RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 MKNK2Q9HBH9 465 aa10.6□□□□□ -0.71
COL8A1-203ENST00000452013 ZCCHC17Q9NP64 241 aaKnown RBP10.6□□□□□ -0.71
COL8A1-203ENST00000452013 PRDM10Q9NQV6 1147 aa10.6□□□□□ -0.71
COL8A1-203ENST00000452013 AKAP11Q9UKA4 1901 aa10.6□□□□□ -0.71
COL8A1-203ENST00000452013 TRIM75PA6NK02 468 aa10.59□□□□□ -0.71
COL8A1-203ENST00000452013 C19orf81C9J6K1 198 aa10.59□□□□□ -0.71
COL8A1-203ENST00000452013 MPHOSPH10O00566 681 aaKnown RBP10.59□□□□□ -0.71
COL8A1-203ENST00000452013 GDF11O95390 407 aa10.59□□□□□ -0.71
COL8A1-203ENST00000452013 GH2P01242 217 aa10.59□□□□□ -0.71
COL8A1-203ENST00000452013 HSPA8P11142 646 aaKnown RBP10.59□□□□□ -0.71
COL8A1-203ENST00000452013 GSPT1P15170 499 aaKnown RBP10.59□□□□□ -0.71
COL8A1-203ENST00000452013 SHMT1P34896 483 aa10.59□□□□□ -0.71
COL8A1-203ENST00000452013 CDK8P49336 464 aa10.59□□□□□ -0.71
COL8A1-203ENST00000452013 LBX1P52954 281 aa10.59□□□□□ -0.71
COL8A1-203ENST00000452013 ALX1Q15699 326 aa10.59□□□□□ -0.71
COL8A1-203ENST00000452013 CWC27Q6UX04 472 aaKnown RBP10.59□□□□□ -0.71
COL8A1-203ENST00000452013 CCDC129Q6ZRS4 1044 aa10.59□□□□□ -0.71
COL8A1-203ENST00000452013 C16orf86Q6ZW13 317 aa10.59□□□□□ -0.71
COL8A1-203ENST00000452013 ANKRD23Q86SG2 305 aa10.59□□□□□ -0.71
COL8A1-203ENST00000452013 ZNF444Q8N0Y2 327 aaPredicted RBP10.59□□□□□ -0.71
COL8A1-203ENST00000452013 DYNLL2Q96FJ2 89 aa10.59□□□□□ -0.71
COL8A1-203ENST00000452013 PTPN18Q99952 460 aa10.59□□□□□ -0.71
COL8A1-203ENST00000452013 CFHR5Q9BXR6 569 aa10.59□□□□□ -0.71
COL8A1-203ENST00000452013 ZFYVE28Q9HCC9 887 aa10.59□□□□□ -0.71
COL8A1-203ENST00000452013 ZBTB21Q9ULJ3 1066 aa10.59□□□□□ -0.71
COL8A1-203ENST00000452013 TRPM7Q96QT4 1865 aa10.59□□□□□ -0.71
COL8A1-203ENST00000452013 CYP2D7A0A087X1C5 515 aa10.58□□□□□ -0.72
COL8A1-203ENST00000452013 A0A0D9SFI3 127 aa10.58□□□□□ -0.72
COL8A1-203ENST00000452013 A0A0G2JLL6 359 aaPredicted RBP10.58□□□□□ -0.72
COL8A1-203ENST00000452013 USP17L10C9JJH3 530 aa10.58□□□□□ -0.72
COL8A1-203ENST00000452013 IGF2BP3O00425 579 aaKnown RBP eCLIP10.58□□□□□ -0.72
COL8A1-203ENST00000452013 TBC1D8O95759 1140 aa10.58□□□□□ -0.72
COL8A1-203ENST00000452013 PDE4BQ07343 736 aa10.58□□□□□ -0.72
COL8A1-203ENST00000452013 PABPC4Q13310 644 aaKnown RBP eCLIP10.58□□□□□ -0.72
COL8A1-203ENST00000452013 RAB3GAP1Q15042 981 aa10.58□□□□□ -0.72
COL8A1-203ENST00000452013 TMEM179Q6ZVK1 233 aa10.58□□□□□ -0.72
COL8A1-203ENST00000452013 PRRT2Q7Z6L0 340 aaPredicted RBP10.58□□□□□ -0.72
COL8A1-203ENST00000452013 EPB41L4AQ9HCS5 686 aaPredicted RBP10.58□□□□□ -0.72
COL8A1-203ENST00000452013 TMOD4Q9NZQ9 345 aa10.58□□□□□ -0.72
COL8A1-203ENST00000452013 MYH13Q9UKX3 1938 aa10.58□□□□□ -0.72
COL8A1-203ENST00000452013 CCDC171Q6TFL3 1326 aa10.58□□□□□ -0.72
COL8A1-203ENST00000452013 MYH2Q9UKX2 1941 aa10.57□□□□□ -0.72
COL8A1-203ENST00000452013 BTBD19C9JJ37 291 aa10.57□□□□□ -0.72
COL8A1-203ENST00000452013 PDHXO00330 501 aa10.57□□□□□ -0.72
COL8A1-203ENST00000452013 FGAP02671 866 aa10.57□□□□□ -0.72
COL8A1-203ENST00000452013 HSPD1P10809 573 aaKnown RBP10.57□□□□□ -0.72
COL8A1-203ENST00000452013 USP14P54578 494 aa10.57□□□□□ -0.72
COL8A1-203ENST00000452013 BACE1P56817 501 aa10.57□□□□□ -0.72
COL8A1-203ENST00000452013 JAG1P78504 1218 aa10.57□□□□□ -0.72
COL8A1-203ENST00000452013 TAF1CQ15572 869 aaPredicted RBP10.57□□□□□ -0.72
COL8A1-203ENST00000452013 NOM1Q5C9Z4 860 aaKnown RBP10.57□□□□□ -0.72
COL8A1-203ENST00000452013 SH3D19Q5HYK7 790 aa10.57□□□□□ -0.72
COL8A1-203ENST00000452013 GADL1Q6ZQY3 521 aa10.57□□□□□ -0.72
COL8A1-203ENST00000452013 CCDC84Q86UT8 332 aaPredicted RBP10.57□□□□□ -0.72
COL8A1-203ENST00000452013 FAM43AQ8N2R8 423 aa10.57□□□□□ -0.72
COL8A1-203ENST00000452013 PROCA1Q8NCQ7 364 aaPredicted RBP10.57□□□□□ -0.72
COL8A1-203ENST00000452013 TSKSQ9UJT2 592 aa10.57□□□□□ -0.72
COL8A1-203ENST00000452013 POLR2AP24928 1970 aaKnown RBP10.56□□□□□ -0.72
COL8A1-203ENST00000452013 GPR25O00155 361 aa10.56□□□□□ -0.72
COL8A1-203ENST00000452013 CHMLP26374 656 aa10.56□□□□□ -0.72
COL8A1-203ENST00000452013 EVX2Q03828 476 aa10.56□□□□□ -0.72
COL8A1-203ENST00000452013 PPARAQ07869 468 aa10.56□□□□□ -0.72
COL8A1-203ENST00000452013 VPS53Q5VIR6 699 aa10.56□□□□□ -0.72
COL8A1-203ENST00000452013 GPAT2Q6NUI2 795 aa10.56□□□□□ -0.72
COL8A1-203ENST00000452013 USP17L2Q6R6M4 530 aa10.56□□□□□ -0.72
COL8A1-203ENST00000452013 ZNF589Q86UQ0 364 aaPredicted RBP10.56□□□□□ -0.72
COL8A1-203ENST00000452013 STK11IPQ8N1F8 1099 aa10.56□□□□□ -0.72
COL8A1-203ENST00000452013 SLC44A5Q8NCS7 719 aa10.56□□□□□ -0.72
COL8A1-203ENST00000452013 KANSL2Q9H9L4 492 aa10.56□□□□□ -0.72
COL8A1-203ENST00000452013 CTNNA3Q9UI47 895 aa10.56□□□□□ -0.72
COL8A1-203ENST00000452013 ANAPC4Q9UJX5 808 aa10.56□□□□□ -0.72
COL8A1-203ENST00000452013 SLC45A1Q9Y2W3 748 aa10.56□□□□□ -0.72
COL8A1-203ENST00000452013 MAST2Q6P0Q8 1798 aa10.56□□□□□ -0.72
COL8A1-203ENST00000452013 ECM29Q5VYK3 1845 aa10.56□□□□□ -0.72
COL8A1-203ENST00000452013 ZNF213O14771 459 aa10.55□□□□□ -0.72
COL8A1-203ENST00000452013 FKTNO75072 461 aa10.55□□□□□ -0.72
COL8A1-203ENST00000452013 AKR1B1P15121 316 aa10.55□□□□□ -0.72
COL8A1-203ENST00000452013 OSBPP22059 807 aa10.55□□□□□ -0.72
COL8A1-203ENST00000452013 HMGCS2P54868 508 aa10.55□□□□□ -0.72
COL8A1-203ENST00000452013 CRHR2Q13324 411 aa10.55□□□□□ -0.72
COL8A1-203ENST00000452013 MTMR2Q13614 643 aa10.55□□□□□ -0.72
COL8A1-203ENST00000452013 MOGSQ13724 837 aa10.55□□□□□ -0.72
COL8A1-203ENST00000452013 SEPT2Q15019 361 aa10.55□□□□□ -0.72
COL8A1-203ENST00000452013 ARHGEF6Q15052 776 aa10.55□□□□□ -0.72
COL8A1-203ENST00000452013 BMP2KLQ5H9B9 411 aa10.55□□□□□ -0.72
COL8A1-203ENST00000452013 FEZ1Q99689 392 aa10.55□□□□□ -0.72
COL8A1-203ENST00000452013 DSCC1Q9BVC3 393 aa10.55□□□□□ -0.72
COL8A1-203ENST00000452013 KIAA1683Q9H0B3 1180 aa10.55□□□□□ -0.72
COL8A1-203ENST00000452013 SH2D4AQ9H788 454 aa10.55□□□□□ -0.72
COL8A1-203ENST00000452013 ARHGEF10LQ9HCE6 1279 aa10.55□□□□□ -0.72
COL8A1-203ENST00000452013 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.55□□□□□ -0.72
COL8A1-203ENST00000452013 PNMA3Q9UL41 463 aa10.55□□□□□ -0.72
COL8A1-203ENST00000452013 AGTPBP1Q9UPW5 1226 aa10.55□□□□□ -0.72
COL8A1-203ENST00000452013 RAD50Q92878 1312 aa10.55□□□□□ -0.72
COL8A1-203ENST00000452013 SMIM22K7EJ46 135 aa10.54□□□□□ -0.72
COL8A1-203ENST00000452013 FOXP2O15409 715 aa10.54□□□□□ -0.72
COL8A1-203ENST00000452013 TLR2O60603 784 aa10.54□□□□□ -0.72
COL8A1-203ENST00000452013 PCP11498 1178 aaKnown RBP10.54□□□□□ -0.72
COL8A1-203ENST00000452013 RASA1P20936 1047 aa10.54□□□□□ -0.72
COL8A1-203ENST00000452013 GUCY1A2P33402 732 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms