RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 PPP1R42Q7Z4L9 355 aa4.42□□□□□ -1.7
PMS1-215ENST00000447232 APOBEC3FQ8IUX4 373 aaKnown RBP4.42□□□□□ -1.7
PMS1-215ENST00000447232 TBC1D16Q8TBP0 767 aa4.42□□□□□ -1.7
PMS1-215ENST00000447232 RAET1EQ8TD07 263 aa4.42□□□□□ -1.7
PMS1-215ENST00000447232 ASB2Q96Q27 587 aa4.42□□□□□ -1.7
PMS1-215ENST00000447232 TRIM34Q9BYJ4 488 aa4.42□□□□□ -1.7
PMS1-215ENST00000447232 FIGNL2A6NMB9 653 aa4.41□□□□□ -1.7
PMS1-215ENST00000447232 TFRCP02786 760 aaKnown RBP4.41□□□□□ -1.7
PMS1-215ENST00000447232 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.41□□□□□ -1.7
PMS1-215ENST00000447232 C17orf99Q6UX52 265 aa4.41□□□□□ -1.7
PMS1-215ENST00000447232 DDX46Q7L014 1031 aaKnown RBP4.41□□□□□ -1.7
PMS1-215ENST00000447232 ZBED3Q96IU2 234 aaPredicted RBP4.41□□□□□ -1.7
PMS1-215ENST00000447232 DEFB118Q96PH6 123 aa4.41□□□□□ -1.7
PMS1-215ENST00000447232 ZCCHC17Q9NP64 241 aaKnown RBP4.41□□□□□ -1.7
PMS1-215ENST00000447232 MYPNQ86TC9 1320 aa4.41□□□□□ -1.7
PMS1-215ENST00000447232 BTBD11A6QL63 1104 aa4.41□□□□□ -1.7
PMS1-215ENST00000447232 PPP1R12BO60237 982 aaPredicted RBP4.41□□□□□ -1.7
PMS1-215ENST00000447232 HOXD10P28358 340 aa4.41□□□□□ -1.7
PMS1-215ENST00000447232 PSMC4P43686 418 aa4.41□□□□□ -1.7
PMS1-215ENST00000447232 PTSQ03393 145 aa4.41□□□□□ -1.7
PMS1-215ENST00000447232 PARP10Q53GL7 1025 aa4.41□□□□□ -1.7
PMS1-215ENST00000447232 TTLL7Q6ZT98 887 aa4.41□□□□□ -1.7
PMS1-215ENST00000447232 IL27Q8NEV9 243 aa4.41□□□□□ -1.7
PMS1-215ENST00000447232 OPTNQ96CV9 577 aa4.41□□□□□ -1.7
PMS1-215ENST00000447232 AGBL1Q96MI9 1066 aa4.41□□□□□ -1.7
PMS1-215ENST00000447232 TMPRSS4Q9NRS4 437 aa4.41□□□□□ -1.7
PMS1-215ENST00000447232 DDX60LQ5H9U9 1706 aaKnown RBP4.41□□□□□ -1.7
PMS1-215ENST00000447232 CCL15-CCL14A0A0B4J2E2 113 aa4.4□□□□□ -1.7
PMS1-215ENST00000447232 FAM181BA6NEQ2 426 aa4.4□□□□□ -1.7
PMS1-215ENST00000447232 USP2O75604 605 aaPredicted RBP4.4□□□□□ -1.7
PMS1-215ENST00000447232 CCL15Q16663 113 aa4.4□□□□□ -1.7
PMS1-215ENST00000447232 NBPF20Q3BBV1 942 aa4.4□□□□□ -1.7
PMS1-215ENST00000447232 ANKRD13AQ8IZ07 590 aa4.4□□□□□ -1.7
PMS1-215ENST00000447232 UTP14AQ9BVJ6 771 aaKnown RBP4.4□□□□□ -1.7
PMS1-215ENST00000447232 ZC3H12CQ9C0D7 883 aaKnown RBP4.4□□□□□ -1.7
PMS1-215ENST00000447232 DEFB129Q9H1M3 183 aa4.4□□□□□ -1.7
PMS1-215ENST00000447232 C11orf16Q9NQ32 467 aa4.4□□□□□ -1.7
PMS1-215ENST00000447232 PODXL2Q9NZ53 605 aa4.4□□□□□ -1.7
PMS1-215ENST00000447232 BIN2Q9UBW5 565 aaPredicted RBP4.4□□□□□ -1.7
PMS1-215ENST00000447232 MGAMO43451 1857 aa4.4□□□□□ -1.7
PMS1-215ENST00000447232 GNAT3A8MTJ3 354 aa4.4□□□□□ -1.71
PMS1-215ENST00000447232 SASH1O94885 1247 aa4.4□□□□□ -1.71
PMS1-215ENST00000447232 HMOX1P09601 288 aa4.4□□□□□ -1.71
PMS1-215ENST00000447232 CTSOP43234 321 aaPredicted RBP4.4□□□□□ -1.71
PMS1-215ENST00000447232 MMP14P50281 582 aa4.4□□□□□ -1.71
PMS1-215ENST00000447232 GTF2A2P52657 109 aa4.4□□□□□ -1.71
PMS1-215ENST00000447232 PRKCZQ05513 592 aa4.4□□□□□ -1.71
PMS1-215ENST00000447232 TMEM259Q4ZIN3 620 aa4.4□□□□□ -1.71
PMS1-215ENST00000447232 CDCA8Q53HL2 280 aa4.4□□□□□ -1.71
PMS1-215ENST00000447232 PNMA1Q8ND90 353 aa4.4□□□□□ -1.71
PMS1-215ENST00000447232 CELF1Q92879 486 aaKnown RBP4.4□□□□□ -1.71
PMS1-215ENST00000447232 PCMTD1Q96MG8 357 aaPredicted RBP4.4□□□□□ -1.71
PMS1-215ENST00000447232 PPP2R3BQ9Y5P8 575 aa4.4□□□□□ -1.71
PMS1-215ENST00000447232 ECM29Q5VYK3 1845 aa4.39□□□□□ -1.71
PMS1-215ENST00000447232 USP17L3A6NCW0 530 aa4.39□□□□□ -1.71
PMS1-215ENST00000447232 USP17L4A6NCW7 530 aa4.39□□□□□ -1.71
PMS1-215ENST00000447232 ESPNB1AK53 854 aa4.39□□□□□ -1.71
PMS1-215ENST00000447232 ERVH48-1M5A8F1 160 aa4.39□□□□□ -1.71
PMS1-215ENST00000447232 LILRA1O75019 489 aa4.39□□□□□ -1.71
PMS1-215ENST00000447232 INHAP05111 366 aa4.39□□□□□ -1.71
PMS1-215ENST00000447232 HCLS1P14317 486 aaPredicted RBP4.39□□□□□ -1.71
PMS1-215ENST00000447232 ADD1P35611 737 aaKnown RBP4.39□□□□□ -1.71
PMS1-215ENST00000447232 IREB2P48200 963 aaKnown RBP4.39□□□□□ -1.71
PMS1-215ENST00000447232 SMAD3P84022 425 aaKnown RBP4.39□□□□□ -1.71
PMS1-215ENST00000447232 FOXK2Q01167 660 aa4.39□□□□□ -1.71
PMS1-215ENST00000447232 RELBQ01201 579 aa4.39□□□□□ -1.71
PMS1-215ENST00000447232 TMEM31Q5JXX7 168 aa4.39□□□□□ -1.71
PMS1-215ENST00000447232 USP17L1Q7RTZ2 530 aa4.39□□□□□ -1.71
PMS1-215ENST00000447232 GPR161Q8N6U8 529 aaKnown RBP4.39□□□□□ -1.71
PMS1-215ENST00000447232 KDF1Q8NAX2 398 aaPredicted RBP4.39□□□□□ -1.71
PMS1-215ENST00000447232 EPHX3Q9H6B9 360 aa4.39□□□□□ -1.71
PMS1-215ENST00000447232 ELP3Q9H9T3 547 aa4.39□□□□□ -1.71
PMS1-215ENST00000447232 THEGQ9P2T0 379 aa4.39□□□□□ -1.71
PMS1-215ENST00000447232 PFASO15067 1338 aa4.39□□□□□ -1.71
PMS1-215ENST00000447232 BTBD19C9JJ37 291 aa4.39□□□□□ -1.71
PMS1-215ENST00000447232 GPR37L1O60883 481 aa4.39□□□□□ -1.71
PMS1-215ENST00000447232 MRPS5P82675 430 aaKnown RBP4.39□□□□□ -1.71
PMS1-215ENST00000447232 NEUROD2Q15784 382 aa4.39□□□□□ -1.71
PMS1-215ENST00000447232 DACT2Q5SW24 774 aa4.39□□□□□ -1.71
PMS1-215ENST00000447232 KIF6Q6ZMV9 814 aa4.39□□□□□ -1.71
PMS1-215ENST00000447232 PODNQ7Z5L7 613 aa4.39□□□□□ -1.71
PMS1-215ENST00000447232 OGFOD1Q8N543 542 aa4.39□□□□□ -1.71
PMS1-215ENST00000447232 INSM2Q96T92 566 aaPredicted RBP4.39□□□□□ -1.71
PMS1-215ENST00000447232 C11orf49Q9H6J7 331 aa4.39□□□□□ -1.71
PMS1-215ENST00000447232 ZNF395Q9H8N7 513 aaPredicted RBP4.39□□□□□ -1.71
PMS1-215ENST00000447232 LTBP2Q14767 1821 aa4.39□□□□□ -1.71
PMS1-215ENST00000447232 ZNF804BA4D1E1 1349 aa4.38□□□□□ -1.71
PMS1-215ENST00000447232 ADCY3O60266 1144 aa4.38□□□□□ -1.71
PMS1-215ENST00000447232 WDHD1O75717 1129 aaPredicted RBP4.38□□□□□ -1.71
PMS1-215ENST00000447232 RAB15P59190 212 aa4.38□□□□□ -1.71
PMS1-215ENST00000447232 SUPT20HL1Q3ZLR7 823 aa4.38□□□□□ -1.71
PMS1-215ENST00000447232 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.38□□□□□ -1.71
PMS1-215ENST00000447232 NGEFQ8N5V2 710 aa4.38□□□□□ -1.71
PMS1-215ENST00000447232 CCDC155Q8N6L0 562 aa4.38□□□□□ -1.71
PMS1-215ENST00000447232 NECAB3Q96P71 396 aaPredicted RBP4.38□□□□□ -1.71
PMS1-215ENST00000447232 GABRQQ9UN88 632 aa4.38□□□□□ -1.71
PMS1-215ENST00000447232 MYO3BQ8WXR4 1341 aa4.38□□□□□ -1.71
PMS1-215ENST00000447232 SLC35F4A4IF30 521 aa4.38□□□□□ -1.71
PMS1-215ENST00000447232 ELNP15502 786 aa4.38□□□□□ -1.71
PMS1-215ENST00000447232 KRT76Q01546 638 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms