RNA–Protein interactions for RNA: ENST00000449504.5

HDLBP-222, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-222ENST00000449504 HSFX4A0A1B0GTS1 333 aaPredicted RBP9□□□□□ -0.97
HDLBP-222ENST00000449504 HSFX3A0A1B0GWH4 333 aaPredicted RBP9□□□□□ -0.97
HDLBP-222ENST00000449504 KBTBD13C9JR72 458 aa9□□□□□ -0.97
HDLBP-222ENST00000449504 MSCO60682 206 aa9□□□□□ -0.97
HDLBP-222ENST00000449504 SLC5A1P13866 664 aa9□□□□□ -0.97
HDLBP-222ENST00000449504 CYP2C19P33261 490 aa9□□□□□ -0.97
HDLBP-222ENST00000449504 ERVK-9P63128 1117 aa9□□□□□ -0.97
HDLBP-222ENST00000449504 ERVK-24P63145 666 aa9□□□□□ -0.97
HDLBP-222ENST00000449504 MAP2K5Q13163 448 aa9□□□□□ -0.97
HDLBP-222ENST00000449504 MKRN4PQ13434 485 aaPredicted RBP9□□□□□ -0.97
HDLBP-222ENST00000449504 MTMR2Q13614 643 aa9□□□□□ -0.97
HDLBP-222ENST00000449504 SH3D19Q5HYK7 790 aa9□□□□□ -0.97
HDLBP-222ENST00000449504 CCDC129Q6ZRS4 1044 aa9□□□□□ -0.97
HDLBP-222ENST00000449504 ARRDC4Q8NCT1 418 aa9□□□□□ -0.97
HDLBP-222ENST00000449504 TIFAQ96CG3 184 aa9□□□□□ -0.97
HDLBP-222ENST00000449504 KAZALD1Q96I82 304 aa9□□□□□ -0.97
HDLBP-222ENST00000449504 LRFN3Q9BTN0 628 aa9□□□□□ -0.97
HDLBP-222ENST00000449504 OSBPL5Q9H0X9 879 aaPredicted RBP9□□□□□ -0.97
HDLBP-222ENST00000449504 PRDM12Q9H4Q4 367 aa9□□□□□ -0.97
HDLBP-222ENST00000449504 BICC1Q9H694 974 aaKnown RBP9□□□□□ -0.97
HDLBP-222ENST00000449504 AS3MTQ9HBK9 375 aa9□□□□□ -0.97
HDLBP-222ENST00000449504 SYNGAP1Q96PV0 1343 aa9□□□□□ -0.97
HDLBP-222ENST00000449504 PLXNB2O15031 1838 aa8.99□□□□□ -0.97
HDLBP-222ENST00000449504 NBPF7P0C2Y1 421 aaPredicted RBP8.99□□□□□ -0.97
HDLBP-222ENST00000449504 FGFR2P21802 821 aa8.99□□□□□ -0.97
HDLBP-222ENST00000449504 ITGB8P26012 769 aa8.99□□□□□ -0.97
HDLBP-222ENST00000449504 CAP2P40123 477 aa8.99□□□□□ -0.97
HDLBP-222ENST00000449504 ADCYAP1R1P41586 468 aa8.99□□□□□ -0.97
HDLBP-222ENST00000449504 TLE2Q04725 743 aa8.99□□□□□ -0.97
HDLBP-222ENST00000449504 RRP1BQ14684 758 aaKnown RBP8.99□□□□□ -0.97
HDLBP-222ENST00000449504 DZIP1Q86YF9 867 aaKnown RBP8.99□□□□□ -0.97
HDLBP-222ENST00000449504 TBC1D2Q9BYX2 928 aa8.99□□□□□ -0.97
HDLBP-222ENST00000449504 EPHX3Q9H6B9 360 aa8.99□□□□□ -0.97
HDLBP-222ENST00000449504 GNL3LQ9NVN8 582 aaKnown RBP8.99□□□□□ -0.97
HDLBP-222ENST00000449504 TTC28Q96AY4 2481 aa8.98□□□□□ -0.97
HDLBP-222ENST00000449504 TBC1D12O60347 775 aa8.98□□□□□ -0.97
HDLBP-222ENST00000449504 ALDH1L1O75891 902 aa8.98□□□□□ -0.97
HDLBP-222ENST00000449504 GLRX3O76003 335 aaKnown RBP8.98□□□□□ -0.97
HDLBP-222ENST00000449504 ATXN8OSP0DMR3 200 aa8.98□□□□□ -0.97
HDLBP-222ENST00000449504 RAG1P15918 1043 aa8.98□□□□□ -0.97
HDLBP-222ENST00000449504 HOXA7P31268 230 aaPredicted RBP8.98□□□□□ -0.97
HDLBP-222ENST00000449504 BTDP43251 543 aa8.98□□□□□ -0.97
HDLBP-222ENST00000449504 AKNAD1Q5T1N1 836 aa8.98□□□□□ -0.97
HDLBP-222ENST00000449504 TRPV1Q8NER1 839 aa8.98□□□□□ -0.97
HDLBP-222ENST00000449504 LPIN2Q92539 896 aa8.98□□□□□ -0.97
HDLBP-222ENST00000449504 SRCIN1Q9C0H9 1055 aa8.98□□□□□ -0.97
HDLBP-222ENST00000449504 ABCF2Q9UG63 623 aa8.98□□□□□ -0.97
HDLBP-222ENST00000449504 TACC3Q9Y6A5 838 aa8.98□□□□□ -0.97
HDLBP-222ENST00000449504 MAST2Q6P0Q8 1798 aa8.98□□□□□ -0.97
HDLBP-222ENST00000449504 UTYO14607 1347 aa8.98□□□□□ -0.97
HDLBP-222ENST00000449504 PRUNE2Q8WUY3 3088 aa8.98□□□□□ -0.97
HDLBP-222ENST00000449504 DOCK1Q14185 1865 aa8.98□□□□□ -0.97
HDLBP-222ENST00000449504 PTPRFP10586 1907 aa8.97□□□□□ -0.97
HDLBP-222ENST00000449504 LTBP2Q14767 1821 aa8.97□□□□□ -0.97
HDLBP-222ENST00000449504 DOCK2Q92608 1830 aa8.97□□□□□ -0.97
HDLBP-222ENST00000449504 GRXCR1A8MXD5 290 aa8.97□□□□□ -0.97
HDLBP-222ENST00000449504 VAMP4O75379 141 aa8.97□□□□□ -0.97
HDLBP-222ENST00000449504 CLTBP09497 229 aa8.97□□□□□ -0.97
HDLBP-222ENST00000449504 PBX2P40425 430 aa8.97□□□□□ -0.97
HDLBP-222ENST00000449504 BACE1P56817 501 aa8.97□□□□□ -0.97
HDLBP-222ENST00000449504 FPGSQ05932 587 aa8.97□□□□□ -0.97
HDLBP-222ENST00000449504 MICALL1Q8N3F8 863 aa8.97□□□□□ -0.97
HDLBP-222ENST00000449504 NPLOC4Q8TAT6 608 aa8.97□□□□□ -0.97
HDLBP-222ENST00000449504 TSPYL2Q9H2G4 693 aaPredicted RBP8.97□□□□□ -0.97
HDLBP-222ENST00000449504 DENND2AQ9ULE3 1009 aa8.97□□□□□ -0.97
HDLBP-222ENST00000449504 ARIH1Q9Y4X5 557 aaPredicted RBP8.97□□□□□ -0.97
HDLBP-222ENST00000449504 IVNS1ABPQ9Y6Y0 642 aa8.97□□□□□ -0.97
HDLBP-222ENST00000449504 GAKO14976 1311 aa8.97□□□□□ -0.97
HDLBP-222ENST00000449504 KIF16BQ96L93 1317 aa8.97□□□□□ -0.97
HDLBP-222ENST00000449504 PHIPQ8WWQ0 1821 aa8.96□□□□□ -0.97
HDLBP-222ENST00000449504 SLC15A5A6NIM6 579 aa8.96□□□□□ -0.98
HDLBP-222ENST00000449504 PQBP1O60828 265 aaKnown RBP8.96□□□□□ -0.98
HDLBP-222ENST00000449504 BMP1P13497 986 aa8.96□□□□□ -0.98
HDLBP-222ENST00000449504 PTPREP23469 700 aa8.96□□□□□ -0.98
HDLBP-222ENST00000449504 CCNA1P78396 465 aa8.96□□□□□ -0.98
HDLBP-222ENST00000449504 TFF2Q03403 129 aa8.96□□□□□ -0.98
HDLBP-222ENST00000449504 ADGRE1Q14246 886 aa8.96□□□□□ -0.98
HDLBP-222ENST00000449504 SNX17Q15036 470 aa8.96□□□□□ -0.98
HDLBP-222ENST00000449504 SKIV2LQ15477 1246 aaKnown RBP8.96□□□□□ -0.98
HDLBP-222ENST00000449504 TMEM31Q5JXX7 168 aa8.96□□□□□ -0.98
HDLBP-222ENST00000449504 SLF2Q8IX21 1173 aa8.96□□□□□ -0.98
HDLBP-222ENST00000449504 ZGPATQ8N5A5 531 aaKnown RBP8.96□□□□□ -0.98
HDLBP-222ENST00000449504 ANKRD44Q8N8A2 993 aa8.96□□□□□ -0.98
HDLBP-222ENST00000449504 WDR18Q9BV38 432 aa8.96□□□□□ -0.98
HDLBP-222ENST00000449504 TMEM39AQ9NV64 488 aa8.96□□□□□ -0.98
HDLBP-222ENST00000449504 SSUH2Q9Y2M2 353 aa8.96□□□□□ -0.98
HDLBP-222ENST00000449504 RFX7Q2KHR2 1363 aa8.96□□□□□ -0.98
HDLBP-222ENST00000449504 C19orf81C9J6K1 198 aa8.95□□□□□ -0.98
HDLBP-222ENST00000449504 USP17L10C9JJH3 530 aa8.95□□□□□ -0.98
HDLBP-222ENST00000449504 EYA2O00167 538 aa8.95□□□□□ -0.98
HDLBP-222ENST00000449504 CYBAP13498 195 aa8.95□□□□□ -0.98
HDLBP-222ENST00000449504 PHKA1P46020 1223 aa8.95□□□□□ -0.98
HDLBP-222ENST00000449504 KCNQ1P51787 676 aa8.95□□□□□ -0.98
HDLBP-222ENST00000449504 JAG1P78504 1218 aa8.95□□□□□ -0.98
HDLBP-222ENST00000449504 EXOSC9Q06265 439 aaKnown RBP8.95□□□□□ -0.98
HDLBP-222ENST00000449504 RABL6Q3YEC7 729 aaPredicted RBP8.95□□□□□ -0.98
HDLBP-222ENST00000449504 PRAMEF19Q5SWL8 479 aa8.95□□□□□ -0.98
HDLBP-222ENST00000449504 DPP9Q86TI2 863 aa8.95□□□□□ -0.98
HDLBP-222ENST00000449504 GTF3C2Q8WUA4 911 aaPredicted RBP8.95□□□□□ -0.98
HDLBP-222ENST00000449504 SNX27Q96L92 541 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms