RNA–Protein interactions for RNA: ENST00000447872.5

VSTM1-206, Transcript of V-set and transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene VSTM1, Length 1,041 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-206ENST00000447872 PRDM6Q9NQX0 595 aa12.66□□□□□ -0.38
VSTM1-206ENST00000447872 TMOD4Q9NZQ9 345 aa12.66□□□□□ -0.38
VSTM1-206ENST00000447872 PALD1Q9ULE6 856 aa12.66□□□□□ -0.38
VSTM1-206ENST00000447872 NOP58Q9Y2X3 529 aaKnown RBP12.66□□□□□ -0.38
VSTM1-206ENST00000447872 NR2E3Q9Y5X4 410 aa12.66□□□□□ -0.38
VSTM1-206ENST00000447872 ZBTB7BO15156 539 aaPredicted RBP12.65□□□□□ -0.38
VSTM1-206ENST00000447872 CYP7A1P22680 504 aa12.65□□□□□ -0.38
VSTM1-206ENST00000447872 BACE1P56817 501 aa12.65□□□□□ -0.38
VSTM1-206ENST00000447872 IRX3P78415 501 aaPredicted RBP12.65□□□□□ -0.38
VSTM1-206ENST00000447872 MTMR2Q13614 643 aa12.65□□□□□ -0.38
VSTM1-206ENST00000447872 ADGRA1Q86SQ6 560 aa12.65□□□□□ -0.38
VSTM1-206ENST00000447872 METTL16Q86W50 562 aaKnown RBP12.65□□□□□ -0.38
VSTM1-206ENST00000447872 DEFB118Q96PH6 123 aa12.65□□□□□ -0.38
VSTM1-206ENST00000447872 PIH1D3Q9NQM4 214 aaKnown RBP12.65□□□□□ -0.38
VSTM1-206ENST00000447872 GINM1Q9NU53 330 aa12.65□□□□□ -0.38
VSTM1-206ENST00000447872 RBM27Q9P2N5 1060 aaKnown RBP12.65□□□□□ -0.38
VSTM1-206ENST00000447872 FLT1P17948 1338 aa12.64□□□□□ -0.39
VSTM1-206ENST00000447872 RBBP6Q7Z6E9 1792 aaKnown RBP12.64□□□□□ -0.39
VSTM1-206ENST00000447872 C19orf81C9J6K1 198 aa12.64□□□□□ -0.39
VSTM1-206ENST00000447872 IDH1O75874 414 aaKnown RBP12.64□□□□□ -0.39
VSTM1-206ENST00000447872 HLA-DOAP06340 250 aa12.64□□□□□ -0.39
VSTM1-206ENST00000447872 PDE4AP27815 886 aa12.64□□□□□ -0.39
VSTM1-206ENST00000447872 CERS3Q8IU89 383 aa12.64□□□□□ -0.39
VSTM1-206ENST00000447872 CCDC8Q9H0W5 538 aaPredicted RBP12.64□□□□□ -0.39
VSTM1-206ENST00000447872 SAP30BPQ9UHR5 308 aaKnown RBP12.64□□□□□ -0.39
VSTM1-206ENST00000447872 DBNLQ9UJU6 430 aaKnown RBP12.64□□□□□ -0.39
VSTM1-206ENST00000447872 LAMA3Q16787 3333 aa12.64□□□□□ -0.39
VSTM1-206ENST00000447872 AK9Q5TCS8 1911 aa12.63□□□□□ -0.39
VSTM1-206ENST00000447872 MYH13Q9UKX3 1938 aa12.63□□□□□ -0.39
VSTM1-206ENST00000447872 USP17L10C9JJH3 530 aa12.63□□□□□ -0.39
VSTM1-206ENST00000447872 RLBP1P12271 317 aa12.63□□□□□ -0.39
VSTM1-206ENST00000447872 HOXA7P31268 230 aaPredicted RBP12.63□□□□□ -0.39
VSTM1-206ENST00000447872 EAF2Q96CJ1 260 aaPredicted RBP12.63□□□□□ -0.39
VSTM1-206ENST00000447872 P2RX7Q99572 595 aaKnown RBP12.63□□□□□ -0.39
VSTM1-206ENST00000447872 BACH2Q9BYV9 841 aa12.63□□□□□ -0.39
VSTM1-206ENST00000447872 PAK6Q9NQU5 681 aaPredicted RBP12.63□□□□□ -0.39
VSTM1-206ENST00000447872 MORF4L1Q9UBU8 362 aa12.63□□□□□ -0.39
VSTM1-206ENST00000447872 GJD2Q9UKL4 321 aa12.63□□□□□ -0.39
VSTM1-206ENST00000447872 ZSWIM8A7E2V4 1837 aa12.62□□□□□ -0.39
VSTM1-206ENST00000447872 MYH2Q9UKX2 1941 aa12.62□□□□□ -0.39
VSTM1-206ENST00000447872 EVI5O60447 810 aa12.62□□□□□ -0.39
VSTM1-206ENST00000447872 GDF11O95390 407 aa12.62□□□□□ -0.39
VSTM1-206ENST00000447872 HMGCRP04035 888 aa12.62□□□□□ -0.39
VSTM1-206ENST00000447872 USP5P45974 858 aa12.62□□□□□ -0.39
VSTM1-206ENST00000447872 DYNLL1P63167 89 aaKnown RBP12.62□□□□□ -0.39
VSTM1-206ENST00000447872 JAG1P78504 1218 aa12.62□□□□□ -0.39
VSTM1-206ENST00000447872 MAP3K12Q12852 859 aa12.62□□□□□ -0.39
VSTM1-206ENST00000447872 TMED8Q6PL24 325 aaPredicted RBP12.62□□□□□ -0.39
VSTM1-206ENST00000447872 ERC1Q8IUD2 1116 aa12.62□□□□□ -0.39
VSTM1-206ENST00000447872 CCAR1Q8IX12 1150 aaKnown RBP12.62□□□□□ -0.39
VSTM1-206ENST00000447872 MIGA1Q8NAN2 632 aa12.62□□□□□ -0.39
VSTM1-206ENST00000447872 GPRC5AQ8NFJ5 357 aa12.62□□□□□ -0.39
VSTM1-206ENST00000447872 CRISPLD2Q9H0B8 497 aa12.62□□□□□ -0.39
VSTM1-206ENST00000447872 DNAJC18Q9H819 358 aa12.62□□□□□ -0.39
VSTM1-206ENST00000447872 TLR7Q9NYK1 1049 aaKnown RBP12.62□□□□□ -0.39
VSTM1-206ENST00000447872 ZBTB21Q9ULJ3 1066 aa12.62□□□□□ -0.39
VSTM1-206ENST00000447872 ANP32AP39687 249 aaKnown RBP12.61□□□□□ -0.39
VSTM1-206ENST00000447872 HERVK_113P62684 666 aa12.61□□□□□ -0.39
VSTM1-206ENST00000447872 HSP90AB4PQ58FF6 505 aa12.61□□□□□ -0.39
VSTM1-206ENST00000447872 CEP85Q6P2H3 762 aa12.61□□□□□ -0.39
VSTM1-206ENST00000447872 AACSQ86V21 672 aa12.61□□□□□ -0.39
VSTM1-206ENST00000447872 MAGEB6Q8N7X4 407 aa12.61□□□□□ -0.39
VSTM1-206ENST00000447872 PANK1Q8TE04 598 aa12.61□□□□□ -0.39
VSTM1-206ENST00000447872 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.61□□□□□ -0.39
VSTM1-206ENST00000447872 HMX1Q9NP08 348 aaPredicted RBP12.61□□□□□ -0.39
VSTM1-206ENST00000447872 RPTORQ8N122 1335 aa12.61□□□□□ -0.39
VSTM1-206ENST00000447872 GH2P01242 217 aa12.6□□□□□ -0.39
VSTM1-206ENST00000447872 MAPK4P31152 587 aa12.6□□□□□ -0.39
VSTM1-206ENST00000447872 AAMPQ13685 434 aa12.6□□□□□ -0.39
VSTM1-206ENST00000447872 SHROOM1Q2M3G4 852 aaPredicted RBP12.6□□□□□ -0.39
VSTM1-206ENST00000447872 USP17L2Q6R6M4 530 aa12.6□□□□□ -0.39
VSTM1-206ENST00000447872 NECAB2Q7Z6G3 386 aa12.6□□□□□ -0.39
VSTM1-206ENST00000447872 TTC6Q86TZ1 520 aa12.6□□□□□ -0.39
VSTM1-206ENST00000447872 SKAP1Q86WV1 359 aa12.6□□□□□ -0.39
VSTM1-206ENST00000447872 GTF3C2Q8WUA4 911 aaPredicted RBP12.6□□□□□ -0.39
VSTM1-206ENST00000447872 PAWRQ96IZ0 340 aaKnown RBP12.6□□□□□ -0.39
VSTM1-206ENST00000447872 NUDT12Q9BQG2 462 aa12.6□□□□□ -0.39
VSTM1-206ENST00000447872 DOCK2Q92608 1830 aa12.6□□□□□ -0.39
VSTM1-206ENST00000447872 XRCC5P13010 732 aaKnown RBP12.59□□□□□ -0.39
VSTM1-206ENST00000447872 CYP2B6P20813 491 aa12.59□□□□□ -0.39
VSTM1-206ENST00000447872 TRMT44Q8IYL2 757 aaKnown RBP12.59□□□□□ -0.39
VSTM1-206ENST00000447872 ANKLE1Q8NAG6 615 aa12.59□□□□□ -0.39
VSTM1-206ENST00000447872 SOCS4Q8WXH5 440 aa12.59□□□□□ -0.39
VSTM1-206ENST00000447872 FEZ1Q99689 392 aa12.59□□□□□ -0.39
VSTM1-206ENST00000447872 ANTXR1Q9H6X2 564 aa12.59□□□□□ -0.39
VSTM1-206ENST00000447872 TXNRD2Q9NNW7 524 aa12.59□□□□□ -0.39
VSTM1-206ENST00000447872 EMILIN3Q9NT22 766 aa12.59□□□□□ -0.39
VSTM1-206ENST00000447872 RBPJLQ9UBG7 517 aa12.59□□□□□ -0.39
VSTM1-206ENST00000447872 SERPINB13Q9UIV8 391 aa12.59□□□□□ -0.39
VSTM1-206ENST00000447872 EXOC6BQ9Y2D4 811 aa12.59□□□□□ -0.39
VSTM1-206ENST00000447872 COG6Q9Y2V7 657 aa12.59□□□□□ -0.39
VSTM1-206ENST00000447872 PEX10O60683 326 aa12.58□□□□□ -0.4
VSTM1-206ENST00000447872 ERVK-9P63128 1117 aa12.58□□□□□ -0.4
VSTM1-206ENST00000447872 ERVK-24P63145 666 aa12.58□□□□□ -0.4
VSTM1-206ENST00000447872 RAB3GAP1Q15042 981 aa12.58□□□□□ -0.4
VSTM1-206ENST00000447872 TTF1Q15361 905 aaPredicted RBP12.58□□□□□ -0.4
VSTM1-206ENST00000447872 CERKLQ49MI3 558 aaPredicted RBP12.58□□□□□ -0.4
VSTM1-206ENST00000447872 TATDN1Q6P1N9 297 aa12.58□□□□□ -0.4
VSTM1-206ENST00000447872 PAGR1Q9BTK6 254 aa12.58□□□□□ -0.4
VSTM1-206ENST00000447872 EHD4Q9H223 541 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms