RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 C7orf43Q8WVR3 580 aa12.66□□□□□ -0.38
IFT88-204ENST00000461115 SPATA32Q96LK8 384 aa12.66□□□□□ -0.38
IFT88-204ENST00000461115 ZNF396Q96N95 335 aaPredicted RBP12.66□□□□□ -0.38
IFT88-204ENST00000461115 GPR101Q96P66 508 aaPredicted RBP12.66□□□□□ -0.38
IFT88-204ENST00000461115 UBAC1Q9BSL1 405 aa12.66□□□□□ -0.38
IFT88-204ENST00000461115 MRIQ9BWK5 157 aa12.66□□□□□ -0.38
IFT88-204ENST00000461115 ANO8Q9HCE9 1232 aaPredicted RBP12.66□□□□□ -0.38
IFT88-204ENST00000461115 TCP11L1Q9NUJ3 509 aa12.66□□□□□ -0.38
IFT88-204ENST00000461115 RTEL1Q9NZ71 1219 aa12.66□□□□□ -0.38
IFT88-204ENST00000461115 TNKSO95271 1327 aa12.66□□□□□ -0.38
IFT88-204ENST00000461115 SMIM22K7EJ46 135 aa12.65□□□□□ -0.38
IFT88-204ENST00000461115 DDAH1O94760 285 aa12.65□□□□□ -0.38
IFT88-204ENST00000461115 ECM2O94769 699 aaPredicted RBP12.65□□□□□ -0.38
IFT88-204ENST00000461115 CALM1P0DP23 149 aa12.65□□□□□ -0.38
IFT88-204ENST00000461115 CALM2P0DP24 149 aa12.65□□□□□ -0.38
IFT88-204ENST00000461115 CALM3P0DP25 149 aa12.65□□□□□ -0.38
IFT88-204ENST00000461115 U2AF2P26368 475 aaKnown RBP eCLIP12.65□□□□□ -0.382e-6■■□□□ 13.9
IFT88-204ENST00000461115 IARSP41252 1262 aaKnown RBP12.65□□□□□ -0.38
IFT88-204ENST00000461115 RHBDL3P58872 404 aa12.65□□□□□ -0.38
IFT88-204ENST00000461115 KIF23Q02241 960 aaPredicted RBP12.65□□□□□ -0.38
IFT88-204ENST00000461115 PDE4BQ07343 736 aa12.65□□□□□ -0.38
IFT88-204ENST00000461115 FUT2Q10981 343 aa12.65□□□□□ -0.38
IFT88-204ENST00000461115 TROAPQ12815 778 aa12.65□□□□□ -0.38
IFT88-204ENST00000461115 EZH2Q15910 746 aaKnown RBP12.65□□□□□ -0.38
IFT88-204ENST00000461115 FOXD4L6Q3SYB3 417 aaPredicted RBP12.65□□□□□ -0.38
IFT88-204ENST00000461115 MFSD14BQ5SR56 506 aa12.65□□□□□ -0.38
IFT88-204ENST00000461115 FOXD4L3Q6VB84 417 aaPredicted RBP12.65□□□□□ -0.38
IFT88-204ENST00000461115 NFXL1Q6ZNB6 911 aa12.65□□□□□ -0.38
IFT88-204ENST00000461115 RBM43Q6ZSC3 357 aaKnown RBP12.65□□□□□ -0.38
IFT88-204ENST00000461115 MICU3Q86XE3 530 aa12.65□□□□□ -0.38
IFT88-204ENST00000461115 IQCA1Q86XH1 822 aa12.65□□□□□ -0.38
IFT88-204ENST00000461115 CRACR2BQ8N4Y2 399 aaPredicted RBP12.65□□□□□ -0.38
IFT88-204ENST00000461115 PDCD7Q8N8D1 485 aaKnown RBP12.65□□□□□ -0.38
IFT88-204ENST00000461115 FANCBQ8NB91 859 aa12.65□□□□□ -0.38
IFT88-204ENST00000461115 SH3RF3Q8TEJ3 882 aaPredicted RBP12.65□□□□□ -0.38
IFT88-204ENST00000461115 WASF1Q92558 559 aa12.65□□□□□ -0.38
IFT88-204ENST00000461115 PGBD1Q96JS3 809 aa12.65□□□□□ -0.38
IFT88-204ENST00000461115 MAP3K14Q99558 947 aa12.65□□□□□ -0.38
IFT88-204ENST00000461115 POLR3EQ9NVU0 708 aa12.65□□□□□ -0.38
IFT88-204ENST00000461115 SCN9AQ15858 1988 aa12.65□□□□□ -0.38
IFT88-204ENST00000461115 CYP2D7A0A087X1C5 515 aa12.64□□□□□ -0.39
IFT88-204ENST00000461115 NASPP49321 788 aaPredicted RBP12.64□□□□□ -0.39
IFT88-204ENST00000461115 DIXDC1Q155Q3 683 aa12.64□□□□□ -0.39
IFT88-204ENST00000461115 RTN1Q16799 776 aa12.64□□□□□ -0.39
IFT88-204ENST00000461115 CCDC178Q5BJE1 867 aa12.64□□□□□ -0.39
IFT88-204ENST00000461115 CC2D2BQ6DHV5 1058 aa12.64□□□□□ -0.39
IFT88-204ENST00000461115 PODNQ7Z5L7 613 aa12.64□□□□□ -0.39
IFT88-204ENST00000461115 FBXO41Q8TF61 875 aa12.64□□□□□ -0.39
IFT88-204ENST00000461115 EYA3Q99504 573 aa12.64□□□□□ -0.39
IFT88-204ENST00000461115 FUCA2Q9BTY2 467 aa12.64□□□□□ -0.39
IFT88-204ENST00000461115 RNF26Q9BY78 433 aaPredicted RBP12.64□□□□□ -0.39
IFT88-204ENST00000461115 STK32BQ9NY57 414 aa12.64□□□□□ -0.39
IFT88-204ENST00000461115 NAP1L2Q9ULW6 460 aaPredicted RBP12.64□□□□□ -0.39
IFT88-204ENST00000461115 SYCE3A1L190 88 aa12.63□□□□□ -0.39
IFT88-204ENST00000461115 C6orf229H3BNL8 230 aa12.63□□□□□ -0.39
IFT88-204ENST00000461115 YEATS4O95619 227 aa12.63□□□□□ -0.39
IFT88-204ENST00000461115 NOVP48745 357 aa12.63□□□□□ -0.39
IFT88-204ENST00000461115 GRIPAP1Q4V328 841 aa12.63□□□□□ -0.39
IFT88-204ENST00000461115 RRP12Q5JTH9 1297 aaKnown RBP12.63□□□□□ -0.39
IFT88-204ENST00000461115 MYSM1Q5VVJ2 828 aa12.63□□□□□ -0.39
IFT88-204ENST00000461115 RCSD1Q6JBY9 416 aa12.63□□□□□ -0.39
IFT88-204ENST00000461115 DPP8Q6V1X1 898 aaPredicted RBP12.63□□□□□ -0.39
IFT88-204ENST00000461115 DGKHQ86XP1 1220 aa12.63□□□□□ -0.39
IFT88-204ENST00000461115 CNKSR1Q969H4 720 aa12.63□□□□□ -0.39
IFT88-204ENST00000461115 USP28Q96RU2 1077 aa12.63□□□□□ -0.39
IFT88-204ENST00000461115 NOL10Q9BSC4 688 aaKnown RBP12.63□□□□□ -0.39
IFT88-204ENST00000461115 ALG1Q9BT22 464 aa12.63□□□□□ -0.39
IFT88-204ENST00000461115 ZC3H12CQ9C0D7 883 aaKnown RBP12.63□□□□□ -0.39
IFT88-204ENST00000461115 RBM28Q9NW13 759 aaKnown RBP12.63□□□□□ -0.39
IFT88-204ENST00000461115 TFIP11Q9UBB9 837 aaKnown RBP12.63□□□□□ -0.39
IFT88-204ENST00000461115 MORC2Q9Y6X9 1032 aaPredicted RBP12.63□□□□□ -0.39
IFT88-204ENST00000461115 C10orf71Q711Q0 1435 aa12.63□□□□□ -0.39
IFT88-204ENST00000461115 H0YIN7 160 aa12.62□□□□□ -0.39
IFT88-204ENST00000461115 DEXIO95424 95 aa12.62□□□□□ -0.39
IFT88-204ENST00000461115 BTDP43251 543 aa12.62□□□□□ -0.39
IFT88-204ENST00000461115 SSRP1Q08945 709 aaKnown RBP12.62□□□□□ -0.39
IFT88-204ENST00000461115 KRT40Q6A162 431 aa12.62□□□□□ -0.39
IFT88-204ENST00000461115 HHIPL2Q6UWX4 724 aa12.62□□□□□ -0.39
IFT88-204ENST00000461115 C2CD5Q86YS7 1000 aa12.62□□□□□ -0.39
IFT88-204ENST00000461115 DDX19AQ9NUU7 478 aaKnown RBP12.62□□□□□ -0.39
IFT88-204ENST00000461115 MCM9Q9NXL9 1143 aa12.62□□□□□ -0.39
IFT88-204ENST00000461115 JAG2Q9Y219 1238 aa12.62□□□□□ -0.39
IFT88-204ENST00000461115 MYH8P13535 1937 aa12.62□□□□□ -0.39
IFT88-204ENST00000461115 GREB1LQ9C091 1923 aaPredicted RBP12.62□□□□□ -0.39
IFT88-204ENST00000461115 A0A1W2PQ27 194 aa12.62□□□□□ -0.39
IFT88-204ENST00000461115 A0A1W2PQ64 194 aa12.62□□□□□ -0.39
IFT88-204ENST00000461115 A0A1W2PQD8 194 aa12.62□□□□□ -0.39
IFT88-204ENST00000461115 PRPF3O43395 683 aaKnown RBP12.62□□□□□ -0.39
IFT88-204ENST00000461115 USP17L8P0C7I0 530 aa12.62□□□□□ -0.39
IFT88-204ENST00000461115 CYP2D6P10635 497 aa12.62□□□□□ -0.39
IFT88-204ENST00000461115 RXRAP19793 462 aa12.62□□□□□ -0.39
IFT88-204ENST00000461115 HDLBPQ00341 1268 aaKnown RBP12.62□□□□□ -0.39
IFT88-204ENST00000461115 EN1Q05925 392 aaPredicted RBP12.62□□□□□ -0.39
IFT88-204ENST00000461115 IFIT1BQ5T764 474 aaKnown RBP12.62□□□□□ -0.39
IFT88-204ENST00000461115 C16orf86Q6ZW13 317 aa12.62□□□□□ -0.39
IFT88-204ENST00000461115 CERS5Q8N5B7 392 aa12.62□□□□□ -0.39
IFT88-204ENST00000461115 LINC00301Q8NCQ3 95 aa12.62□□□□□ -0.39
IFT88-204ENST00000461115 SLC16A10Q8TF71 515 aa12.62□□□□□ -0.39
IFT88-204ENST00000461115 PPP1R9BQ96SB3 815 aa12.62□□□□□ -0.39
IFT88-204ENST00000461115 ZKSCAN3Q9BRR0 538 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms