RNA–Protein interactions for RNA: ENST00000456369.5

CHEK2-221, Transcript of checkpoint kinase 2, human

TSL 3

Gene CHEK2, Length 588 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-221	ENST00000456369	ZSCAN25	Q6NSZ9	544 aa		11.98	□□□□□ -0.49
CHEK2-221	ENST00000456369	OSBP2	Q969R2	916 aa		11.98	□□□□□ -0.49
CHEK2-221	ENST00000456369	DHX36	Q9H2U1	1008 aa	Known RBP	11.98	□□□□□ -0.49
CHEK2-221	ENST00000456369	PI4KB	Q9UBF8	816 aa		11.98	□□□□□ -0.49
CHEK2-221	ENST00000456369	PALD1	Q9ULE6	856 aa		11.98	□□□□□ -0.49
CHEK2-221	ENST00000456369	MYO5A	Q9Y4I1	1855 aa	Known RBP	11.97	□□□□□ -0.49
CHEK2-221	ENST00000456369	SPDYE5	A6NIY4	337 aa		11.97	□□□□□ -0.49
CHEK2-221	ENST00000456369	MBD4	O95243	580 aa		11.97	□□□□□ -0.49
CHEK2-221	ENST00000456369	ZFY	P08048	801 aa	Predicted RBP	11.97	□□□□□ -0.49
CHEK2-221	ENST00000456369	HSPA1A	P0DMV8	641 aa	Known RBP	11.97	□□□□□ -0.49
CHEK2-221	ENST00000456369	HSPA1B	P0DMV9	641 aa	Known RBP	11.97	□□□□□ -0.49
CHEK2-221	ENST00000456369	MFSD10	Q14728	455 aa		11.97	□□□□□ -0.49
CHEK2-221	ENST00000456369	C8orf34	Q49A92	452 aa		11.97	□□□□□ -0.49
CHEK2-221	ENST00000456369	NOL9	Q5SY16	702 aa	Known RBP	11.97	□□□□□ -0.49
CHEK2-221	ENST00000456369	APPBP2	Q92624	585 aa		11.97	□□□□□ -0.49
CHEK2-221	ENST00000456369	WNK4	Q96J92	1243 aa		11.97	□□□□□ -0.49
CHEK2-221	ENST00000456369	ARMT1	Q9H993	441 aa		11.97	□□□□□ -0.49
CHEK2-221	ENST00000456369	ELP3	Q9H9T3	547 aa		11.97	□□□□□ -0.49
CHEK2-221	ENST00000456369	PRKAB2	O43741	272 aa		11.96	□□□□□ -0.49
CHEK2-221	ENST00000456369	TM4SF4	P48230	202 aa		11.96	□□□□□ -0.49
CHEK2-221	ENST00000456369	RRP1B	Q14684	758 aa	Known RBP	11.96	□□□□□ -0.49
CHEK2-221	ENST00000456369	TICAM2	Q86XR7	235 aa		11.96	□□□□□ -0.49
CHEK2-221	ENST00000456369	FOXP4	Q8IVH2	680 aa	Predicted RBP	11.96	□□□□□ -0.49
CHEK2-221	ENST00000456369	SDR42E1	Q8WUS8	393 aa		11.96	□□□□□ -0.49
CHEK2-221	ENST00000456369	EVI5L	Q96CN4	794 aa		11.96	□□□□□ -0.49
CHEK2-221	ENST00000456369	OPTN	Q96CV9	577 aa		11.96	□□□□□ -0.49
CHEK2-221	ENST00000456369	STRBP	Q96SI9	672 aa	Known RBP	11.96	□□□□□ -0.49
CHEK2-221	ENST00000456369	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.96	□□□□□ -0.49
CHEK2-221	ENST00000456369	DNAJC18	Q9H819	358 aa		11.96	□□□□□ -0.49
CHEK2-221	ENST00000456369	DCP1A	Q9NPI6	582 aa	Predicted RBP	11.96	□□□□□ -0.49
CHEK2-221	ENST00000456369	SAP30BP	Q9UHR5	308 aa	Known RBP	11.96	□□□□□ -0.49
CHEK2-221	ENST00000456369	CSAD	Q9Y600	493 aa		11.96	□□□□□ -0.49
CHEK2-221	ENST00000456369	FAM196B	A6NMK8	535 aa		11.95	□□□□□ -0.5
CHEK2-221	ENST00000456369	CTNND1	O60716	968 aa	Known RBP	11.95	□□□□□ -0.5
CHEK2-221	ENST00000456369	HOXB3	P14651	431 aa	Predicted RBP	11.95	□□□□□ -0.5
CHEK2-221	ENST00000456369	USP5	P45974	858 aa		11.95	□□□□□ -0.5
CHEK2-221	ENST00000456369	PLCD1	P51178	756 aa		11.95	□□□□□ -0.5
CHEK2-221	ENST00000456369	ZMYM1	Q5SVZ6	1142 aa		11.95	□□□□□ -0.5
CHEK2-221	ENST00000456369	SKAP1	Q86WV1	359 aa		11.95	□□□□□ -0.5
CHEK2-221	ENST00000456369	ERO1B	Q86YB8	467 aa		11.95	□□□□□ -0.5
CHEK2-221	ENST00000456369	ZNF710	Q8N1W2	664 aa		11.95	□□□□□ -0.5
CHEK2-221	ENST00000456369	FSD1	Q9BTV5	496 aa		11.95	□□□□□ -0.5
CHEK2-221	ENST00000456369	EHD4	Q9H223	541 aa		11.95	□□□□□ -0.5
CHEK2-221	ENST00000456369	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
CHEK2-221	ENST00000456369	HERC5	Q9UII4	1024 aa	Known RBP	11.95	□□□□□ -0.5
CHEK2-221	ENST00000456369	TESPA1	A2RU30	521 aa	Predicted RBP	11.94	□□□□□ -0.5
CHEK2-221	ENST00000456369		M0R2C6	588 aa		11.94	□□□□□ -0.5
CHEK2-221	ENST00000456369	IRF6	O14896	467 aa		11.94	□□□□□ -0.5
CHEK2-221	ENST00000456369	FOXN1	O15353	648 aa		11.94	□□□□□ -0.5
CHEK2-221	ENST00000456369	GABPA	Q06546	454 aa		11.94	□□□□□ -0.5
CHEK2-221	ENST00000456369	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.94	□□□□□ -0.5
CHEK2-221	ENST00000456369	SCYL3	Q8IZE3	742 aa		11.94	□□□□□ -0.5
CHEK2-221	ENST00000456369	AIDA	Q96BJ3	306 aa		11.94	□□□□□ -0.5
CHEK2-221	ENST00000456369	SEC62	Q99442	399 aa	Known RBP	11.94	□□□□□ -0.5
CHEK2-221	ENST00000456369	ATP8A2	Q9NTI2	1148 aa		11.94	□□□□□ -0.5
CHEK2-221	ENST00000456369	OTOF	Q9HC10	1997 aa		11.93	□□□□□ -0.5
CHEK2-221	ENST00000456369	MANSC4	A6NHS7	340 aa	Predicted RBP	11.93	□□□□□ -0.5
CHEK2-221	ENST00000456369	GSG1L2	A8MUP6	293 aa		11.93	□□□□□ -0.5
CHEK2-221	ENST00000456369	GPAA1	O43292	621 aa		11.93	□□□□□ -0.5
CHEK2-221	ENST00000456369	CA12	O43570	354 aa		11.93	□□□□□ -0.5
CHEK2-221	ENST00000456369	PTPRA	P18433	802 aa		11.93	□□□□□ -0.5
CHEK2-221	ENST00000456369	CAP2	P40123	477 aa		11.93	□□□□□ -0.5
CHEK2-221	ENST00000456369	JAG1	P78504	1218 aa		11.93	□□□□□ -0.5
CHEK2-221	ENST00000456369	PPAT	Q06203	517 aa		11.93	□□□□□ -0.5
CHEK2-221	ENST00000456369	PPIL2	Q13356	520 aa		11.93	□□□□□ -0.5
CHEK2-221	ENST00000456369	SLC4A8	Q2Y0W8	1093 aa		11.93	□□□□□ -0.5
CHEK2-221	ENST00000456369	TATDN1	Q6P1N9	297 aa		11.93	□□□□□ -0.5
CHEK2-221	ENST00000456369	TTC6	Q86TZ1	520 aa		11.93	□□□□□ -0.5
CHEK2-221	ENST00000456369	PTPN18	Q99952	460 aa		11.93	□□□□□ -0.5
CHEK2-221	ENST00000456369	RNF186	Q9NXI6	227 aa		11.93	□□□□□ -0.5
CHEK2-221	ENST00000456369	MCM9	Q9NXL9	1143 aa		11.93	□□□□□ -0.5
CHEK2-221	ENST00000456369	SLC4A4	Q9Y6R1	1079 aa		11.93	□□□□□ -0.5
CHEK2-221	ENST00000456369	SMIM22	K7EJ46	135 aa		11.92	□□□□□ -0.5
CHEK2-221	ENST00000456369	FOXP2	O15409	715 aa		11.92	□□□□□ -0.5
CHEK2-221	ENST00000456369	HLA-DOA	P06340	250 aa		11.92	□□□□□ -0.5
CHEK2-221	ENST00000456369	CYP2D6	P10635	497 aa		11.92	□□□□□ -0.5
CHEK2-221	ENST00000456369	GSPT1	P15170	499 aa	Known RBP	11.92	□□□□□ -0.5
CHEK2-221	ENST00000456369	INHBE	P58166	350 aa		11.92	□□□□□ -0.5
CHEK2-221	ENST00000456369	SREBF2	Q12772	1141 aa		11.92	□□□□□ -0.5
CHEK2-221	ENST00000456369	GIMAP6	Q6P9H5	292 aa		11.92	□□□□□ -0.5
CHEK2-221	ENST00000456369	SAGE1	Q9NXZ1	904 aa		11.92	□□□□□ -0.5
CHEK2-221	ENST00000456369	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	11.92	□□□□□ -0.5
CHEK2-221	ENST00000456369	SERPINB13	Q9UIV8	391 aa		11.92	□□□□□ -0.5
CHEK2-221	ENST00000456369	KCNH4	Q9UQ05	1017 aa		11.92	□□□□□ -0.5
CHEK2-221	ENST00000456369	DDX60L	Q5H9U9	1706 aa	Known RBP	11.91	□□□□□ -0.5
CHEK2-221	ENST00000456369	SIPA1L1	O43166	1804 aa		11.91	□□□□□ -0.5
CHEK2-221	ENST00000456369	FOCAD	Q5VW36	1801 aa		11.91	□□□□□ -0.5
CHEK2-221	ENST00000456369	USP17L12	C9JPN9	530 aa		11.91	□□□□□ -0.5
CHEK2-221	ENST00000456369	USP17L21	D6R901	530 aa		11.91	□□□□□ -0.5
CHEK2-221	ENST00000456369	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
CHEK2-221	ENST00000456369	EIF5B	O60841	1220 aa	Known RBP	11.91	□□□□□ -0.5
CHEK2-221	ENST00000456369	HSPA8	P11142	646 aa	Known RBP	11.91	□□□□□ -0.5
CHEK2-221	ENST00000456369	GNAT2	P19087	354 aa		11.91	□□□□□ -0.5
CHEK2-221	ENST00000456369	SHMT1	P34896	483 aa		11.91	□□□□□ -0.5
CHEK2-221	ENST00000456369	GTF2A2	P52657	109 aa		11.91	□□□□□ -0.5
CHEK2-221	ENST00000456369	MOGS	Q13724	837 aa		11.91	□□□□□ -0.5
CHEK2-221	ENST00000456369	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.91	□□□□□ -0.5
CHEK2-221	ENST00000456369	TTC22	Q5TAA0	569 aa		11.91	□□□□□ -0.5
CHEK2-221	ENST00000456369	C12orf60	Q5U649	245 aa		11.91	□□□□□ -0.5
CHEK2-221	ENST00000456369	CTR9	Q6PD62	1173 aa		11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms