RNA–Protein interactions for RNA: ENST00000461259.5

CCDC146-204, Transcript of coiled-coil domain containing 146, humanhuman

TSL 1 (best)

Gene CCDC146, Length 1,554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146-204ENST00000461259 PHRF1Q9P1Y6 1649 aaKnown RBP6.29□□□□□ -1.4
CCDC146-204ENST00000461259 WDR17Q8IZU2 1322 aa6.29□□□□□ -1.4
CCDC146-204ENST00000461259 ZNF142P52746 1687 aaPredicted RBP6.29□□□□□ -1.4
CCDC146-204ENST00000461259 MED1Q15648 1581 aaPredicted RBP6.29□□□□□ -1.4
CCDC146-204ENST00000461259 SYCE3A1L190 88 aa6.29□□□□□ -1.4
CCDC146-204ENST00000461259 PRAMEF22A3QJZ6 481 aa6.29□□□□□ -1.4
CCDC146-204ENST00000461259 MEN1O00255 615 aa6.29□□□□□ -1.4
CCDC146-204ENST00000461259 CYP27B1O15528 508 aa6.29□□□□□ -1.4
CCDC146-204ENST00000461259 TPD52L2O43399 206 aaKnown RBP6.29□□□□□ -1.4
CCDC146-204ENST00000461259 CIAO1O76071 339 aa6.29□□□□□ -1.4
CCDC146-204ENST00000461259 PTMAP06454 111 aaKnown RBP6.29□□□□□ -1.4
CCDC146-204ENST00000461259 ZFYP08048 801 aaPredicted RBP6.29□□□□□ -1.4
CCDC146-204ENST00000461259 RPS6KB1P23443 525 aa6.29□□□□□ -1.4
CCDC146-204ENST00000461259 ERCC5P28715 1186 aaPredicted RBP6.29□□□□□ -1.4
CCDC146-204ENST00000461259 GPC1P35052 558 aa6.29□□□□□ -1.4
CCDC146-204ENST00000461259 PTH1RQ03431 593 aa6.29□□□□□ -1.4
CCDC146-204ENST00000461259 TFCP2Q12800 502 aa6.29□□□□□ -1.4
CCDC146-204ENST00000461259 PHLDB3Q6NSJ2 640 aa6.29□□□□□ -1.4
CCDC146-204ENST00000461259 LMBR1LQ6UX01 489 aa6.29□□□□□ -1.4
CCDC146-204ENST00000461259 CCDC83Q8IWF9 413 aa6.29□□□□□ -1.4
CCDC146-204ENST00000461259 Q8N3U1 123 aa6.29□□□□□ -1.4
CCDC146-204ENST00000461259 PNMA1Q8ND90 353 aa6.29□□□□□ -1.4
CCDC146-204ENST00000461259 GPT2Q8TD30 523 aa6.29□□□□□ -1.4
CCDC146-204ENST00000461259 DDX54Q8TDD1 881 aaKnown RBP6.29□□□□□ -1.4
CCDC146-204ENST00000461259 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.29□□□□□ -1.4
CCDC146-204ENST00000461259 KAZALD1Q96I82 304 aa6.29□□□□□ -1.4
CCDC146-204ENST00000461259 HAUS7Q99871 368 aa6.29□□□□□ -1.4
CCDC146-204ENST00000461259 LLPHQ9BRT6 129 aaKnown RBP6.29□□□□□ -1.4
CCDC146-204ENST00000461259 ZSCAN16Q9H4T2 348 aaPredicted RBP6.29□□□□□ -1.4
CCDC146-204ENST00000461259 MAFBQ9Y5Q3 323 aaPredicted RBP6.29□□□□□ -1.4
CCDC146-204ENST00000461259 LTN1O94822 1766 aa6.29□□□□□ -1.4
CCDC146-204ENST00000461259 GOLGA6L6A8MZA4 724 aa6.28□□□□□ -1.4
CCDC146-204ENST00000461259 H3BQV1 296 aa6.28□□□□□ -1.4
CCDC146-204ENST00000461259 EYA2O00167 538 aa6.28□□□□□ -1.4
CCDC146-204ENST00000461259 DHX16O60231 1041 aaKnown RBP6.28□□□□□ -1.4
CCDC146-204ENST00000461259 PTCD1O75127 700 aaKnown RBP6.28□□□□□ -1.4
CCDC146-204ENST00000461259 TAF5LO75529 589 aa6.28□□□□□ -1.4
CCDC146-204ENST00000461259 CAVIN2O95810 425 aa6.28□□□□□ -1.4
CCDC146-204ENST00000461259 USP17L8P0C7I0 530 aa6.28□□□□□ -1.4
CCDC146-204ENST00000461259 KIAA2012Q0VF49 1180 aa6.28□□□□□ -1.4
CCDC146-204ENST00000461259 TRIM28Q13263 835 aaKnown RBP6.28□□□□□ -1.4
CCDC146-204ENST00000461259 USPL1Q5W0Q7 1092 aa6.28□□□□□ -1.4
CCDC146-204ENST00000461259 ATL3Q6DD88 541 aa6.28□□□□□ -1.4
CCDC146-204ENST00000461259 KBTBD3Q8NAB2 608 aa6.28□□□□□ -1.4
CCDC146-204ENST00000461259 NAP1L5Q96NT1 182 aaPredicted RBP6.28□□□□□ -1.4
CCDC146-204ENST00000461259 TRERF1Q96PN7 1200 aa6.28□□□□□ -1.4
CCDC146-204ENST00000461259 UCN2Q96RP3 112 aa6.28□□□□□ -1.4
CCDC146-204ENST00000461259 GAS2L1Q99501 681 aaPredicted RBP6.28□□□□□ -1.4
CCDC146-204ENST00000461259 DNAJC2Q99543 621 aaKnown RBP6.28□□□□□ -1.4
CCDC146-204ENST00000461259 LRRC4BQ9NT99 713 aa6.28□□□□□ -1.4
CCDC146-204ENST00000461259 TMOD3Q9NYL9 352 aa6.28□□□□□ -1.4
CCDC146-204ENST00000461259 SUGT1Q9Y2Z0 365 aa6.28□□□□□ -1.4
CCDC146-204ENST00000461259 TNS3Q68CZ2 1445 aa6.28□□□□□ -1.4
CCDC146-204ENST00000461259 LMO7Q8WWI1 1683 aa6.28□□□□□ -1.4
CCDC146-204ENST00000461259 ABCC6O95255 1503 aa6.27□□□□□ -1.41
CCDC146-204ENST00000461259 A0A1W2PRU2 124 aa6.27□□□□□ -1.41
CCDC146-204ENST00000461259 VPS37CA5D8V6 355 aaPredicted RBP6.27□□□□□ -1.41
CCDC146-204ENST00000461259 IFIT1P09914 478 aaKnown RBP6.27□□□□□ -1.41
CCDC146-204ENST00000461259 CCDC192P0DO97 292 aa6.27□□□□□ -1.41
CCDC146-204ENST00000461259 MX2P20592 715 aa6.27□□□□□ -1.41
CCDC146-204ENST00000461259 RFX5P48382 616 aaPredicted RBP6.27□□□□□ -1.41
CCDC146-204ENST00000461259 HMGN5P82970 282 aaKnown RBP6.27□□□□□ -1.41
CCDC146-204ENST00000461259 POU4F2Q12837 409 aa6.27□□□□□ -1.41
CCDC146-204ENST00000461259 TCIRG1Q13488 830 aa6.27□□□□□ -1.41
CCDC146-204ENST00000461259 FOXD4L6Q3SYB3 417 aaPredicted RBP6.27□□□□□ -1.41
CCDC146-204ENST00000461259 CCDC181Q5TID7 509 aa6.27□□□□□ -1.41
CCDC146-204ENST00000461259 FOXD4L3Q6VB84 417 aaPredicted RBP6.27□□□□□ -1.41
CCDC146-204ENST00000461259 DHX32Q7L7V1 743 aaKnown RBP6.27□□□□□ -1.41
CCDC146-204ENST00000461259 FAM227BQ96M60 508 aa6.27□□□□□ -1.41
CCDC146-204ENST00000461259 DSCC1Q9BVC3 393 aa6.27□□□□□ -1.41
CCDC146-204ENST00000461259 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.27□□□□□ -1.41
CCDC146-204ENST00000461259 RBSNQ9H1K0 784 aa6.27□□□□□ -1.41
CCDC146-204ENST00000461259 PAG1Q9NWQ8 432 aa6.27□□□□□ -1.41
CCDC146-204ENST00000461259 TMEM63CQ9P1W3 806 aa6.27□□□□□ -1.41
CCDC146-204ENST00000461259 ADAMTSL3P82987 1691 aa6.27□□□□□ -1.41
CCDC146-204ENST00000461259 TLDC2A0PJX2 215 aa6.27□□□□□ -1.41
CCDC146-204ENST00000461259 RNF113AO15541 343 aaKnown RBP6.27□□□□□ -1.41
CCDC146-204ENST00000461259 OIP5O43482 229 aa6.27□□□□□ -1.41
CCDC146-204ENST00000461259 SNRPNP63162 240 aaKnown RBP6.27□□□□□ -1.41
CCDC146-204ENST00000461259 VAC14Q08AM6 782 aa6.27□□□□□ -1.41
CCDC146-204ENST00000461259 IFIT5Q13325 482 aaKnown RBP6.27□□□□□ -1.41
CCDC146-204ENST00000461259 TTF1Q15361 905 aaPredicted RBP6.27□□□□□ -1.41
CCDC146-204ENST00000461259 ME3Q16798 604 aa6.27□□□□□ -1.41
CCDC146-204ENST00000461259 TTC39AQ5SRH9 613 aa6.27□□□□□ -1.41
CCDC146-204ENST00000461259 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.27□□□□□ -1.41
CCDC146-204ENST00000461259 ZNF396Q96N95 335 aaPredicted RBP6.27□□□□□ -1.41
CCDC146-204ENST00000461259 RRAGDQ9NQL2 400 aaPredicted RBP6.27□□□□□ -1.41
CCDC146-204ENST00000461259 BIN2Q9UBW5 565 aaPredicted RBP6.27□□□□□ -1.41
CCDC146-204ENST00000461259 DBNLQ9UJU6 430 aaKnown RBP6.27□□□□□ -1.41
CCDC146-204ENST00000461259 TPCN1Q9ULQ1 816 aa6.27□□□□□ -1.41
CCDC146-204ENST00000461259 NOL7Q9UMY1 257 aaKnown RBP6.27□□□□□ -1.41
CCDC146-204ENST00000461259 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.27□□□□□ -1.41
CCDC146-204ENST00000461259 MTMR6Q9Y217 621 aa6.27□□□□□ -1.41
CCDC146-204ENST00000461259 ELP1O95163 1332 aa6.26□□□□□ -1.41
CCDC146-204ENST00000461259 FAM208AQ9UK61 1670 aaKnown RBP6.26□□□□□ -1.41
CCDC146-204ENST00000461259 KRBA1A5PL33 1030 aa6.26□□□□□ -1.41
CCDC146-204ENST00000461259 EXOC5O00471 708 aa6.26□□□□□ -1.41
CCDC146-204ENST00000461259 FIBPO43427 364 aa6.26□□□□□ -1.41
CCDC146-204ENST00000461259 A1BGP04217 495 aa6.26□□□□□ -1.41
CCDC146-204ENST00000461259 TPM2P07951 284 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms