaKnown RBP19.31■□□□□ 0.68
SND1-203ENST00000463020 DBNDD2Q9BQY9 259 aa19.31■□□□□ 0.68
SND1-203ENST00000463020 TBC1D2Q9BYX2 928 aa19.31■□□□□ 0.68
SND1-203ENST00000463020 EMILIN3Q9NT22 766 aa19.31■□□□□ 0.68
SND1-203ENST00000463020 PI4KBQ9UBF8 816 aa19.31■□□□□ 0.68
SND1-203ENST00000463020 CNMDO75829 334 aa19.3■□□□□ 0.68
SND1-203ENST00000463020 MAP4K4O95819 1239 aaPredicted RBP19.3■□□□□ 0.68
SND1-203ENST00000463020 CYP2E1P05181 493 aaPredicted RBP19.3■□□□□ 0.68
SND1-203ENST00000463020 CT47B1P0C2W7 299 aaPredicted RBP19.3■□□□□ 0.68
SND1-203ENST00000463020 TRIM27P14373 513 aa19.3■□□□□ 0.68
SND1-203ENST00000463020 LRRC26Q2I0M4 334 aa19.3■□□□□ 0.68
SND1-203ENST00000463020 GPRC5AQ8NFJ5 357 aa19.3■□□□□ 0.68
SND1-203ENST00000463020 AS3MTQ9HBK9 375 aa19.3■□□□□ 0.68
SND1-203ENST00000463020 PIH1D3Q9NQM4 214 aaKnown RBP19.3■□□□□ 0.68
SND1-203ENST00000463020 ZBTB21Q9ULJ3 1066 aa19.3■□□□□ 0.68
SND1-203ENST00000463020 MORN1Q5T089 497 aa19.29■□□□□ 0.68
SND1-203ENST00000463020 NAA16Q6N069 864 aaPredicted RBP19.29■□□□□ 0.68
SND1-203ENST00000463020 PAGR1Q9BTK6 254 aa19.29■□□□□ 0.68
SND1-203ENST00000463020 TLR7Q9NYK1 1049 aaKnown RBP19.29■□□□□ 0.68
SND1-203ENST00000463020 FLRT1Q9NZU1 646 aa19.29■□□□□ 0.68
SND1-203ENST00000463020 HDAC5Q9UQL6 1122 aa19.29■□□□□ 0.68
SND1-203ENST00000463020 NDUFB9Q9Y6M9 179 aa19.29■□□□□ 0.68
SND1-203ENST00000463020 SPTBN5Q9NRC6 3674 aaKnown RBP19.29■□□□□ 0.68
SND1-203ENST00000463020 BCAR3O75815 825 aa19.28■□□□□ 0.68
SND1-203ENST00000463020 ASNSP08243 561 aa19.28■□□□□ 0.68
SND1-203ENST00000463020 PPP4CP60510 307 aa19.28■□□□□ 0.68
SND1-203ENST00000463020 ERVK-9P63128 1117 aa19.28■□□□□ 0.68
SND1-203ENST00000463020 ERVK-24P63145 666 aa19.28■□□□□ 0.68
SND1-203ENST00000463020 LRIT3Q3SXY7 679 aa19.28■□□□□ 0.68
SND1-203ENST00000463020 GPR142Q7Z601 462 aa19.28■□□□□ 0.68
SND1-203ENST00000463020 TDHQ8IZJ6 230 aa19.28■□□□□ 0.68
SND1-203ENST00000463020 ARHGAP45Q92619 1136 aa19.28■□□□□ 0.68
SND1-203ENST00000463020 NUDT12Q9BQG2 462 aa19.28■□□□□ 0.68
SND1-203ENST00000463020 TMOD4Q9NZQ9 345 aa19.28■□□□□ 0.68
SND1-203ENST00000463020 USP17L10C9JJH3 530 aa19.27■□□□□ 0.68
SND1-203ENST00000463020 XRCC5P13010 732 aaKnown RBP19.27■□□□□ 0.68
SND1-203ENST00000463020 ZKSCAN1P17029 563 aaPredicted RBP19.27■□□□□ 0.68
SND1-203ENST00000463020 ZAP70P43403 619 aa19.27■□□□□ 0.68
SND1-203ENST00000463020 TNNI3KQ59H18 835 aa19.27■□□□□ 0.68
SND1-203ENST00000463020 CLUAP1Q96AJ1 413 aa19.27■□□□□ 0.68
SND1-203ENST00000463020 DHX36Q9H2U1 1008 aaKnown RBP19.27■□□□□ 0.68
SND1-203ENST00000463020 MTMR10Q9NXD2 777 aa19.27■□□□□ 0.68
SND1-203ENST00000463020 FPGT-TNNI3KV9GXZ4 949 aa19.27■□□□□ 0.68
SND1-203ENST00000463020 CDH23Q9H251 3354 aa19.27■□□□□ 0.67
SND1-203ENST00000463020 FRMPD3Q5JV73 1810 aa19.26■□□□□ 0.67
SND1-203ENST00000463020 GNAI2P04899 355 aa19.26■□□□□ 0.67
SND1-203ENST00000463020 UQCRFS1P1P0C7P4 283 aa19.26■□□□□ 0.67
SND1-203ENST00000463020 MDM2Q00987 491 aaPredicted RBP19.26■□□□□ 0.67
SND1-203ENST00000463020 G3BP1Q13283 466 aaKnown RBP eCLIP19.26■□□□□ 0.67
SND1-203ENST00000463020 ZYXQ15942 572 aaKnown RBP19.26■□□□□ 0.67
SND1-203ENST00000463020 SOCS4Q8WXH5 440 aa19.26■□□□□ 0.67
SND1-203ENST00000463020 UBE2OQ9C0C9 1292 aaKnown RBP19.26■□□□□ 0.67
SND1-203ENST00000463020 GH2P01242 217 aa19.25■□□□□ 0.67
SND1-203ENST00000463020 MAPK4P31152 587 aa19.25■□□□□ 0.67
SND1-203ENST00000463020 EVX2Q03828 476 aa19.25■□□□□ 0.67
SND1-203ENST00000463020 POLA2Q14181 598 aa19.25■□□□□ 0.67
SND1-203ENST00000463020 TTC39AQ5SRH9 613 aa19.25■□□□□ 0.67
SND1-203ENST00000463020 CRACR2BQ8N4Y2 399 aaPredicted RBP19.25■□□□□ 0.67
SND1-203ENST00000463020 PRUNE2Q8WUY3 3088 aa19.25■□□□□ 0.67
SND1-203ENST00000463020 C19orf81C9J6K1 198 aa19.24■□□□□ 0.67
SND1-203ENST00000463020 GPR153Q6NV75 609 aa19.24■□□□□ 0.67
SND1-203ENST00000463020 PLEKHH3Q7Z736 793 aa19.24■□□□□ 0.67
SND1-203ENST00000463020 FOXP4Q8IVH2 680 aaPredicted RBP19.24■□□□□ 0.67
SND1-203ENST00000463020 MIGA1Q8NAN2 632 aa19.24■□□□□ 0.67
SND1-203ENST00000463020 ACER1Q8TDN7 264 aa19.24■□□□□ 0.67
SND1-203ENST00000463020 APBA2Q99767 749 aa19.24■□□□□ 0.67
SND1-203ENST00000463020 NOL10Q9BSC4 688 aaKnown RBP19.24■□□□□ 0.67
SND1-203ENST00000463020 C1orf115Q9H7X2 142 aa19.24■□□□□ 0.67
SND1-203ENST00000463020 DBNLQ9UJU6 430 aaKnown RBP19.24■□□□□ 0.67
SND1-203ENST00000463020 BAG3O95817 575 aa19.23■□□□□ 0.67
SND1-203ENST00000463020 RGS2P41220 211 aa19.23■□□□□ 0.67
SND1-203ENST00000463020 PDE3AQ14432 1141 aa19.23■□□□□ 0.67
SND1-203ENST00000463020 TMEM57Q8N5G2 664 aa19.23■□□□□ 0.67
SND1-203ENST00000463020 TRPV1Q8NER1 839 aa19.23■□□□□ 0.67
SND1-203ENST00000463020 FRAT1Q92837 279 aaPredicted RBP19.23■□□□□ 0.67
SND1-203ENST00000463020 STXBP5LQ9Y2K9 1186 aa19.23■□□□□ 0.67
SND1-203ENST00000463020 USP17L2Q6R6M4 530 aa19.22■□□□□ 0.67
SND1-203ENST00000463020 ATF7IPQ6VMQ6 1270 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms