RNA–Protein interactions for RNA: ENST00000460215.5

SCMH1-212, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-212ENST00000460215 SNX17Q15036 470 aa10.71□□□□□ -0.69
SCMH1-212ENST00000460215 PLEKHH3Q7Z736 793 aa10.71□□□□□ -0.69
SCMH1-212ENST00000460215 WDR66Q8TBY9 1149 aa10.71□□□□□ -0.69
SCMH1-212ENST00000460215 P2RX7Q99572 595 aaKnown RBP10.71□□□□□ -0.69
SCMH1-212ENST00000460215 PORCNQ9H237 461 aa10.71□□□□□ -0.69
SCMH1-212ENST00000460215 CWC22Q9HCG8 908 aaKnown RBP10.71□□□□□ -0.69
SCMH1-212ENST00000460215 CHD9Q3L8U1 2897 aa10.71□□□□□ -0.7
SCMH1-212ENST00000460215 TCF20Q9UGU0 1960 aaKnown RBP10.7□□□□□ -0.7
SCMH1-212ENST00000460215 FAM86C2PA6NEL3 165 aa10.7□□□□□ -0.7
SCMH1-212ENST00000460215 DDTLA6NHG4 134 aaPredicted RBP10.7□□□□□ -0.7
SCMH1-212ENST00000460215 MYCNP04198 464 aaPredicted RBP10.7□□□□□ -0.7
SCMH1-212ENST00000460215 CT47B1P0C2W7 299 aaPredicted RBP10.7□□□□□ -0.7
SCMH1-212ENST00000460215 ITGB8P26012 769 aa10.7□□□□□ -0.7
SCMH1-212ENST00000460215 PRDX5P30044 214 aa10.7□□□□□ -0.7
SCMH1-212ENST00000460215 HERVK_113P62684 666 aa10.7□□□□□ -0.7
SCMH1-212ENST00000460215 TFF2Q03403 129 aa10.7□□□□□ -0.7
SCMH1-212ENST00000460215 FPGSQ05932 587 aa10.7□□□□□ -0.7
SCMH1-212ENST00000460215 AAK1Q2M2I8 961 aa10.7□□□□□ -0.7
SCMH1-212ENST00000460215 METTL24Q5JXM2 366 aa10.7□□□□□ -0.7
SCMH1-212ENST00000460215 TRMT2AQ8IZ69 625 aaKnown RBP10.7□□□□□ -0.7
SCMH1-212ENST00000460215 ARRDC4Q8NCT1 418 aa10.7□□□□□ -0.7
SCMH1-212ENST00000460215 IDI2Q9BXS1 227 aa10.7□□□□□ -0.7
SCMH1-212ENST00000460215 SMC4Q9NTJ3 1288 aa10.7□□□□□ -0.7
SCMH1-212ENST00000460215 RLFQ13129 1914 aa10.7□□□□□ -0.7
SCMH1-212ENST00000460215 RFX7Q2KHR2 1363 aa10.69□□□□□ -0.7
SCMH1-212ENST00000460215 FAM196BA6NMK8 535 aa10.69□□□□□ -0.7
SCMH1-212ENST00000460215 PBX2P40425 430 aa10.69□□□□□ -0.7
SCMH1-212ENST00000460215 KCNQ1P51787 676 aa10.69□□□□□ -0.7
SCMH1-212ENST00000460215 ERVK-9P63128 1117 aa10.69□□□□□ -0.7
SCMH1-212ENST00000460215 ERVK-24P63145 666 aa10.69□□□□□ -0.7
SCMH1-212ENST00000460215 TLE2Q04725 743 aa10.69□□□□□ -0.7
SCMH1-212ENST00000460215 MAP2K5Q13163 448 aa10.69□□□□□ -0.7
SCMH1-212ENST00000460215 CCDC129Q6ZRS4 1044 aa10.69□□□□□ -0.7
SCMH1-212ENST00000460215 PAGR1Q9BTK6 254 aa10.69□□□□□ -0.7
SCMH1-212ENST00000460215 TBC1D2Q9BYX2 928 aa10.69□□□□□ -0.7
SCMH1-212ENST00000460215 C11orf16Q9NQ32 467 aa10.69□□□□□ -0.7
SCMH1-212ENST00000460215 FLRT1Q9NZU1 646 aa10.69□□□□□ -0.7
SCMH1-212ENST00000460215 TACC3Q9Y6A5 838 aa10.69□□□□□ -0.7
SCMH1-212ENST00000460215 GPR37L1O60883 481 aa10.68□□□□□ -0.7
SCMH1-212ENST00000460215 LDHBP07195 334 aaKnown RBP10.68□□□□□ -0.7
SCMH1-212ENST00000460215 CLTBP09497 229 aa10.68□□□□□ -0.7
SCMH1-212ENST00000460215 RAG1P15918 1043 aa10.68□□□□□ -0.7
SCMH1-212ENST00000460215 CYP2C19P33261 490 aa10.68□□□□□ -0.7
SCMH1-212ENST00000460215 ADCYAP1R1P41586 468 aa10.68□□□□□ -0.7
SCMH1-212ENST00000460215 ATP2B2Q01814 1243 aa10.68□□□□□ -0.7
SCMH1-212ENST00000460215 PICALMQ13492 652 aa10.68□□□□□ -0.7
SCMH1-212ENST00000460215 SH3D19Q5HYK7 790 aa10.68□□□□□ -0.7
SCMH1-212ENST00000460215 MICALL1Q8N3F8 863 aa10.68□□□□□ -0.7
SCMH1-212ENST00000460215 FERMT2Q96AC1 680 aa10.68□□□□□ -0.7
SCMH1-212ENST00000460215 EDC3Q96F86 508 aaKnown RBP10.68□□□□□ -0.7
SCMH1-212ENST00000460215 PBX4Q9BYU1 374 aa10.68□□□□□ -0.7
SCMH1-212ENST00000460215 OSBPL5Q9H0X9 879 aaPredicted RBP10.68□□□□□ -0.7
SCMH1-212ENST00000460215 RBPJLQ9UBG7 517 aa10.68□□□□□ -0.7
SCMH1-212ENST00000460215 CACNA1FO60840 1977 aa10.68□□□□□ -0.7
SCMH1-212ENST00000460215 USP17L5A8MUK1 530 aa10.67□□□□□ -0.7
SCMH1-212ENST00000460215 GRXCR1A8MXD5 290 aa10.67□□□□□ -0.7
SCMH1-212ENST00000460215 GRM8O00222 908 aa10.67□□□□□ -0.7
SCMH1-212ENST00000460215 KIAA0355O15063 1070 aa10.67□□□□□ -0.7
SCMH1-212ENST00000460215 GLRX3O76003 335 aaKnown RBP10.67□□□□□ -0.7
SCMH1-212ENST00000460215 PDE8BO95263 885 aa10.67□□□□□ -0.7
SCMH1-212ENST00000460215 HOXA7P31268 230 aaPredicted RBP10.67□□□□□ -0.7
SCMH1-212ENST00000460215 MTMR2Q13614 643 aa10.67□□□□□ -0.7
SCMH1-212ENST00000460215 Q3C1V9 767 aa10.67□□□□□ -0.7
SCMH1-212ENST00000460215 ALDH1L2Q3SY69 923 aa10.67□□□□□ -0.7
SCMH1-212ENST00000460215 WDR78Q5VTH9 848 aa10.67□□□□□ -0.7
SCMH1-212ENST00000460215 ANO1Q5XXA6 986 aa10.67□□□□□ -0.7
SCMH1-212ENST00000460215 TRPV1Q8NER1 839 aa10.67□□□□□ -0.7
SCMH1-212ENST00000460215 SSH1Q8WYL5 1049 aa10.67□□□□□ -0.7
SCMH1-212ENST00000460215 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.67□□□□□ -0.7
SCMH1-212ENST00000460215 DDX4Q9NQI0 724 aaKnown RBP10.67□□□□□ -0.7
SCMH1-212ENST00000460215 TMOD4Q9NZQ9 345 aa10.67□□□□□ -0.7
SCMH1-212ENST00000460215 NDUFB9Q9Y6M9 179 aa10.67□□□□□ -0.7
SCMH1-212ENST00000460215 KIF16BQ96L93 1317 aa10.66□□□□□ -0.7
SCMH1-212ENST00000460215 IFIT1P09914 478 aaKnown RBP10.66□□□□□ -0.7
SCMH1-212ENST00000460215 CYBAP13498 195 aa10.66□□□□□ -0.7
SCMH1-212ENST00000460215 SKIV2LQ15477 1246 aaKnown RBP10.66□□□□□ -0.7
SCMH1-212ENST00000460215 LRRC24Q50LG9 513 aa10.66□□□□□ -0.7
SCMH1-212ENST00000460215 C1orf53Q5VUE5 145 aa10.66□□□□□ -0.7
SCMH1-212ENST00000460215 MRPL50Q8N5N7 158 aaKnown RBP10.66□□□□□ -0.7
SCMH1-212ENST00000460215 VGLL2Q8N8G2 317 aa10.66□□□□□ -0.7
SCMH1-212ENST00000460215 GTF3C2Q8WUA4 911 aaPredicted RBP10.66□□□□□ -0.7
SCMH1-212ENST00000460215 AS3MTQ9HBK9 375 aa10.66□□□□□ -0.7
SCMH1-212ENST00000460215 CHD7Q9P2D1 2997 aa10.65□□□□□ -0.7
SCMH1-212ENST00000460215 F6X3S4 739 aa10.65□□□□□ -0.7
SCMH1-212ENST00000460215 TBC1D12O60347 775 aa10.65□□□□□ -0.7
SCMH1-212ENST00000460215 PQBP1O60828 265 aaKnown RBP10.65□□□□□ -0.7
SCMH1-212ENST00000460215 CAP2P40123 477 aa10.65□□□□□ -0.7
SCMH1-212ENST00000460215 PUM3Q15397 648 aaKnown RBP10.65□□□□□ -0.7
SCMH1-212ENST00000460215 BEND3Q5T5X7 828 aa10.65□□□□□ -0.7
SCMH1-212ENST00000460215 SLC4A10Q6U841 1118 aa10.65□□□□□ -0.7
SCMH1-212ENST00000460215 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.65□□□□□ -0.7
SCMH1-212ENST00000460215 TMEM39AQ9NV64 488 aa10.65□□□□□ -0.7
SCMH1-212ENST00000460215 C9orf78Q9NZ63 289 aaPredicted RBP10.65□□□□□ -0.7
SCMH1-212ENST00000460215 XIRP2A4UGR9 3374 aa10.65□□□□□ -0.71
SCMH1-212ENST00000460215 GAKO14976 1311 aa10.64□□□□□ -0.71
SCMH1-212ENST00000460215 PTPRCP08575 1304 aa10.64□□□□□ -0.71
SCMH1-212ENST00000460215 SLC15A5A6NIM6 579 aa10.64□□□□□ -0.71
SCMH1-212ENST00000460215 SMIM22K7EJ46 135 aa10.64□□□□□ -0.71
SCMH1-212ENST00000460215 ERC2O15083 957 aa10.64□□□□□ -0.71
SCMH1-212ENST00000460215 RARSP54136 660 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms