RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 RNF40O75150 1001 aa10.1□□□□□ -0.79
LINC01961-201ENST00000449954 DDX58O95786 925 aaKnown RBP10.1□□□□□ -0.79
LINC01961-201ENST00000449954 XRCC5P13010 732 aaKnown RBP10.1□□□□□ -0.79
LINC01961-201ENST00000449954 GCLCP48506 637 aaPredicted RBP10.1□□□□□ -0.79
LINC01961-201ENST00000449954 CACNB3P54284 484 aa10.1□□□□□ -0.79
LINC01961-201ENST00000449954 AAK1Q2M2I8 961 aa10.1□□□□□ -0.79
LINC01961-201ENST00000449954 GADL1Q6ZQY3 521 aa10.1□□□□□ -0.79
LINC01961-201ENST00000449954 MIGA2Q7L4E1 593 aa10.1□□□□□ -0.79
LINC01961-201ENST00000449954 SOCS4Q8WXH5 440 aa10.1□□□□□ -0.79
LINC01961-201ENST00000449954 TEKT1Q969V4 418 aa10.1□□□□□ -0.79
LINC01961-201ENST00000449954 RNPC3Q96LT9 517 aaKnown RBP10.1□□□□□ -0.79
LINC01961-201ENST00000449954 SENP6Q9GZR1 1112 aaPredicted RBP10.1□□□□□ -0.79
LINC01961-201ENST00000449954 ZNF576Q9H609 170 aa10.1□□□□□ -0.79
LINC01961-201ENST00000449954 GJD2Q9UKL4 321 aa10.1□□□□□ -0.79
LINC01961-201ENST00000449954 FRMPD3Q5JV73 1810 aa10.1□□□□□ -0.79
LINC01961-201ENST00000449954 PTPRFP10586 1907 aa10.09□□□□□ -0.79
LINC01961-201ENST00000449954 GPR37L1O60883 481 aa10.09□□□□□ -0.79
LINC01961-201ENST00000449954 PPM1EQ8WY54 764 aa10.09□□□□□ -0.79
LINC01961-201ENST00000449954 ZDHHC15Q96MV8 337 aa10.09□□□□□ -0.79
LINC01961-201ENST00000449954 PICK1Q9NRD5 415 aa10.09□□□□□ -0.79
LINC01961-201ENST00000449954 CXXC1Q9P0U4 656 aaPredicted RBP10.09□□□□□ -0.79
LINC01961-201ENST00000449954 AGTPBP1Q9UPW5 1226 aa10.09□□□□□ -0.79
LINC01961-201ENST00000449954 AK9Q5TCS8 1911 aa10.08□□□□□ -0.8
LINC01961-201ENST00000449954 SNAP23O00161 211 aa10.08□□□□□ -0.8
LINC01961-201ENST00000449954 TAF5LO75529 589 aa10.08□□□□□ -0.8
LINC01961-201ENST00000449954 ZKSCAN1P17029 563 aaPredicted RBP10.08□□□□□ -0.8
LINC01961-201ENST00000449954 RIPK4P57078 832 aa10.08□□□□□ -0.8
LINC01961-201ENST00000449954 RTP1P59025 263 aa10.08□□□□□ -0.8
LINC01961-201ENST00000449954 PDE3AQ14432 1141 aa10.08□□□□□ -0.8
LINC01961-201ENST00000449954 TDRD7Q8NHU6 1098 aaKnown RBP10.08□□□□□ -0.8
LINC01961-201ENST00000449954 FAM151AQ8WW52 585 aa10.08□□□□□ -0.8
LINC01961-201ENST00000449954 BADQ92934 168 aa10.08□□□□□ -0.8
LINC01961-201ENST00000449954 NECAB3Q96P71 396 aaPredicted RBP10.08□□□□□ -0.8
LINC01961-201ENST00000449954 PLA2G12BQ9BX93 195 aa10.08□□□□□ -0.8
LINC01961-201ENST00000449954 ZHX2Q9Y6X8 837 aa10.08□□□□□ -0.8
LINC01961-201ENST00000449954 MAST3O60307 1309 aa10.07□□□□□ -0.8
LINC01961-201ENST00000449954 PLXNB2O15031 1838 aa10.07□□□□□ -0.8
LINC01961-201ENST00000449954 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.07□□□□□ -0.8
LINC01961-201ENST00000449954 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.07□□□□□ -0.8
LINC01961-201ENST00000449954 DNM1LO00429 736 aa10.07□□□□□ -0.8
LINC01961-201ENST00000449954 MSCO60682 206 aa10.07□□□□□ -0.8
LINC01961-201ENST00000449954 BMP1P13497 986 aa10.07□□□□□ -0.8
LINC01961-201ENST00000449954 CACNB2Q08289 660 aaPredicted RBP10.07□□□□□ -0.8
LINC01961-201ENST00000449954 NEXNQ0ZGT2 675 aa10.07□□□□□ -0.8
LINC01961-201ENST00000449954 SCYL3Q8IZE3 742 aa10.07□□□□□ -0.8
LINC01961-201ENST00000449954 TBC1D22AQ8WUA7 517 aa10.07□□□□□ -0.8
LINC01961-201ENST00000449954 TIFAQ96CG3 184 aa10.07□□□□□ -0.8
LINC01961-201ENST00000449954 NUDT12Q9BQG2 462 aa10.07□□□□□ -0.8
LINC01961-201ENST00000449954 MRIQ9BWK5 157 aa10.07□□□□□ -0.8
LINC01961-201ENST00000449954 EPHX3Q9H6B9 360 aa10.07□□□□□ -0.8
LINC01961-201ENST00000449954 PHAXQ9H814 394 aaKnown RBP10.07□□□□□ -0.8
LINC01961-201ENST00000449954 PRDM5Q9NQX1 630 aaPredicted RBP10.07□□□□□ -0.8
LINC01961-201ENST00000449954 ATP11BQ9Y2G3 1177 aa10.07□□□□□ -0.8
LINC01961-201ENST00000449954 AFG3L2Q9Y4W6 797 aa10.07□□□□□ -0.8
LINC01961-201ENST00000449954 CHD9Q3L8U1 2897 aa10.07□□□□□ -0.8
LINC01961-201ENST00000449954 ANKRD18BA2A2Z9 1011 aa10.06□□□□□ -0.8
LINC01961-201ENST00000449954 PTPRAP18433 802 aa10.06□□□□□ -0.8
LINC01961-201ENST00000449954 FOXK2Q01167 660 aa10.06□□□□□ -0.8
LINC01961-201ENST00000449954 SWT1Q5T5J6 900 aaKnown RBP10.06□□□□□ -0.8
LINC01961-201ENST00000449954 DUSP27Q5VZP5 1158 aa10.06□□□□□ -0.8
LINC01961-201ENST00000449954 UBE3BQ7Z3V4 1068 aa10.06□□□□□ -0.8
LINC01961-201ENST00000449954 PROCA1Q8NCQ7 364 aaPredicted RBP10.06□□□□□ -0.8
LINC01961-201ENST00000449954 REV3LO60673 3130 aa10.05□□□□□ -0.8
LINC01961-201ENST00000449954 IGKV5-2P06315 115 aa10.05□□□□□ -0.8
LINC01961-201ENST00000449954 CSF1RP07333 972 aa10.05□□□□□ -0.8
LINC01961-201ENST00000449954 CYP2B6P20813 491 aa10.05□□□□□ -0.8
LINC01961-201ENST00000449954 CCND3P30281 292 aaPredicted RBP10.05□□□□□ -0.8
LINC01961-201ENST00000449954 HIBADHP31937 336 aaKnown RBP10.05□□□□□ -0.8
LINC01961-201ENST00000449954 PABPC4Q13310 644 aaKnown RBP eCLIP10.05□□□□□ -0.8
LINC01961-201ENST00000449954 APOBEC3HQ6NTF7 200 aaKnown RBP10.05□□□□□ -0.8
LINC01961-201ENST00000449954 PDLIM7Q9NR12 457 aa10.05□□□□□ -0.8
LINC01961-201ENST00000449954 MAP3K2Q9Y2U5 619 aa10.05□□□□□ -0.8
LINC01961-201ENST00000449954 LOC285556D6RIA3 1793 aa10.05□□□□□ -0.8
LINC01961-201ENST00000449954 MYBBP1AQ9BQG0 1328 aaKnown RBP10.05□□□□□ -0.8
LINC01961-201ENST00000449954 CLSPNQ9HAW4 1339 aa10.05□□□□□ -0.8
LINC01961-201ENST00000449954 DOCK1Q14185 1865 aa10.04□□□□□ -0.8
LINC01961-201ENST00000449954 WDFY4Q6ZS81 3184 aa10.04□□□□□ -0.8
LINC01961-201ENST00000449954 RLFQ13129 1914 aa10.04□□□□□ -0.8
LINC01961-201ENST00000449954 H7C1W4 665 aa10.04□□□□□ -0.8
LINC01961-201ENST00000449954 SNX17Q15036 470 aa10.04□□□□□ -0.8
LINC01961-201ENST00000449954 LPAR1Q92633 364 aa10.04□□□□□ -0.8
LINC01961-201ENST00000449954 APBA2Q99767 749 aa10.04□□□□□ -0.8
LINC01961-201ENST00000449954 CHMP4AQ9BY43 222 aa10.04□□□□□ -0.8
LINC01961-201ENST00000449954 KCNH6Q9H252 994 aa10.04□□□□□ -0.8
LINC01961-201ENST00000449954 PRDM12Q9H4Q4 367 aa10.04□□□□□ -0.8
LINC01961-201ENST00000449954 C11orf16Q9NQ32 467 aa10.04□□□□□ -0.8
LINC01961-201ENST00000449954 MORF4L1Q9UBU8 362 aa10.04□□□□□ -0.8
LINC01961-201ENST00000449954 SUGT1Q9Y2Z0 365 aa10.04□□□□□ -0.8
LINC01961-201ENST00000449954 ADGRG1Q9Y653 693 aa10.04□□□□□ -0.8
LINC01961-201ENST00000449954 DOCK2Q92608 1830 aa10.04□□□□□ -0.8
LINC01961-201ENST00000449954 CHD7Q9P2D1 2997 aa10.04□□□□□ -0.8
LINC01961-201ENST00000449954 ATRNL1Q5VV63 1379 aa10.03□□□□□ -0.8
LINC01961-201ENST00000449954 PHIPQ8WWQ0 1821 aa10.03□□□□□ -0.8
LINC01961-201ENST00000449954 TCF20Q9UGU0 1960 aaKnown RBP10.03□□□□□ -0.8
LINC01961-201ENST00000449954 TRIM75PA6NK02 468 aa10.03□□□□□ -0.8
LINC01961-201ENST00000449954 NEURL1BA8MQ27 555 aa10.03□□□□□ -0.8
LINC01961-201ENST00000449954 PRR33A8MZF0 331 aa10.03□□□□□ -0.8
LINC01961-201ENST00000449954 RGS2P41220 211 aa10.03□□□□□ -0.8
LINC01961-201ENST00000449954 TMPOP42166 694 aaKnown RBP10.03□□□□□ -0.8
LINC01961-201ENST00000449954 SLC4A3P48751 1232 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms